BLASTX nr result

ID: Coptis21_contig00025463 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00025463
         (662 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528465.1| 2-oxoglutarate dehydrogenase, putative [Rici...   279   4e-73
ref|XP_002279332.2| PREDICTED: 2-oxoglutarate dehydrogenase, mit...   271   8e-71
ref|XP_002446307.1| hypothetical protein SORBIDRAFT_06g013940 [S...   265   8e-69
ref|NP_001169698.1| hypothetical protein [Zea mays] gi|224031001...   265   8e-69
emb|CAA11552.1| 2-oxoglutarate dehydrogenase, E1 subunit [Arabid...   264   1e-68

>ref|XP_002528465.1| 2-oxoglutarate dehydrogenase, putative [Ricinus communis]
            gi|223532141|gb|EEF33948.1| 2-oxoglutarate dehydrogenase,
            putative [Ricinus communis]
          Length = 1021

 Score =  279 bits (713), Expect = 4e-73
 Identities = 130/152 (85%), Positives = 147/152 (96%)
 Frame = -3

Query: 660  KQGTRFKRLIKDQSNHSDLEKGIRRLVLCSGKIYYELDEERKRVNGKDVAICRVEQLCPF 481
            KQGTRFKRLIKDQ++HSDLE+GIRRLVLCSGK+YYELDEERK++  KDVAICRVEQLCPF
Sbjct: 870  KQGTRFKRLIKDQNDHSDLEEGIRRLVLCSGKVYYELDEERKKIGAKDVAICRVEQLCPF 929

Query: 480  PYDLIQRELKRYPNAEIVWCQEEPMNMGAYNYVALRLCTAMRALDRGTMEDIKYVGRAPS 301
            PYDLIQRELKRYPNAEIVWCQEEPMNMGAYNY+A RLCTAM+AL+RG++EDIKYVGRAPS
Sbjct: 930  PYDLIQRELKRYPNAEIVWCQEEPMNMGAYNYIAPRLCTAMKALERGSVEDIKYVGRAPS 989

Query: 300  AATATGFSQVHVKEQTELVQKALKQDPINYPW 205
            AATATGF QVHVKEQ+ELVQKA++ +PI+YP+
Sbjct: 990  AATATGFYQVHVKEQSELVQKAMQPEPIHYPF 1021


>ref|XP_002279332.2| PREDICTED: 2-oxoglutarate dehydrogenase, mitochondrial-like [Vitis
            vinifera]
          Length = 959

 Score =  271 bits (693), Expect = 8e-71
 Identities = 125/152 (82%), Positives = 141/152 (92%)
 Frame = -3

Query: 660  KQGTRFKRLIKDQSNHSDLEKGIRRLVLCSGKIYYELDEERKRVNGKDVAICRVEQLCPF 481
            KQGTRFKRLIKDQ++HS LE+GIRRL+LCSGK+YYELDE+RK+V   DVAICRVEQLCPF
Sbjct: 808  KQGTRFKRLIKDQNDHSSLEEGIRRLILCSGKVYYELDEQRKKVKANDVAICRVEQLCPF 867

Query: 480  PYDLIQRELKRYPNAEIVWCQEEPMNMGAYNYVALRLCTAMRALDRGTMEDIKYVGRAPS 301
            PYDL QRELKRYPNAEIVWCQEEPMNMGAYNY+  RLCTAM+ +DRGT+ED+KYVGRAPS
Sbjct: 868  PYDLAQRELKRYPNAEIVWCQEEPMNMGAYNYILPRLCTAMKEVDRGTVEDVKYVGRAPS 927

Query: 300  AATATGFSQVHVKEQTELVQKALKQDPINYPW 205
            AATATGFS +H KEQTELVQKAL+ +PINYP+
Sbjct: 928  AATATGFSSLHTKEQTELVQKALQPEPINYPF 959


>ref|XP_002446307.1| hypothetical protein SORBIDRAFT_06g013940 [Sorghum bicolor]
            gi|241937490|gb|EES10635.1| hypothetical protein
            SORBIDRAFT_06g013940 [Sorghum bicolor]
          Length = 1025

 Score =  265 bits (676), Expect = 8e-69
 Identities = 126/152 (82%), Positives = 139/152 (91%)
 Frame = -3

Query: 660  KQGTRFKRLIKDQSNHSDLEKGIRRLVLCSGKIYYELDEERKRVNGKDVAICRVEQLCPF 481
            KQGTRFKRLIKDQ+NH DLE+GI RLVLCSGK+YYELDEER++    DVAICRVEQLCPF
Sbjct: 874  KQGTRFKRLIKDQNNHKDLEEGINRLVLCSGKVYYELDEERRKAERTDVAICRVEQLCPF 933

Query: 480  PYDLIQRELKRYPNAEIVWCQEEPMNMGAYNYVALRLCTAMRALDRGTMEDIKYVGRAPS 301
            PYDLIQRELKRYPNAEIVWCQEEPMNMGAY+Y+  RL TAM+AL RG +EDIKYVGRAPS
Sbjct: 934  PYDLIQRELKRYPNAEIVWCQEEPMNMGAYSYINPRLLTAMKALGRGGIEDIKYVGRAPS 993

Query: 300  AATATGFSQVHVKEQTELVQKALKQDPINYPW 205
            AATATGF  VHV+EQTELVQKAL++DPINYP+
Sbjct: 994  AATATGFYSVHVQEQTELVQKALQRDPINYPF 1025


>ref|NP_001169698.1| hypothetical protein [Zea mays] gi|224031001|gb|ACN34576.1| unknown
            [Zea mays] gi|414587574|tpg|DAA38145.1| TPA: hypothetical
            protein ZEAMMB73_516904 [Zea mays]
            gi|414587575|tpg|DAA38146.1| TPA: hypothetical protein
            ZEAMMB73_516904 [Zea mays]
          Length = 1025

 Score =  265 bits (676), Expect = 8e-69
 Identities = 126/152 (82%), Positives = 139/152 (91%)
 Frame = -3

Query: 660  KQGTRFKRLIKDQSNHSDLEKGIRRLVLCSGKIYYELDEERKRVNGKDVAICRVEQLCPF 481
            KQGTRFKRLIKDQ+NH DLE+GI RLVLCSGK+YYELDEER++    DVAICRVEQLCPF
Sbjct: 874  KQGTRFKRLIKDQNNHKDLEEGINRLVLCSGKVYYELDEERRKTERTDVAICRVEQLCPF 933

Query: 480  PYDLIQRELKRYPNAEIVWCQEEPMNMGAYNYVALRLCTAMRALDRGTMEDIKYVGRAPS 301
            PYDLIQRELKRYPNAEIVWCQEEPMNMGAY+Y+  RL TAM+AL RG +EDIKYVGRAPS
Sbjct: 934  PYDLIQRELKRYPNAEIVWCQEEPMNMGAYSYINPRLLTAMKALGRGGIEDIKYVGRAPS 993

Query: 300  AATATGFSQVHVKEQTELVQKALKQDPINYPW 205
            AATATGF  VHV+EQTELVQKAL++DPINYP+
Sbjct: 994  AATATGFYSVHVQEQTELVQKALQRDPINYPF 1025


>emb|CAA11552.1| 2-oxoglutarate dehydrogenase, E1 subunit [Arabidopsis thaliana]
          Length = 1027

 Score =  264 bits (675), Expect = 1e-68
 Identities = 126/148 (85%), Positives = 135/148 (91%)
 Frame = -3

Query: 660  KQGTRFKRLIKDQSNHSDLEKGIRRLVLCSGKIYYELDEERKRVNGKDVAICRVEQLCPF 481
            KQGTRFKRLIKDQS HSDLE+GIRRLVLCSGK+YYELDEERK+   KDVAICRVEQLCPF
Sbjct: 875  KQGTRFKRLIKDQSGHSDLEEGIRRLVLCSGKVYYELDEERKKSETKDVAICRVEQLCPF 934

Query: 480  PYDLIQRELKRYPNAEIVWCQEEPMNMGAYNYVALRLCTAMRALDRGTMEDIKYVGRAPS 301
            PYDLIQRELKRYPNAEIVWCQEEPMNMG Y Y+ALRLCTAM+AL RG   DIKYVGR PS
Sbjct: 935  PYDLIQRELKRYPNAEIVWCQEEPMNMGGYQYIALRLCTAMKALQRGNFNDIKYVGRLPS 994

Query: 300  AATATGFSQVHVKEQTELVQKALKQDPI 217
            AATATGF Q+HVKEQT+LV+KAL+ DPI
Sbjct: 995  AATATGFYQLHVKEQTDLVKKALQPDPI 1022


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