BLASTX nr result
ID: Coptis21_contig00025456
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00025456
(500 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002281658.1| PREDICTED: probable galacturonosyltransferas... 126 5e-49
gb|AAG09558.1|AC011810_17 Unknown Protein [Arabidopsis thaliana] 110 7e-45
gb|AAM61338.1| putative glycosyl transferase [Arabidopsis thaliana] 110 7e-45
ref|NP_563925.1| putative galacturonosyltransferase-like 3 [Arab... 110 7e-45
ref|XP_002312381.1| glycosyltransferase, CAZy family GT8 [Populu... 113 1e-44
>ref|XP_002281658.1| PREDICTED: probable galacturonosyltransferase-like 3 [Vitis
vinifera]
Length = 345
Score = 126 bits (317), Expect(2) = 5e-49
Identities = 60/80 (75%), Positives = 68/80 (85%)
Frame = -1
Query: 242 SCPQNIVFHFLISQQRKQLYNTILTTFPYLNFHFYYFDTNLVRNIISSSIRRALDQPLNY 63
SCP+NIVFHFL S +R +L I+TTFPYL+FH Y+FDTNLV+ ISSSIRRALDQPLNY
Sbjct: 87 SCPENIVFHFLASHRRAELRRIIVTTFPYLSFHLYHFDTNLVKGKISSSIRRALDQPLNY 146
Query: 62 ARIYVPDLLSNGVRRIIYFD 3
ARIY+ DLL GVRRIIYFD
Sbjct: 147 ARIYLADLLPGGVRRIIYFD 166
Score = 93.2 bits (230), Expect(2) = 5e-49
Identities = 45/67 (67%), Positives = 53/67 (79%)
Frame = -2
Query: 493 LPKFREAPAFRNGPKCQKIPLPSFHKNSPHNPSLIHISMTLDTHYLRGSIAGILSILQHA 314
LP F EAPAFRNG +C + S K S +NPS+IHI+MTLD YLRGSIAG+LS+LQHA
Sbjct: 28 LPSFSEAPAFRNGEECPRTTWSSLPKGS-YNPSIIHIAMTLDATYLRGSIAGVLSVLQHA 86
Query: 313 SCPQNIV 293
SCP+NIV
Sbjct: 87 SCPENIV 93
>gb|AAG09558.1|AC011810_17 Unknown Protein [Arabidopsis thaliana]
Length = 363
Score = 110 bits (276), Expect(2) = 7e-45
Identities = 54/81 (66%), Positives = 64/81 (79%), Gaps = 1/81 (1%)
Frame = -1
Query: 242 SCPQNIVFHFLISQQRK-QLYNTILTTFPYLNFHFYYFDTNLVRNIISSSIRRALDQPLN 66
SCP+NIVFHF+ + +R L I +TFPYL +H Y+FD NLVR+ ISSSIRRALDQPLN
Sbjct: 86 SCPENIVFHFIATHRRSADLRRIISSTFPYLTYHIYHFDPNLVRSKISSSIRRALDQPLN 145
Query: 65 YARIYVPDLLSNGVRRIIYFD 3
YARIY+ DLL VRR+IYFD
Sbjct: 146 YARIYLADLLPIAVRRVIYFD 166
Score = 95.1 bits (235), Expect(2) = 7e-45
Identities = 46/68 (67%), Positives = 55/68 (80%), Gaps = 1/68 (1%)
Frame = -2
Query: 493 LPKFREAPAFRNGPKCQKIP-LPSFHKNSPHNPSLIHISMTLDTHYLRGSIAGILSILQH 317
LP FREAPAFRNG +C K +PS H+ HNPS+IHI+MTLD YLRGS+AG+ S+LQH
Sbjct: 28 LPAFREAPAFRNGRECSKTTWIPSDHE---HNPSIIHIAMTLDAIYLRGSVAGVFSVLQH 84
Query: 316 ASCPQNIV 293
ASCP+NIV
Sbjct: 85 ASCPENIV 92
>gb|AAM61338.1| putative glycosyl transferase [Arabidopsis thaliana]
Length = 345
Score = 110 bits (276), Expect(2) = 7e-45
Identities = 54/81 (66%), Positives = 64/81 (79%), Gaps = 1/81 (1%)
Frame = -1
Query: 242 SCPQNIVFHFLISQQRK-QLYNTILTTFPYLNFHFYYFDTNLVRNIISSSIRRALDQPLN 66
SCP+NIVFHF+ + +R L I +TFPYL +H Y+FD NLVR+ ISSSIRRALDQPLN
Sbjct: 86 SCPENIVFHFIATHRRSADLRRIISSTFPYLTYHIYHFDPNLVRSKISSSIRRALDQPLN 145
Query: 65 YARIYVPDLLSNGVRRIIYFD 3
YARIY+ DLL VRR+IYFD
Sbjct: 146 YARIYLADLLPIAVRRVIYFD 166
Score = 95.1 bits (235), Expect(2) = 7e-45
Identities = 46/68 (67%), Positives = 55/68 (80%), Gaps = 1/68 (1%)
Frame = -2
Query: 493 LPKFREAPAFRNGPKCQKIP-LPSFHKNSPHNPSLIHISMTLDTHYLRGSIAGILSILQH 317
LP FREAPAFRNG +C K +PS H+ HNPS+IHI+MTLD YLRGS+AG+ S+LQH
Sbjct: 28 LPAFREAPAFRNGRECSKTTWIPSDHE---HNPSIIHIAMTLDAIYLRGSVAGVFSVLQH 84
Query: 316 ASCPQNIV 293
ASCP+NIV
Sbjct: 85 ASCPENIV 92
>ref|NP_563925.1| putative galacturonosyltransferase-like 3 [Arabidopsis thaliana]
gi|122223578|sp|Q0V7R1.1|GATL3_ARATH RecName:
Full=Probable galacturonosyltransferase-like 3
gi|111074486|gb|ABH04616.1| At1g13250 [Arabidopsis
thaliana] gi|332190869|gb|AEE28990.1| putative
galacturonosyltransferase-like 3 [Arabidopsis thaliana]
Length = 345
Score = 110 bits (276), Expect(2) = 7e-45
Identities = 54/81 (66%), Positives = 64/81 (79%), Gaps = 1/81 (1%)
Frame = -1
Query: 242 SCPQNIVFHFLISQQRK-QLYNTILTTFPYLNFHFYYFDTNLVRNIISSSIRRALDQPLN 66
SCP+NIVFHF+ + +R L I +TFPYL +H Y+FD NLVR+ ISSSIRRALDQPLN
Sbjct: 86 SCPENIVFHFIATHRRSADLRRIISSTFPYLTYHIYHFDPNLVRSKISSSIRRALDQPLN 145
Query: 65 YARIYVPDLLSNGVRRIIYFD 3
YARIY+ DLL VRR+IYFD
Sbjct: 146 YARIYLADLLPIAVRRVIYFD 166
Score = 95.1 bits (235), Expect(2) = 7e-45
Identities = 46/68 (67%), Positives = 55/68 (80%), Gaps = 1/68 (1%)
Frame = -2
Query: 493 LPKFREAPAFRNGPKCQKIP-LPSFHKNSPHNPSLIHISMTLDTHYLRGSIAGILSILQH 317
LP FREAPAFRNG +C K +PS H+ HNPS+IHI+MTLD YLRGS+AG+ S+LQH
Sbjct: 28 LPAFREAPAFRNGRECSKTTWIPSDHE---HNPSIIHIAMTLDAIYLRGSVAGVFSVLQH 84
Query: 316 ASCPQNIV 293
ASCP+NIV
Sbjct: 85 ASCPENIV 92
>ref|XP_002312381.1| glycosyltransferase, CAZy family GT8 [Populus trichocarpa]
gi|222852201|gb|EEE89748.1| glycosyltransferase, CAZy
family GT8 [Populus trichocarpa]
Length = 346
Score = 113 bits (283), Expect(2) = 1e-44
Identities = 54/80 (67%), Positives = 65/80 (81%)
Frame = -1
Query: 242 SCPQNIVFHFLISQQRKQLYNTILTTFPYLNFHFYYFDTNLVRNIISSSIRRALDQPLNY 63
+CP++IVFHF+ + +R L TI +TFPYL FH Y+F+T+LVR ISSSIRRALDQPLNY
Sbjct: 88 ACPEHIVFHFIATHRRADLRRTITSTFPYLTFHLYHFNTDLVRGKISSSIRRALDQPLNY 147
Query: 62 ARIYVPDLLSNGVRRIIYFD 3
ARIY+ DLL VRRIIYFD
Sbjct: 148 ARIYLADLLPFTVRRIIYFD 167
Score = 91.7 bits (226), Expect(2) = 1e-44
Identities = 44/70 (62%), Positives = 54/70 (77%), Gaps = 3/70 (4%)
Frame = -2
Query: 493 LPKFREAPAFRNGPKCQKIPLPSFHKN---SPHNPSLIHISMTLDTHYLRGSIAGILSIL 323
LP FREAPAFRNG +C K PS N H+PS+IHI+MTLD YLRGS+AG+LS+L
Sbjct: 25 LPAFREAPAFRNGRECPKKTWPSSFNNLNHHRHDPSIIHIAMTLDATYLRGSVAGVLSVL 84
Query: 322 QHASCPQNIV 293
QHA+CP++IV
Sbjct: 85 QHAACPEHIV 94