BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00025442
         (339 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002535295.1| conserved hypothetical protein [Ricinus comm...   102   2e-20
gb|AFW63421.1| hypothetical protein ZEAMMB73_397358 [Zea mays] g...    96   2e-18
emb|CAA27743.1| URF-1 [Citrullus lanatus]                              91   1e-16
sp|P08834.1|NU1M_CITLA RecName: Full=NADH-ubiquinone oxidoreduct...    91   1e-16
gb|EEE54711.1| hypothetical protein OsJ_02036 [Oryza sativa Japo...    77   1e-12

>ref|XP_002535295.1| conserved hypothetical protein [Ricinus communis]
           gi|223523525|gb|EEF27089.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 139

 Score =  102 bits (255), Expect = 2e-20
 Identities = 51/72 (70%), Positives = 56/72 (77%)
 Frame = -3

Query: 337 GSVRRDTREMLSISPKQIPPPMLPRSAYRGIEREDPGPEQVGLGYRAVSAVGGDRGRART 158
           GSVRRD RE+   S     PPMLP+SAYRGIEREDPGPEQVGLGYRAVSA+GGDRGRAR 
Sbjct: 43  GSVRRDKREIFYQSKADTAPPMLPQSAYRGIEREDPGPEQVGLGYRAVSAMGGDRGRARA 102

Query: 157 VHSGGMIKSYIV 122
           + S   + SY V
Sbjct: 103 LRSAAQMVSYEV 114


>gb|AFW63421.1| hypothetical protein ZEAMMB73_397358 [Zea mays]
           gi|413923490|gb|AFW63422.1| hypothetical protein
           ZEAMMB73_397358 [Zea mays] gi|413923799|gb|AFW63731.1|
           hypothetical protein ZEAMMB73_879039 [Zea mays]
           gi|413923800|gb|AFW63732.1| hypothetical protein
           ZEAMMB73_879039 [Zea mays]
          Length = 172

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 59/109 (54%), Positives = 69/109 (63%), Gaps = 1/109 (0%)
 Frame = -1

Query: 330 SGGTQERCFLSVQSRYRPPCSHDPLTEE*KGRTRGQSKLGWGIEP*ARWGVTEDVLVRFI 151
           SGG ++     +  +  PP  H PLTEE      G  ++G G    +  GVTEDVLVRFI
Sbjct: 53  SGGKKKDMLFPISPKRIPPSFHGPLTEEEMREDPGPEQVGLGYRAVSAVGVTEDVLVRFI 112

Query: 150 AGV**SRILLGTFT-PLYSKYAFLGALRSAAQMVSYEVSIGLILITVLI 7
            G     IL+  +  PLYSKYAFLGALRSAAQMVSYEVSIGLILI  L+
Sbjct: 113 VGY---DILVDCWERPLYSKYAFLGALRSAAQMVSYEVSIGLILIVRLV 158


>emb|CAA27743.1| URF-1 [Citrullus lanatus]
          Length = 316

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 61/109 (55%), Positives = 67/109 (61%), Gaps = 4/109 (3%)
 Frame = -1

Query: 318 QERCFLSVQSRYRPPCSHDP---LTEE*KGRTRGQSKLGW-GIEP*ARWGVTEDVLVRFI 151
           +ERCF SV+SRYRPP  H P   L    KGRT  ++   W G++   R G          
Sbjct: 50  KERCFPSVKSRYRPP--HAPPVRLPRNRKGRTGARAS--WVGVKSRKRGGG--------- 96

Query: 150 AGV**SRILLGTFTPLYSKYAFLGALRSAAQMVSYEVSIGLILITVLIC 4
                   LLGTFTPLYSKYAFLGALRSAAQMV YEVSIGLILI  LIC
Sbjct: 97  --------LLGTFTPLYSKYAFLGALRSAAQMVPYEVSIGLILIVRLIC 137


>sp|P08834.1|NU1M_CITLA RecName: Full=NADH-ubiquinone oxidoreductase chain 1; AltName:
           Full=NADH dehydrogenase subunit 1
          Length = 316

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 61/109 (55%), Positives = 67/109 (61%), Gaps = 4/109 (3%)
 Frame = -1

Query: 318 QERCFLSVQSRYRPPCSHDP---LTEE*KGRTRGQSKLGW-GIEP*ARWGVTEDVLVRFI 151
           +ERCF SV+SRYRPP  H P   L    KGRT  ++   W G++   R G          
Sbjct: 50  KERCFPSVKSRYRPP--HAPPVRLPRNRKGRTGARAS--WVGVKSRKRGGG--------- 96

Query: 150 AGV**SRILLGTFTPLYSKYAFLGALRSAAQMVSYEVSIGLILITVLIC 4
                   LLGTFTPLYSKYAFLGALRSAAQMV YEVSIGLILI  LIC
Sbjct: 97  --------LLGTFTPLYSKYAFLGALRSAAQMVPYEVSIGLILIVRLIC 137


>gb|EEE54711.1| hypothetical protein OsJ_02036 [Oryza sativa Japonica Group]
          Length = 91

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 47/76 (61%), Positives = 54/76 (71%), Gaps = 1/76 (1%)
 Frame = -1

Query: 231 RGQSKLGWGIEP*ARWGVTEDVLVRFIAGV**SRILLGTFT-PLYSKYAFLGALRSAAQM 55
           +G  ++G G    +  GVTEDVLVRFI G     IL+  +  PLYSKYAFLGALRSAAQM
Sbjct: 5   QGPEQVGLGYRAVSAVGVTEDVLVRFIVGY---DILVDCWERPLYSKYAFLGALRSAAQM 61

Query: 54  VSYEVSIGLILITVLI 7
           V YEVSIGLILI  L+
Sbjct: 62  VPYEVSIGLILIVRLV 77