BLASTX nr result
ID: Coptis21_contig00025504
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00025504 (259 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002266465.2| PREDICTED: filament-like plant protein 4-lik... 49 2e-09 ref|XP_002510512.1| Myosin heavy chain, striated muscle, putativ... 52 3e-08 ref|XP_003550417.1| PREDICTED: filament-like plant protein 6-lik... 42 8e-06 >ref|XP_002266465.2| PREDICTED: filament-like plant protein 4-like [Vitis vinifera] Length = 1059 Score = 48.5 bits (114), Expect(2) = 2e-09 Identities = 27/59 (45%), Positives = 39/59 (66%), Gaps = 1/59 (1%) Frame = +2 Query: 2 KISLGDFILNLSIVLAKASELSIYLFSSKSSQGENIS-DSVDRVTLLEIKVVQNDSFRE 175 K+SL +F L LS +L KASEL + K +GE + D +D+V LLE KVV+++S R+ Sbjct: 672 KLSLVEFFLGLSHILIKASELKSSVLDCKGHEGETTTFDCIDKVALLENKVVKDESSRQ 730 Score = 38.1 bits (87), Expect(2) = 2e-09 Identities = 17/22 (77%), Positives = 19/22 (86%) Frame = +3 Query: 192 CAHISHSTSDPEILQEGSLSPG 257 C + SHSTSDPEILQE +LSPG Sbjct: 736 CDYNSHSTSDPEILQEENLSPG 757 >ref|XP_002510512.1| Myosin heavy chain, striated muscle, putative [Ricinus communis] gi|223551213|gb|EEF52699.1| Myosin heavy chain, striated muscle, putative [Ricinus communis] Length = 1041 Score = 51.6 bits (122), Expect(2) = 3e-08 Identities = 34/68 (50%), Positives = 42/68 (61%), Gaps = 1/68 (1%) Frame = +2 Query: 8 SLGDFILNLSIVLAKASELSIYLFSSKSSQGE-NISDSVDRVTLLEIKVVQNDSFREVC* 184 SL DFI LS VLAKASEL + K S+ E N SD +D+V L E KV+Q DS E Sbjct: 661 SLIDFIFYLSCVLAKASELRFNVLGYKGSEAEINSSDCIDKVALPENKVLQRDSSGESY- 719 Query: 185 RSLCSHFS 208 ++ C+H S Sbjct: 720 QNSCAHIS 727 Score = 30.8 bits (68), Expect(2) = 3e-08 Identities = 13/22 (59%), Positives = 16/22 (72%) Frame = +3 Query: 192 CAHISHSTSDPEILQEGSLSPG 257 CAHIS TS+PE+ +GSL G Sbjct: 723 CAHISSPTSNPEVPDDGSLVSG 744 >ref|XP_003550417.1| PREDICTED: filament-like plant protein 6-like [Glycine max] Length = 1076 Score = 41.6 bits (96), Expect(2) = 8e-06 Identities = 25/57 (43%), Positives = 35/57 (61%), Gaps = 1/57 (1%) Frame = +2 Query: 8 SLGDFILNLSIVLAKASELSIYLFSSKSSQGE-NISDSVDRVTLLEIKVVQNDSFRE 175 SL F+L+LS VLAKASE + K + E N D +D++ L E K+VQ++S E Sbjct: 710 SLLQFVLDLSNVLAKASEFRFNILGYKGREAETNSPDCIDKIALPENKLVQDNSSGE 766 Score = 32.7 bits (73), Expect(2) = 8e-06 Identities = 16/29 (55%), Positives = 21/29 (72%) Frame = +3 Query: 171 ERFANDRCAHISHSTSDPEILQEGSLSPG 257 ERF N R +HI + SDPEI +G+L+PG Sbjct: 766 ERFQNGR-SHILNPCSDPEIPDDGNLAPG 793