BLASTX nr result

ID: Coptis21_contig00025486 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00025486
         (1898 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26850.3| unnamed protein product [Vitis vinifera]              801   0.0  
ref|XP_003631173.1| PREDICTED: LOW QUALITY PROTEIN: glucan endo-...   789   0.0  
ref|XP_002527772.1| Glucan endo-1,3-beta-glucosidase precursor, ...   773   0.0  
ref|XP_002314794.1| predicted protein [Populus trichocarpa] gi|2...   759   0.0  
ref|XP_002312452.1| predicted protein [Populus trichocarpa] gi|2...   752   0.0  

>emb|CBI26850.3| unnamed protein product [Vitis vinifera]
          Length = 498

 Score =  801 bits (2069), Expect = 0.0
 Identities = 394/494 (79%), Positives = 431/494 (87%), Gaps = 2/494 (0%)
 Frame = +2

Query: 212  LLILLFGVFAVSADEDAFIGVNIGTDLSDMPNPTQVVALLKSQQIRHVRLYDADRAMLLA 391
            L +LL  V    ADEDAFIGVNIGTDLS+MPNPTQVVALLKSQQIRHVRLYDADRAMLLA
Sbjct: 5    LFLLLLVVSGTVADEDAFIGVNIGTDLSNMPNPTQVVALLKSQQIRHVRLYDADRAMLLA 64

Query: 392  LANSGIHVTISVPNNELLGVGQSNATAANWVARNVAAHVPATNITGIAVGSEVLTTLPNA 571
            LAN+GI VT+SVPN++LLG+GQSNATAANWVARNV AH+PATNIT IAVGSEVLTTLPNA
Sbjct: 65   LANTGIRVTVSVPNDQLLGIGQSNATAANWVARNVLAHIPATNITAIAVGSEVLTTLPNA 124

Query: 572  APVLVSALKFIQSALVASNLDDQIKVSTPHSSSIILDSFPPSQAFFNRSWDPVMVPLLKF 751
            APVLVSALKFI SALVA+NLD QIKVSTPHSSSI+LDSFPPSQAFFNRSW+PVMVPLLKF
Sbjct: 125  APVLVSALKFIHSALVAANLDSQIKVSTPHSSSILLDSFPPSQAFFNRSWEPVMVPLLKF 184

Query: 752  LQTTGSPLLLNVYPYYDYMQSNDVIPLDYALFRPLPPNKEAVDSNTLLHYSNVXXXXXXX 931
            LQ+T S L+LNVYPYYDYMQSN VIPLDYALFRPLPPNKEAVD+NTLLHY+NV       
Sbjct: 185  LQSTSSYLMLNVYPYYDYMQSNSVIPLDYALFRPLPPNKEAVDANTLLHYTNVFDAVVDA 244

Query: 932  XXXXXXXLNFTNIPIVVLETGWPSKGDPSEPDATIENANTYNSNLIRHVLNSTGTPKHPG 1111
                   LNFTNIP+VVLE+GWPSKG  SEPDATI+NANTYNSNLIRHVLN+TGTPKHPG
Sbjct: 245  AFFAMSYLNFTNIPLVVLESGWPSKGGSSEPDATIDNANTYNSNLIRHVLNNTGTPKHPG 304

Query: 1112 IAVSTYIYELYNEDTKPGPLSEKNWGLFDENGLPVYIMRLTGSGLVLANDTTNQTFCTAK 1291
            IAVSTYIYELYNED +PG +SEKNWGLFD NG+PVYI+ LTGSG VLANDTTNQT+C A+
Sbjct: 305  IAVSTYIYELYNEDLRPGSVSEKNWGLFDANGMPVYILHLTGSGTVLANDTTNQTYCVAR 364

Query: 1292 DGSDPKMLQAALDWACGPGKVDCSALKQGQPCYEPDNVVSHASYAFDAYYHLMGMASGTC 1471
            DG+DPKMLQAALDWACGPGKVDCS L QGQPC EPDNVV+HA+YAFDAYYH M M  GTC
Sbjct: 365  DGADPKMLQAALDWACGPGKVDCSPLLQGQPCSEPDNVVAHATYAFDAYYHQMAMGQGTC 424

Query: 1472 YFNGVAAISTTDPSHSSCLFPGSGGRNGTFLNSTTLAPSSNSTASGSIPLLYRVN--VRS 1645
            YFNGVA I+TTDPSH SC FPGS GRN TF+N T+LAPSSNST+SGS    +  +  + S
Sbjct: 425  YFNGVATITTTDPSHGSCKFPGSAGRNNTFINGTSLAPSSNSTSSGSQSQYFYSSGALMS 484

Query: 1646 FLVIGGLFWSAVFL 1687
             ++IG L WSAV L
Sbjct: 485  CMIIGILVWSAVLL 498


>ref|XP_003631173.1| PREDICTED: LOW QUALITY PROTEIN: glucan endo-1,3-beta-glucosidase
            3-like [Vitis vinifera]
          Length = 538

 Score =  789 bits (2038), Expect = 0.0
 Identities = 392/499 (78%), Positives = 430/499 (86%), Gaps = 2/499 (0%)
 Frame = +2

Query: 197  MGVFSLLILLFGVFAVSADEDAFIGVNIGTDLSDMPNPTQVVALLKSQQIRHVRLYDADR 376
            M V SLL +L  +        AFIGVNIGTDLS+MPNPTQVVALLKSQQIRHVRLYDADR
Sbjct: 46   MKVSSLLPVLASIIY------AFIGVNIGTDLSNMPNPTQVVALLKSQQIRHVRLYDADR 99

Query: 377  AMLLALANSGIHVTISVPNNELLGVGQSNATAANWVARNVAAHVPATNITGIAVGSEVLT 556
            AMLLALAN+GI VT+SVPN++LLG+GQSNATAANWVARNV AH+PATNIT IAVGSEVLT
Sbjct: 100  AMLLALANTGIRVTVSVPNDQLLGIGQSNATAANWVARNVLAHIPATNITAIAVGSEVLT 159

Query: 557  TLPNAAPVLVSALKFIQSALVASNLDDQIKVSTPHSSSIILDSFPPSQAFFNRSWDPVMV 736
            TLPNAAPVLVSALKFI SALVA+NLD QIKVSTPHSSSI+LDSFPPSQAFFNRSW+PVMV
Sbjct: 160  TLPNAAPVLVSALKFIHSALVAANLDSQIKVSTPHSSSILLDSFPPSQAFFNRSWEPVMV 219

Query: 737  PLLKFLQTTGSPLLLNVYPYYDYMQSNDVIPLDYALFRPLPPNKEAVDSNTLLHYSNVXX 916
            PLLKFLQ+T S L+LNVYPYYDYMQSN VIPLDYALFRPLPPNKEAVD+NTLLHY+NV  
Sbjct: 220  PLLKFLQSTSSYLMLNVYPYYDYMQSNSVIPLDYALFRPLPPNKEAVDANTLLHYTNVFD 279

Query: 917  XXXXXXXXXXXXLNFTNIPIVVLETGWPSKGDPSEPDATIENANTYNSNLIRHVLNSTGT 1096
                        LNFTNIP+VVLE+GWPSKG  SEPDATI+NANTYNSNLIRHVLN+TGT
Sbjct: 280  AVVDAAFFAMSYLNFTNIPLVVLESGWPSKGGSSEPDATIDNANTYNSNLIRHVLNNTGT 339

Query: 1097 PKHPGIAVSTYIYELYNEDTKPGPLSEKNWGLFDENGLPVYIMRLTGSGLVLANDTTNQT 1276
            PKHPGIAVSTYIYELYNED +PG +SEKNWGLFD NG+PVYI+ LTGSG VLANDTTNQT
Sbjct: 340  PKHPGIAVSTYIYELYNEDLRPGSVSEKNWGLFDANGMPVYILHLTGSGTVLANDTTNQT 399

Query: 1277 FCTAKDGSDPKMLQAALDWACGPGKVDCSALKQGQPCYEPDNVVSHASYAFDAYYHLMGM 1456
            +C A+DG+DPKMLQAALDWACGPGKVDCS L QGQPC EPDNVV+HA+YAFDAYYH M M
Sbjct: 400  YCVARDGADPKMLQAALDWACGPGKVDCSPLLQGQPCSEPDNVVAHATYAFDAYYHQMAM 459

Query: 1457 ASGTCYFNGVAAISTTDPSHSSCLFPGSGGRNGTFLNSTTLAPSSNSTASGSIPLLYRVN 1636
              GTCYFNGVA I+TTDPSH SC FPGS GRN TF+N T+LAPSSNST+SGS    +  +
Sbjct: 460  GQGTCYFNGVATITTTDPSHGSCKFPGSAGRNNTFINGTSLAPSSNSTSSGSQSQYFYSS 519

Query: 1637 --VRSFLVIGGLFWSAVFL 1687
              + S ++IG L WSAV L
Sbjct: 520  GALMSCMIIGILVWSAVLL 538


>ref|XP_002527772.1| Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus
            communis] gi|223532807|gb|EEF34582.1| Glucan
            endo-1,3-beta-glucosidase precursor, putative [Ricinus
            communis]
          Length = 533

 Score =  773 bits (1995), Expect = 0.0
 Identities = 378/468 (80%), Positives = 414/468 (88%), Gaps = 2/468 (0%)
 Frame = +2

Query: 215  LILLFGVFA--VSADEDAFIGVNIGTDLSDMPNPTQVVALLKSQQIRHVRLYDADRAMLL 388
            L LLF V A   SADED+FIGVN+GT LSDMP+PTQVVALLK+Q IRHVRLYDADRAMLL
Sbjct: 4    LFLLFLVMASATSADEDSFIGVNVGTALSDMPSPTQVVALLKAQNIRHVRLYDADRAMLL 63

Query: 389  ALANSGIHVTISVPNNELLGVGQSNATAANWVARNVAAHVPATNITGIAVGSEVLTTLPN 568
            ALAN+GI VT+SVPN +LLG+GQSNATAANWVARNV AHVPATNIT IAVGSEVLTTLPN
Sbjct: 64   ALANTGIRVTVSVPNEQLLGIGQSNATAANWVARNVIAHVPATNITAIAVGSEVLTTLPN 123

Query: 569  AAPVLVSALKFIQSALVASNLDDQIKVSTPHSSSIILDSFPPSQAFFNRSWDPVMVPLLK 748
            AAPVLVSALKFI SALVASNLD QIKVSTPHSSSIILDSFPPSQAFFNR+WDPVMVPLLK
Sbjct: 124  AAPVLVSALKFIHSALVASNLDGQIKVSTPHSSSIILDSFPPSQAFFNRTWDPVMVPLLK 183

Query: 749  FLQTTGSPLLLNVYPYYDYMQSNDVIPLDYALFRPLPPNKEAVDSNTLLHYSNVXXXXXX 928
            FLQ+TGS  ++NVYPYYDYMQSN VIPLDYALFRPLPPNKEAVD+NTLLHY+NV      
Sbjct: 184  FLQSTGSYFMINVYPYYDYMQSNGVIPLDYALFRPLPPNKEAVDANTLLHYTNVFDALVD 243

Query: 929  XXXXXXXXLNFTNIPIVVLETGWPSKGDPSEPDATIENANTYNSNLIRHVLNSTGTPKHP 1108
                    LNFTN+PIVV E+GWPSKGD +EPDATIENANTYNSNLIRHVLN+TGTPKHP
Sbjct: 244  AAYFAMSYLNFTNVPIVVTESGWPSKGDSAEPDATIENANTYNSNLIRHVLNNTGTPKHP 303

Query: 1109 GIAVSTYIYELYNEDTKPGPLSEKNWGLFDENGLPVYIMRLTGSGLVLANDTTNQTFCTA 1288
            GIAVSTYIYELYNED +PGP SEKNWGLF  NG+PVYI+ LTG+G VLANDTTNQTFC A
Sbjct: 304  GIAVSTYIYELYNEDLRPGPASEKNWGLFYANGVPVYILHLTGAGTVLANDTTNQTFCVA 363

Query: 1289 KDGSDPKMLQAALDWACGPGKVDCSALKQGQPCYEPDNVVSHASYAFDAYYHLMGMASGT 1468
            K+G+DPKMLQAALDWACGPGKVDCSA+ QGQPCYEPDNVV+H++YAF+AY+  M  + GT
Sbjct: 364  KEGADPKMLQAALDWACGPGKVDCSAMLQGQPCYEPDNVVAHSTYAFNAYFQRMAKSPGT 423

Query: 1469 CYFNGVAAISTTDPSHSSCLFPGSGGRNGTFLNSTTLAPSSNSTASGS 1612
            C F GVA I+TTDPSH SC+FPGS GRNGT  N+T+LAPSSNST+S S
Sbjct: 424  CDFKGVATITTTDPSHGSCIFPGSAGRNGTLTNTTSLAPSSNSTSSDS 471


>ref|XP_002314794.1| predicted protein [Populus trichocarpa] gi|222863834|gb|EEF00965.1|
            predicted protein [Populus trichocarpa]
          Length = 493

 Score =  759 bits (1959), Expect = 0.0
 Identities = 375/493 (76%), Positives = 420/493 (85%), Gaps = 2/493 (0%)
 Frame = +2

Query: 215  LILLFGVFAVSADEDAFIGVNIGTDLSDMPNPTQVVALLKSQQIRHVRLYDADRAMLLAL 394
            ++LL   F++S   DAFIGVNIGT LSDMP+PTQVVALLK+Q IRHVRLYDADRAML AL
Sbjct: 1    ILLLNCFFSLSRLPDAFIGVNIGTALSDMPSPTQVVALLKAQNIRHVRLYDADRAMLHAL 60

Query: 395  ANSGIHVTISVPNNELLGVGQSNATAANWVARNVAAHVPATNITGIAVGSEVLTTLPNAA 574
            AN+GI VT+SVPN +LLG+GQSNATAANWVARNV AHVPATNIT IAVGSE+LTTLPNAA
Sbjct: 61   ANTGIRVTVSVPNEQLLGIGQSNATAANWVARNVIAHVPATNITAIAVGSEILTTLPNAA 120

Query: 575  PVLVSALKFIQSALVASNLDDQIKVSTPHSSSIILDSFPPSQAFFNRSWDPVMVPLLKFL 754
            PVLVSALKFI SALVASNLD QIKVSTP SSSIILDSFPPSQAFFNRSWDPVMVPLLKFL
Sbjct: 121  PVLVSALKFIHSALVASNLDGQIKVSTPQSSSIILDSFPPSQAFFNRSWDPVMVPLLKFL 180

Query: 755  QTTGSPLLLNVYPYYDYMQSNDVIPLDYALFRPLPPNKEAVDSNTLLHYSNVXXXXXXXX 934
            Q+TGS  +LNVYPYYDYMQSN VIPLDYALFRPLPPNKEAVD+NTLLHY+NV        
Sbjct: 181  QSTGSYFMLNVYPYYDYMQSNGVIPLDYALFRPLPPNKEAVDANTLLHYTNVFDAIVDAA 240

Query: 935  XXXXXXLNFTNIPIVVLETGWPSKGDPSEPDATIENANTYNSNLIRHVLNSTGTPKHPGI 1114
                  LNFT IPI V E+GWPSKGD SEPDAT++NANTYNSNLIRHVLN+TGTPKHPGI
Sbjct: 241  YFSMSYLNFTKIPIFVTESGWPSKGDSSEPDATLDNANTYNSNLIRHVLNNTGTPKHPGI 300

Query: 1115 AVSTYIYELYNEDTKPGPLSEKNWGLFDENGLPVYIMRLTGSGLVLANDTTNQTFCTAKD 1294
             VSTYIYELYNED++PGP+SEKNWGLFD NG+PVY + LTG+G +LANDTTNQTFC AK+
Sbjct: 301  VVSTYIYELYNEDSRPGPVSEKNWGLFDANGMPVYTLHLTGAGTLLANDTTNQTFCVAKE 360

Query: 1295 GSDPKMLQAALDWACGPGKVDCSALKQGQPCYEPDNVVSHASYAFDAYYHLMGMASGTCY 1474
            G+DPKMLQAALDWACGPGKVDCS L QGQPCYEPDNVV+H++YAF+AY+  M  + GTC 
Sbjct: 361  GADPKMLQAALDWACGPGKVDCSFLLQGQPCYEPDNVVAHSTYAFNAYFQKMAKSPGTCD 420

Query: 1475 FNGVAAISTTDPSHSSCLFPGSGGRNGTFLNSTTLAPSSNSTASG--SIPLLYRVNVRSF 1648
            F GVA I+T+DPSH SC+FPGS GRNGTF N+T+LAPSSNS+ SG  S+      +  + 
Sbjct: 421  FKGVATITTSDPSHGSCIFPGSAGRNGTFPNTTSLAPSSNSSTSGCHSVYFYGAGSFTTS 480

Query: 1649 LVIGGLFWSAVFL 1687
            ++IG L  S V L
Sbjct: 481  VIIGVLLMSMVCL 493


>ref|XP_002312452.1| predicted protein [Populus trichocarpa] gi|222852272|gb|EEE89819.1|
            predicted protein [Populus trichocarpa]
          Length = 479

 Score =  752 bits (1941), Expect = 0.0
 Identities = 367/479 (76%), Positives = 412/479 (86%), Gaps = 2/479 (0%)
 Frame = +2

Query: 257  DAFIGVNIGTDLSDMPNPTQVVALLKSQQIRHVRLYDADRAMLLALANSGIHVTISVPNN 436
            D FIGVNIGT +SDMP+PTQVVALLK+Q IRHVRLYDADRA+LLALAN+GI VT+SVPN+
Sbjct: 1    DGFIGVNIGTAISDMPSPTQVVALLKAQNIRHVRLYDADRALLLALANTGIRVTVSVPND 60

Query: 437  ELLGVGQSNATAANWVARNVAAHVPATNITGIAVGSEVLTTLPNAAPVLVSALKFIQSAL 616
            ++LG+GQSNATAANWVARNV AHVPATNIT IAVGSE+LTTLPNAAPVLVSALKFI SAL
Sbjct: 61   QILGIGQSNATAANWVARNVIAHVPATNITAIAVGSEILTTLPNAAPVLVSALKFIHSAL 120

Query: 617  VASNLDDQIKVSTPHSSSIILDSFPPSQAFFNRSWDPVMVPLLKFLQTTGSPLLLNVYPY 796
            VASNLD QIKVSTPHSSSIILDSFPPSQAFFNRSWDPVMVPLLKFLQ+TGS  +LN YPY
Sbjct: 121  VASNLDGQIKVSTPHSSSIILDSFPPSQAFFNRSWDPVMVPLLKFLQSTGSYFMLNAYPY 180

Query: 797  YDYMQSNDVIPLDYALFRPLPPNKEAVDSNTLLHYSNVXXXXXXXXXXXXXXLNFTNIPI 976
            YDYMQSN VIPLDYALFRPLPP+KEAVD+NTLLHY+NV              LNFTN+PI
Sbjct: 181  YDYMQSNGVIPLDYALFRPLPPDKEAVDANTLLHYTNVFDAIVDAAYFAMSYLNFTNVPI 240

Query: 977  VVLETGWPSKGDPSEPDATIENANTYNSNLIRHVLNSTGTPKHPGIAVSTYIYELYNEDT 1156
             V E+GWPSKGD SEPDAT+ENANTYNSNLIRHVLN+TGTPKHP IAVSTYIYELYNED 
Sbjct: 241  FVTESGWPSKGDSSEPDATLENANTYNSNLIRHVLNNTGTPKHPKIAVSTYIYELYNEDL 300

Query: 1157 KPGPLSEKNWGLFDENGLPVYIMRLTGSGLVLANDTTNQTFCTAKDGSDPKMLQAALDWA 1336
            +PG +SEKNWGLFD +G+PVY + LTG+G VLANDTTNQTFC AK+G+DPKMLQAALDWA
Sbjct: 301  RPGAISEKNWGLFDADGMPVYTLHLTGAGTVLANDTTNQTFCVAKEGADPKMLQAALDWA 360

Query: 1337 CGPGKVDCSALKQGQPCYEPDNVVSHASYAFDAYYHLMGMASGTCYFNGVAAISTTDPSH 1516
            CGPGKVDCS L QGQPCYEPDNVV+H++YAF+AY+  M  + GTC F GVA I+TTDPSH
Sbjct: 361  CGPGKVDCSYLLQGQPCYEPDNVVAHSTYAFNAYFQKMAKSPGTCDFKGVATITTTDPSH 420

Query: 1517 SSCLFPGSGGRNGTFLNSTTLAPSSNSTASG--SIPLLYRVNVRSFLVIGGLFWSAVFL 1687
             SC+FPGS GRNG+  N+T+LAPSSNST SG  S+ +    +  + ++IG L  S  FL
Sbjct: 421  GSCIFPGSAGRNGSLPNTTSLAPSSNSTTSGCHSVYIYGAGSFTTSVIIGVLLMSVFFL 479