BLASTX nr result

ID: Coptis21_contig00025504 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00025504
         (259 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266465.2| PREDICTED: filament-like plant protein 4-lik...    49   2e-09
ref|XP_002510512.1| Myosin heavy chain, striated muscle, putativ...    52   3e-08
ref|XP_003550417.1| PREDICTED: filament-like plant protein 6-lik...    42   8e-06

>ref|XP_002266465.2| PREDICTED: filament-like plant protein 4-like [Vitis vinifera]
          Length = 1059

 Score = 48.5 bits (114), Expect(2) = 2e-09
 Identities = 27/59 (45%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
 Frame = +2

Query: 2   KISLGDFILNLSIVLAKASELSIYLFSSKSSQGENIS-DSVDRVTLLEIKVVQNDSFRE 175
           K+SL +F L LS +L KASEL   +   K  +GE  + D +D+V LLE KVV+++S R+
Sbjct: 672 KLSLVEFFLGLSHILIKASELKSSVLDCKGHEGETTTFDCIDKVALLENKVVKDESSRQ 730



 Score = 38.1 bits (87), Expect(2) = 2e-09
 Identities = 17/22 (77%), Positives = 19/22 (86%)
 Frame = +3

Query: 192 CAHISHSTSDPEILQEGSLSPG 257
           C + SHSTSDPEILQE +LSPG
Sbjct: 736 CDYNSHSTSDPEILQEENLSPG 757


>ref|XP_002510512.1| Myosin heavy chain, striated muscle, putative [Ricinus communis]
           gi|223551213|gb|EEF52699.1| Myosin heavy chain, striated
           muscle, putative [Ricinus communis]
          Length = 1041

 Score = 51.6 bits (122), Expect(2) = 3e-08
 Identities = 34/68 (50%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
 Frame = +2

Query: 8   SLGDFILNLSIVLAKASELSIYLFSSKSSQGE-NISDSVDRVTLLEIKVVQNDSFREVC* 184
           SL DFI  LS VLAKASEL   +   K S+ E N SD +D+V L E KV+Q DS  E   
Sbjct: 661 SLIDFIFYLSCVLAKASELRFNVLGYKGSEAEINSSDCIDKVALPENKVLQRDSSGESY- 719

Query: 185 RSLCSHFS 208
           ++ C+H S
Sbjct: 720 QNSCAHIS 727



 Score = 30.8 bits (68), Expect(2) = 3e-08
 Identities = 13/22 (59%), Positives = 16/22 (72%)
 Frame = +3

Query: 192 CAHISHSTSDPEILQEGSLSPG 257
           CAHIS  TS+PE+  +GSL  G
Sbjct: 723 CAHISSPTSNPEVPDDGSLVSG 744


>ref|XP_003550417.1| PREDICTED: filament-like plant protein 6-like [Glycine max]
          Length = 1076

 Score = 41.6 bits (96), Expect(2) = 8e-06
 Identities = 25/57 (43%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
 Frame = +2

Query: 8   SLGDFILNLSIVLAKASELSIYLFSSKSSQGE-NISDSVDRVTLLEIKVVQNDSFRE 175
           SL  F+L+LS VLAKASE    +   K  + E N  D +D++ L E K+VQ++S  E
Sbjct: 710 SLLQFVLDLSNVLAKASEFRFNILGYKGREAETNSPDCIDKIALPENKLVQDNSSGE 766



 Score = 32.7 bits (73), Expect(2) = 8e-06
 Identities = 16/29 (55%), Positives = 21/29 (72%)
 Frame = +3

Query: 171 ERFANDRCAHISHSTSDPEILQEGSLSPG 257
           ERF N R +HI +  SDPEI  +G+L+PG
Sbjct: 766 ERFQNGR-SHILNPCSDPEIPDDGNLAPG 793


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