BLASTX nr result
ID: Coptis21_contig00025510
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00025510 (370 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002282114.1| PREDICTED: uncharacterized protein LOC100249... 97 1e-18 emb|CBI23718.3| unnamed protein product [Vitis vinifera] 97 1e-18 emb|CAN66082.1| hypothetical protein VITISV_028832 [Vitis vinifera] 97 1e-18 ref|XP_002312604.1| predicted protein [Populus trichocarpa] gi|2... 88 6e-16 ref|XP_002528354.1| conserved hypothetical protein [Ricinus comm... 87 2e-15 >ref|XP_002282114.1| PREDICTED: uncharacterized protein LOC100249317 [Vitis vinifera] Length = 420 Score = 97.4 bits (241), Expect = 1e-18 Identities = 49/74 (66%), Positives = 56/74 (75%) Frame = +3 Query: 144 MWRRLSLTITSKTSNLRFFSTASRRNGSLIEDEGDWFYSSEWWGTYSEGHTVFRSSSDKG 323 MW R L TSK LR FSTA R++ IEDEGDWFYSSEWWG S+GHTV RS+SDKG Sbjct: 3 MWHRARLCSTSK---LRNFSTAVRQH---IEDEGDWFYSSEWWGDQSDGHTVLRSTSDKG 56 Query: 324 NGIVSVVSHPCSKP 365 NG+VSVV+H S+P Sbjct: 57 NGVVSVVAHHSSRP 70 >emb|CBI23718.3| unnamed protein product [Vitis vinifera] Length = 418 Score = 97.4 bits (241), Expect = 1e-18 Identities = 49/74 (66%), Positives = 56/74 (75%) Frame = +3 Query: 144 MWRRLSLTITSKTSNLRFFSTASRRNGSLIEDEGDWFYSSEWWGTYSEGHTVFRSSSDKG 323 MW R L TSK LR FSTA R++ IEDEGDWFYSSEWWG S+GHTV RS+SDKG Sbjct: 1 MWHRARLCSTSK---LRNFSTAVRQH---IEDEGDWFYSSEWWGDQSDGHTVLRSTSDKG 54 Query: 324 NGIVSVVSHPCSKP 365 NG+VSVV+H S+P Sbjct: 55 NGVVSVVAHHSSRP 68 >emb|CAN66082.1| hypothetical protein VITISV_028832 [Vitis vinifera] Length = 418 Score = 97.4 bits (241), Expect = 1e-18 Identities = 49/74 (66%), Positives = 56/74 (75%) Frame = +3 Query: 144 MWRRLSLTITSKTSNLRFFSTASRRNGSLIEDEGDWFYSSEWWGTYSEGHTVFRSSSDKG 323 MW R L TSK LR FSTA R++ IEDEGDWFYSSEWWG S+GHTV RS+SDKG Sbjct: 1 MWHRARLCSTSK---LRNFSTAVRQH---IEDEGDWFYSSEWWGDQSDGHTVLRSTSDKG 54 Query: 324 NGIVSVVSHPCSKP 365 NG+VSVV+H S+P Sbjct: 55 NGVVSVVAHHSSRP 68 >ref|XP_002312604.1| predicted protein [Populus trichocarpa] gi|222852424|gb|EEE89971.1| predicted protein [Populus trichocarpa] Length = 431 Score = 88.2 bits (217), Expect = 6e-16 Identities = 44/74 (59%), Positives = 52/74 (70%) Frame = +3 Query: 144 MWRRLSLTITSKTSNLRFFSTASRRNGSLIEDEGDWFYSSEWWGTYSEGHTVFRSSSDKG 323 MW R L T R TA+RR I+DEGDWFYSSEWWGT ++GHTV RS SDKG Sbjct: 1 MWHRARLIST------RRLCTATRR---CIDDEGDWFYSSEWWGTCTDGHTVLRSPSDKG 51 Query: 324 NGIVSVVSHPCSKP 365 NGIVSV+++P S+P Sbjct: 52 NGIVSVLAYPSSRP 65 >ref|XP_002528354.1| conserved hypothetical protein [Ricinus communis] gi|223532222|gb|EEF34026.1| conserved hypothetical protein [Ricinus communis] Length = 434 Score = 86.7 bits (213), Expect = 2e-15 Identities = 45/79 (56%), Positives = 55/79 (69%), Gaps = 5/79 (6%) Frame = +3 Query: 144 MWRRLSLTITSKTSNLRFFSTASRRNGSLIEDEGDWFYSSEWWGT-----YSEGHTVFRS 308 MW R L S N+R F TA+RR I+DEGDWFYSSEWWGT S GHTV RS Sbjct: 1 MWYRTKL---SSRWNIRKFCTAARRR---IDDEGDWFYSSEWWGTDSSSSSSNGHTVLRS 54 Query: 309 SSDKGNGIVSVVSHPCSKP 365 +S++GNG+VSVV++P S+P Sbjct: 55 TSNRGNGVVSVVAYPSSRP 73