BLASTX nr result

ID: Coptis21_contig00025510 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00025510
         (370 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282114.1| PREDICTED: uncharacterized protein LOC100249...    97   1e-18
emb|CBI23718.3| unnamed protein product [Vitis vinifera]               97   1e-18
emb|CAN66082.1| hypothetical protein VITISV_028832 [Vitis vinifera]    97   1e-18
ref|XP_002312604.1| predicted protein [Populus trichocarpa] gi|2...    88   6e-16
ref|XP_002528354.1| conserved hypothetical protein [Ricinus comm...    87   2e-15

>ref|XP_002282114.1| PREDICTED: uncharacterized protein LOC100249317 [Vitis vinifera]
          Length = 420

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 49/74 (66%), Positives = 56/74 (75%)
 Frame = +3

Query: 144 MWRRLSLTITSKTSNLRFFSTASRRNGSLIEDEGDWFYSSEWWGTYSEGHTVFRSSSDKG 323
           MW R  L  TSK   LR FSTA R++   IEDEGDWFYSSEWWG  S+GHTV RS+SDKG
Sbjct: 3   MWHRARLCSTSK---LRNFSTAVRQH---IEDEGDWFYSSEWWGDQSDGHTVLRSTSDKG 56

Query: 324 NGIVSVVSHPCSKP 365
           NG+VSVV+H  S+P
Sbjct: 57  NGVVSVVAHHSSRP 70


>emb|CBI23718.3| unnamed protein product [Vitis vinifera]
          Length = 418

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 49/74 (66%), Positives = 56/74 (75%)
 Frame = +3

Query: 144 MWRRLSLTITSKTSNLRFFSTASRRNGSLIEDEGDWFYSSEWWGTYSEGHTVFRSSSDKG 323
           MW R  L  TSK   LR FSTA R++   IEDEGDWFYSSEWWG  S+GHTV RS+SDKG
Sbjct: 1   MWHRARLCSTSK---LRNFSTAVRQH---IEDEGDWFYSSEWWGDQSDGHTVLRSTSDKG 54

Query: 324 NGIVSVVSHPCSKP 365
           NG+VSVV+H  S+P
Sbjct: 55  NGVVSVVAHHSSRP 68


>emb|CAN66082.1| hypothetical protein VITISV_028832 [Vitis vinifera]
          Length = 418

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 49/74 (66%), Positives = 56/74 (75%)
 Frame = +3

Query: 144 MWRRLSLTITSKTSNLRFFSTASRRNGSLIEDEGDWFYSSEWWGTYSEGHTVFRSSSDKG 323
           MW R  L  TSK   LR FSTA R++   IEDEGDWFYSSEWWG  S+GHTV RS+SDKG
Sbjct: 1   MWHRARLCSTSK---LRNFSTAVRQH---IEDEGDWFYSSEWWGDQSDGHTVLRSTSDKG 54

Query: 324 NGIVSVVSHPCSKP 365
           NG+VSVV+H  S+P
Sbjct: 55  NGVVSVVAHHSSRP 68


>ref|XP_002312604.1| predicted protein [Populus trichocarpa] gi|222852424|gb|EEE89971.1|
           predicted protein [Populus trichocarpa]
          Length = 431

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 44/74 (59%), Positives = 52/74 (70%)
 Frame = +3

Query: 144 MWRRLSLTITSKTSNLRFFSTASRRNGSLIEDEGDWFYSSEWWGTYSEGHTVFRSSSDKG 323
           MW R  L  T      R   TA+RR    I+DEGDWFYSSEWWGT ++GHTV RS SDKG
Sbjct: 1   MWHRARLIST------RRLCTATRR---CIDDEGDWFYSSEWWGTCTDGHTVLRSPSDKG 51

Query: 324 NGIVSVVSHPCSKP 365
           NGIVSV+++P S+P
Sbjct: 52  NGIVSVLAYPSSRP 65


>ref|XP_002528354.1| conserved hypothetical protein [Ricinus communis]
           gi|223532222|gb|EEF34026.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 434

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 45/79 (56%), Positives = 55/79 (69%), Gaps = 5/79 (6%)
 Frame = +3

Query: 144 MWRRLSLTITSKTSNLRFFSTASRRNGSLIEDEGDWFYSSEWWGT-----YSEGHTVFRS 308
           MW R  L   S   N+R F TA+RR    I+DEGDWFYSSEWWGT      S GHTV RS
Sbjct: 1   MWYRTKL---SSRWNIRKFCTAARRR---IDDEGDWFYSSEWWGTDSSSSSSNGHTVLRS 54

Query: 309 SSDKGNGIVSVVSHPCSKP 365
           +S++GNG+VSVV++P S+P
Sbjct: 55  TSNRGNGVVSVVAYPSSRP 73


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