BLASTX nr result

ID: Coptis21_contig00025460 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00025460
         (849 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270872.1| PREDICTED: uncharacterized protein SYNPCC700...   317   2e-84
ref|NP_196064.2| uncharacterized protein [Arabidopsis thaliana] ...   303   4e-80
tpg|DAA43360.1| TPA: hypothetical protein ZEAMMB73_635178 [Zea m...   302   5e-80
ref|XP_003518995.1| PREDICTED: uncharacterized protein LOC100789...   302   5e-80
ref|NP_001143018.1| uncharacterized protein LOC100275482 [Zea ma...   302   5e-80

>ref|XP_002270872.1| PREDICTED: uncharacterized protein SYNPCC7002_A1590 [Vitis
           vinifera] gi|296085939|emb|CBI31380.3| unnamed protein
           product [Vitis vinifera]
          Length = 239

 Score =  317 bits (813), Expect = 2e-84
 Identities = 169/243 (69%), Positives = 193/243 (79%), Gaps = 10/243 (4%)
 Frame = +2

Query: 20  HFNSIPISSRNHRSSNPLKKVLCISAVSSS---------SPKARFIAKRTESVTVQQLQR 172
           +  SI    +N RSS  +K +L     SS          +PKARF+A+R ESV+V+QL+R
Sbjct: 9   NLRSICFHRQNPRSSLNVKHILFSYNESSKPSFRISADLAPKARFVARRRESVSVKQLER 68

Query: 173 PLIEYMSLPASQYSVLDAERIERVDENTFRCYVYTFKFFAFEVCPVLLVRVEEQPNGCCI 352
           PL+EYMSLPASQYSVLDAERIERVD+NTFRCYVY F+FFAFEVCPVL+V+VEEQPNGCCI
Sbjct: 69  PLVEYMSLPASQYSVLDAERIERVDDNTFRCYVYRFRFFAFEVCPVLMVKVEEQPNGCCI 128

Query: 353 RLLSCKLEGSPMVVAQNEKFSGVL*Y*FGVGNAASMVNQISCSNERMNS-VQQLTSDTLI 529
           RLLSCKLEGSP+VVAQNEKF             ASMVN+ISC + + NS VQQLTSDT+I
Sbjct: 129 RLLSCKLEGSPVVVAQNEKFH------------ASMVNKISCDSNQSNSLVQQLTSDTVI 176

Query: 530 EVTIDVPFAFLPIPVEAIESTGRQVLEQILRIMLPRFMSQLVKDYQAWATGDMSRQPLGT 709
           EV ID+PF F  IPVEAIESTG QVLEQILRIMLPRFM+QLVKDYQ+WA+GD SRQPLGT
Sbjct: 177 EVIIDIPFPFRAIPVEAIESTGAQVLEQILRIMLPRFMAQLVKDYQSWASGDASRQPLGT 236

Query: 710 GEI 718
           GEI
Sbjct: 237 GEI 239


>ref|NP_196064.2| uncharacterized protein [Arabidopsis thaliana]
           gi|63147366|gb|AAY34156.1| At5g04440 [Arabidopsis
           thaliana] gi|87116598|gb|ABD19663.1| At5g04440
           [Arabidopsis thaliana] gi|332003362|gb|AED90745.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 255

 Score =  303 bits (775), Expect = 4e-80
 Identities = 157/229 (68%), Positives = 185/229 (80%), Gaps = 1/229 (0%)
 Frame = +2

Query: 35  PISSRNHRSSNPLKKVLCISAVSSSSPKARFIAKRTESVTVQQLQRPLIEYMSLPASQYS 214
           P S     S++P++        SSS+PKARFIA++ +SV+V+QLQRPLIEYMSLPASQYS
Sbjct: 45  PSSLATSSSTSPIR------VSSSSTPKARFIARQKQSVSVRQLQRPLIEYMSLPASQYS 98

Query: 215 VLDAERIERVDENTFRCYVYTFKFFAFEVCPVLLVRVEEQPNGCCIRLLSCKLEGSPMVV 394
           VLDAERIERVD+NTFRCYVYTFKFF FEVCPVLLVRVEEQPNGCCI+LLSCKLEGSP+VV
Sbjct: 99  VLDAERIERVDDNTFRCYVYTFKFFNFEVCPVLLVRVEEQPNGCCIKLLSCKLEGSPVVV 158

Query: 395 AQNEKFSGVL*Y*FGVGNAASMVNQISC-SNERMNSVQQLTSDTLIEVTIDVPFAFLPIP 571
           AQN+KF             ASMVN++SC S +  +S QQ+TSD +IEV I++PFAF   P
Sbjct: 159 AQNDKFD------------ASMVNRVSCDSTQEGSSEQQITSDAVIEVNIEIPFAFRVFP 206

Query: 572 VEAIESTGRQVLEQILRIMLPRFMSQLVKDYQAWATGDMSRQPLGTGEI 718
           V AIE+TG QVL+QIL++MLPRF+SQL KDY AWA+GD SRQPLGTGEI
Sbjct: 207 VGAIEATGTQVLDQILKLMLPRFLSQLSKDYHAWASGDTSRQPLGTGEI 255


>tpg|DAA43360.1| TPA: hypothetical protein ZEAMMB73_635178 [Zea mays]
          Length = 231

 Score =  302 bits (774), Expect = 5e-80
 Identities = 156/212 (73%), Positives = 180/212 (84%), Gaps = 3/212 (1%)
 Frame = +2

Query: 92  SAVSSSS--PKARFIAKRTESVTVQQLQRPLIEYMSLPASQYSVLDAERIERVDENTFRC 265
           SAVSSSS  PKARF+A+R+ESV VQQL RPL EYMSLPASQYSVLDAERIERVD++TFRC
Sbjct: 32  SAVSSSSSAPKARFVARRSESVPVQQLVRPLAEYMSLPASQYSVLDAERIERVDDSTFRC 91

Query: 266 YVYTFKFFAFEVCPVLLVRVEEQPNGCCIRLLSCKLEGSPMVVAQNEKFSGVL*Y*FGVG 445
           YVY F+FFA EVCPVLLVRV+E+P+GCCIRLLSCKLEGSP+V AQN+KFS          
Sbjct: 92  YVYRFRFFALEVCPVLLVRVDEEPDGCCIRLLSCKLEGSPLVEAQNDKFS---------- 141

Query: 446 NAASMVNQISCSNERMNS-VQQLTSDTLIEVTIDVPFAFLPIPVEAIESTGRQVLEQILR 622
             ASM N++ CS++  +S +QQLTSDT IEV ID+PF F  IPVEAIES+GRQVLEQ+LR
Sbjct: 142 --ASMANRVFCSSKSQDSTLQQLTSDTTIEVAIDIPFPFRAIPVEAIESSGRQVLEQLLR 199

Query: 623 IMLPRFMSQLVKDYQAWATGDMSRQPLGTGEI 718
           +MLPRF+ QLVKDYQAWA+GD SR+PLGTGEI
Sbjct: 200 VMLPRFLKQLVKDYQAWASGDASRKPLGTGEI 231


>ref|XP_003518995.1| PREDICTED: uncharacterized protein LOC100789119 [Glycine max]
          Length = 228

 Score =  302 bits (774), Expect = 5e-80
 Identities = 161/233 (69%), Positives = 186/233 (79%), Gaps = 1/233 (0%)
 Frame = +2

Query: 23  FNSIPISSRNHRSSNPLKKVLCISAVSSSSPKARFIAKRTESVTVQQLQRPLIEYMSLPA 202
           F SIPIS  + + +    + L + A ++ S KARF+A+R ESV+V+QLQRPLIEYM LPA
Sbjct: 9   FRSIPISFPHTQCALKSPR-LSLRASATPSQKARFVARRKESVSVRQLQRPLIEYMRLPA 67

Query: 203 SQYSVLDAERIERVDENTFRCYVYTFKFFAFEVCPVLLVRVEEQPNGCCIRLLSCKLEGS 382
           SQYSVLDAERIERV+ENTFRCYVY FKFF FEVCPVLLV+VEEQP+GCCI+LLSCKLEGS
Sbjct: 68  SQYSVLDAERIERVNENTFRCYVYRFKFFNFEVCPVLLVKVEEQPDGCCIKLLSCKLEGS 127

Query: 383 PMVVAQNEKFSGVL*Y*FGVGNAASMVNQISC-SNERMNSVQQLTSDTLIEVTIDVPFAF 559
           PMV AQN+KF             A MVN+ISC SN   + +QQLTSDT+IEV+I++PF F
Sbjct: 128 PMVAAQNDKFD------------ALMVNRISCDSNANRSLMQQLTSDTIIEVSIEIPFPF 175

Query: 560 LPIPVEAIESTGRQVLEQILRIMLPRFMSQLVKDYQAWATGDMSRQPLGTGEI 718
             IP +AIES G QVLEQILRIMLPRFMSQL KDYQAWA+GD SRQPLGTGEI
Sbjct: 176 QAIPKQAIESAGTQVLEQILRIMLPRFMSQLEKDYQAWASGDTSRQPLGTGEI 228


>ref|NP_001143018.1| uncharacterized protein LOC100275482 [Zea mays]
           gi|195613014|gb|ACG28337.1| hypothetical protein [Zea
           mays]
          Length = 233

 Score =  302 bits (774), Expect = 5e-80
 Identities = 156/212 (73%), Positives = 179/212 (84%), Gaps = 3/212 (1%)
 Frame = +2

Query: 92  SAVSSSS--PKARFIAKRTESVTVQQLQRPLIEYMSLPASQYSVLDAERIERVDENTFRC 265
           SAVSSSS  PKARF+A+R+ESV VQQL RPL EYMSLPASQYSVLDAERIERVD++TFRC
Sbjct: 34  SAVSSSSSAPKARFVARRSESVPVQQLVRPLAEYMSLPASQYSVLDAERIERVDDSTFRC 93

Query: 266 YVYTFKFFAFEVCPVLLVRVEEQPNGCCIRLLSCKLEGSPMVVAQNEKFSGVL*Y*FGVG 445
           YVY F+FFA EVCPVLLVRV+E+PNGCCI LLSCKLEGSP+V AQN+KFS          
Sbjct: 94  YVYRFRFFALEVCPVLLVRVDEEPNGCCIHLLSCKLEGSPLVEAQNDKFS---------- 143

Query: 446 NAASMVNQISCSNERMNS-VQQLTSDTLIEVTIDVPFAFLPIPVEAIESTGRQVLEQILR 622
             ASM N++ CS++  +S +QQLTSDT IEV ID+PF F  IPVEAIES+GRQVLEQ+LR
Sbjct: 144 --ASMANRVFCSSKSQDSTLQQLTSDTTIEVAIDIPFPFRAIPVEAIESSGRQVLEQLLR 201

Query: 623 IMLPRFMSQLVKDYQAWATGDMSRQPLGTGEI 718
           +MLPRF+ QLVKDYQAWA+GD SR+PLGTGEI
Sbjct: 202 VMLPRFLKQLVKDYQAWASGDASRKPLGTGEI 233


Top