BLASTX nr result

ID: Coptis21_contig00025522 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00025522
         (354 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI25069.3| unnamed protein product [Vitis vinifera]               94   9e-18
ref|XP_002268443.2| PREDICTED: transcription factor bHLH25-like ...    94   9e-18
ref|XP_002313947.1| predicted protein [Populus trichocarpa] gi|2...    93   2e-17
ref|XP_004136916.1| PREDICTED: transcription factor bHLH25-like ...    91   7e-17
ref|XP_002528911.1| DNA binding protein, putative [Ricinus commu...    88   8e-16

>emb|CBI25069.3| unnamed protein product [Vitis vinifera]
          Length = 344

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 56/114 (49%), Positives = 73/114 (64%), Gaps = 18/114 (15%)
 Frame = +3

Query: 66  YGNLIGLKRPKEETESIEYMTFDPSDIVISQG-----------SRGSQGVLSTT------ 194
           Y N + + +PKEE  S +     PSD ++SQG           S+G++ + +TT      
Sbjct: 109 YTNQVPVVKPKEEAVSSKSSATFPSDGLVSQGLFENQNYVFKASQGAKRISTTTARHSQT 168

Query: 195 -EHALAERVRREKLSQHFTALSSLVPGLTKMDKASVLGTAIKYLKKLEERAKML 353
            +H +AER RREKLSQ F ALS++VPGL KMDKASVLG AIKYLK+L+ER K L
Sbjct: 169 QDHIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQERVKTL 222


>ref|XP_002268443.2| PREDICTED: transcription factor bHLH25-like [Vitis vinifera]
           gi|147839680|emb|CAN75020.1| hypothetical protein
           VITISV_039940 [Vitis vinifera]
          Length = 331

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 56/114 (49%), Positives = 73/114 (64%), Gaps = 18/114 (15%)
 Frame = +3

Query: 66  YGNLIGLKRPKEETESIEYMTFDPSDIVISQG-----------SRGSQGVLSTT------ 194
           Y N + + +PKEE  S +     PSD ++SQG           S+G++ + +TT      
Sbjct: 96  YTNQVPVVKPKEEAVSSKSSATFPSDGLVSQGLFENQNYVFKASQGAKRISTTTARHSQT 155

Query: 195 -EHALAERVRREKLSQHFTALSSLVPGLTKMDKASVLGTAIKYLKKLEERAKML 353
            +H +AER RREKLSQ F ALS++VPGL KMDKASVLG AIKYLK+L+ER K L
Sbjct: 156 QDHIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQERVKTL 209


>ref|XP_002313947.1| predicted protein [Populus trichocarpa] gi|222850355|gb|EEE87902.1|
           predicted protein [Populus trichocarpa]
          Length = 324

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 54/114 (47%), Positives = 70/114 (61%), Gaps = 18/114 (15%)
 Frame = +3

Query: 66  YGNLIGLKRPKEETESIEYMTFDPSDIVISQGSRGSQGVL------------------ST 191
           + N +GL +PKEE    + +   PSD+V+SQ   GSQ  +                   +
Sbjct: 86  HANQMGLVKPKEEAVCSKSINNFPSDMVVSQDIFGSQNYVIKGCQGPERISTNTPRLSQS 145

Query: 192 TEHALAERVRREKLSQHFTALSSLVPGLTKMDKASVLGTAIKYLKKLEERAKML 353
            +H +AER RREKLSQ F ALS++VPGL KMDKASVLG AIKYLK+L+E+ K L
Sbjct: 146 QDHIIAERKRREKLSQRFIALSAVVPGLKKMDKASVLGDAIKYLKQLQEKVKTL 199


>ref|XP_004136916.1| PREDICTED: transcription factor bHLH25-like [Cucumis sativus]
           gi|449511253|ref|XP_004163905.1| PREDICTED:
           transcription factor bHLH25-like [Cucumis sativus]
          Length = 340

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 55/117 (47%), Positives = 69/117 (58%), Gaps = 17/117 (14%)
 Frame = +3

Query: 54  SQKYYGNLIGLKRPKEETESIEYMTFDPSDIVISQGSRGSQG-----------------V 182
           S   Y N +   RPKEE    + ++  PSD++ISQ S   Q                  +
Sbjct: 107 SASNYMNQMDFSRPKEEVVCPQSISNLPSDMLISQDSLAHQSHTTKSNRGTRSPSRNSRI 166

Query: 183 LSTTEHALAERVRREKLSQHFTALSSLVPGLTKMDKASVLGTAIKYLKKLEERAKML 353
               +H LAER RREKLSQ F ALS++VPGL KMDKASVLG AIKYLK+L+E+ K+L
Sbjct: 167 PQAQDHILAERRRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQEKVKIL 223


>ref|XP_002528911.1| DNA binding protein, putative [Ricinus communis]
           gi|223531665|gb|EEF33491.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 331

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 57/119 (47%), Positives = 69/119 (57%), Gaps = 18/119 (15%)
 Frame = +3

Query: 51  NSQKYYGNLIGLKRPKEETESIEYMTFDP-----------SDIVISQGSRGSQGVLSTT- 194
           NSQ++Y       +PK+E  S   M F P            DI   QG   ++   S T 
Sbjct: 95  NSQRFY------MKPKDEAASPRNMHFQPVISRPPYDIQNHDIKTIQGITNNKRPYSVTR 148

Query: 195 ------EHALAERVRREKLSQHFTALSSLVPGLTKMDKASVLGTAIKYLKKLEERAKML 353
                 +H LAER RREKLSQ F ALS+LVPGL KMDKASVLG AIK++K+L+ER KML
Sbjct: 149 TASHAQDHILAERKRREKLSQRFIALSALVPGLKKMDKASVLGDAIKHVKQLQERVKML 207


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