BLASTX nr result
ID: Coptis21_contig00025436
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00025436
(648 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002263889.1| PREDICTED: ATP-dependent RNA helicase DHX29 ... 336 3e-90
emb|CAE03039.3| OSJNBa0084A10.14 [Oryza sativa Japonica Group] g... 317 1e-84
gb|EAY94172.1| hypothetical protein OsI_15944 [Oryza sativa Indi... 317 1e-84
ref|XP_002528999.1| ATP-dependent RNA helicase, putative [Ricinu... 316 2e-84
ref|XP_003581237.1| PREDICTED: ATP-dependent RNA helicase Dhx29-... 311 7e-83
>ref|XP_002263889.1| PREDICTED: ATP-dependent RNA helicase DHX29 [Vitis vinifera]
gi|297739540|emb|CBI29722.3| unnamed protein product
[Vitis vinifera]
Length = 1458
Score = 336 bits (861), Expect = 3e-90
Identities = 166/216 (76%), Positives = 192/216 (88%)
Frame = +1
Query: 1 ESLKYCLGSDSPASLRHMTPRNEKFRSSTVDNRRGNRNLVLSSWGDDSLLSEDPVNPNYD 180
ES+ Y L SDSPAS+R+ T +K +S V+NRRG RNLVLS+WGDDS+LSE+ +NP Y
Sbjct: 816 ESIDYRLASDSPASIRYETSIKQK--TSAVNNRRGKRNLVLSAWGDDSVLSEECINPYYV 873
Query: 181 PSLYESLSERTQENLKSLNEDVIDYELLEDLVCHVDETYPAGAILIFLPGVAEIEMLLDR 360
P+ Y+S SE+TQ+NLK LNEDVIDY+LLEDLVC+VDETYPAGAIL+FLPGVAEI MLLD+
Sbjct: 874 PNAYQSYSEKTQQNLKRLNEDVIDYDLLEDLVCYVDETYPAGAILVFLPGVAEIYMLLDK 933
Query: 361 LLASYRFGGNSSDWILPLHSTLASVDQKKVFMSPPENIRKVIIATNIAETSITIDDVVYV 540
L ASYRF G SSDW+LPLHS++AS DQ+KVF+ PPENIRKVIIATNIAETSITIDDVVYV
Sbjct: 934 LAASYRFRGLSSDWLLPLHSSIASDDQRKVFLQPPENIRKVIIATNIAETSITIDDVVYV 993
Query: 541 IDCGKHKEQRFNPQKKLSSMVEDWISRANARQRRGR 648
IDCGKHKE R+NPQKKLSSMVEDWIS+ANA+QRRGR
Sbjct: 994 IDCGKHKENRYNPQKKLSSMVEDWISQANAKQRRGR 1029
>emb|CAE03039.3| OSJNBa0084A10.14 [Oryza sativa Japonica Group]
gi|116309362|emb|CAH66443.1| B0308C03.3 [Oryza sativa
Indica Group]
Length = 1439
Score = 317 bits (812), Expect = 1e-84
Identities = 152/218 (69%), Positives = 184/218 (84%), Gaps = 2/218 (0%)
Frame = +1
Query: 1 ESLKYCLGSDSPASLRHMTPRNEKFR--SSTVDNRRGNRNLVLSSWGDDSLLSEDPVNPN 174
E ++YCL DSPAS + EK++ SSTV+NRRG +NLVLSSWGD+S+L+ED VNP+
Sbjct: 791 EKMEYCLALDSPASGAYFQQHGEKWKNASSTVNNRRGKKNLVLSSWGDESVLTEDYVNPH 850
Query: 175 YDPSLYESLSERTQENLKSLNEDVIDYELLEDLVCHVDETYPAGAILIFLPGVAEIEMLL 354
Y Y+S SERT +NLK LNEDVID++LLEDL+C++DE P GA+L+FLPGVAEI+ML+
Sbjct: 851 YTTDCYQSYSERTNQNLKRLNEDVIDFDLLEDLICYIDENCPPGAVLVFLPGVAEIDMLI 910
Query: 355 DRLLASYRFGGNSSDWILPLHSTLASVDQKKVFMSPPENIRKVIIATNIAETSITIDDVV 534
DRL AS RFG SSDWILPLHS LA DQ+KVF SPPENIRK+I+AT+IAETSITIDDV+
Sbjct: 911 DRLSASVRFGRESSDWILPLHSLLAPTDQRKVFQSPPENIRKIIVATDIAETSITIDDVI 970
Query: 535 YVIDCGKHKEQRFNPQKKLSSMVEDWISRANARQRRGR 648
YV+D GKHKE R+NPQKK+SS+VEDWISRANA+QRRGR
Sbjct: 971 YVVDTGKHKENRYNPQKKMSSIVEDWISRANAKQRRGR 1008
>gb|EAY94172.1| hypothetical protein OsI_15944 [Oryza sativa Indica Group]
Length = 1439
Score = 317 bits (812), Expect = 1e-84
Identities = 152/218 (69%), Positives = 184/218 (84%), Gaps = 2/218 (0%)
Frame = +1
Query: 1 ESLKYCLGSDSPASLRHMTPRNEKFR--SSTVDNRRGNRNLVLSSWGDDSLLSEDPVNPN 174
E ++YCL DSPAS + EK++ SSTV+NRRG +NLVLSSWGD+S+L+ED VNP+
Sbjct: 791 EKMEYCLALDSPASGAYFQQHGEKWKNASSTVNNRRGKKNLVLSSWGDESVLTEDYVNPH 850
Query: 175 YDPSLYESLSERTQENLKSLNEDVIDYELLEDLVCHVDETYPAGAILIFLPGVAEIEMLL 354
Y Y+S SERT +NLK LNEDVID++LLEDL+C++DE P GA+L+FLPGVAEI+ML+
Sbjct: 851 YTTDCYQSYSERTNQNLKRLNEDVIDFDLLEDLICYIDENCPPGAVLVFLPGVAEIDMLI 910
Query: 355 DRLLASYRFGGNSSDWILPLHSTLASVDQKKVFMSPPENIRKVIIATNIAETSITIDDVV 534
DRL AS RFG SSDWILPLHS LA DQ+KVF SPPENIRK+I+AT+IAETSITIDDV+
Sbjct: 911 DRLSASVRFGRESSDWILPLHSLLAPTDQRKVFQSPPENIRKIIVATDIAETSITIDDVI 970
Query: 535 YVIDCGKHKEQRFNPQKKLSSMVEDWISRANARQRRGR 648
YV+D GKHKE R+NPQKK+SS+VEDWISRANA+QRRGR
Sbjct: 971 YVVDTGKHKENRYNPQKKMSSIVEDWISRANAKQRRGR 1008
>ref|XP_002528999.1| ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223531539|gb|EEF33369.1| ATP-dependent RNA helicase,
putative [Ricinus communis]
Length = 1509
Score = 316 bits (810), Expect = 2e-84
Identities = 157/216 (72%), Positives = 186/216 (86%)
Frame = +1
Query: 1 ESLKYCLGSDSPASLRHMTPRNEKFRSSTVDNRRGNRNLVLSSWGDDSLLSEDPVNPNYD 180
ES+ Y L SDSPA+L T K S V++RRG +NLVLS WGDDSLLSE+ +NP++
Sbjct: 815 ESIDYHLASDSPAALGLQTSTIAK--SGPVNDRRGKKNLVLSGWGDDSLLSEEIINPHFV 872
Query: 181 PSLYESLSERTQENLKSLNEDVIDYELLEDLVCHVDETYPAGAILIFLPGVAEIEMLLDR 360
S Y+S SE+TQ+NLK L+ED+IDY+LLEDL+ HVD+TY GAIL+FLPG++EI MLLDR
Sbjct: 873 SSNYQSYSEQTQKNLKRLDEDIIDYDLLEDLIFHVDQTYGEGAILVFLPGMSEIHMLLDR 932
Query: 361 LLASYRFGGNSSDWILPLHSTLASVDQKKVFMSPPENIRKVIIATNIAETSITIDDVVYV 540
L+ASYRFGG SS+W+LPLHS++AS DQKKVF+ PPENIRKVIIATNIAETSITIDDVVYV
Sbjct: 933 LVASYRFGGPSSNWVLPLHSSIASTDQKKVFLRPPENIRKVIIATNIAETSITIDDVVYV 992
Query: 541 IDCGKHKEQRFNPQKKLSSMVEDWISRANARQRRGR 648
IDCGKHKE R+NPQKKL+SMVEDWIS+ANARQRRGR
Sbjct: 993 IDCGKHKENRYNPQKKLTSMVEDWISQANARQRRGR 1028
>ref|XP_003581237.1| PREDICTED: ATP-dependent RNA helicase Dhx29-like [Brachypodium
distachyon]
Length = 1418
Score = 311 bits (797), Expect = 7e-83
Identities = 151/216 (69%), Positives = 180/216 (83%)
Frame = +1
Query: 1 ESLKYCLGSDSPASLRHMTPRNEKFRSSTVDNRRGNRNLVLSSWGDDSLLSEDPVNPNYD 180
E + YCL DSPAS + EK SS+V+NRRG +NLVLSSWGD+S+LSE+ VNP+Y
Sbjct: 772 EKMDYCLALDSPASGAYFAQHGEKHASSSVNNRRGMKNLVLSSWGDESVLSENYVNPHYT 831
Query: 181 PSLYESLSERTQENLKSLNEDVIDYELLEDLVCHVDETYPAGAILIFLPGVAEIEMLLDR 360
Y S SERT +NLK +NE+VID++LLEDL+C++DE P GA+L+FLPGVAEIEML+DR
Sbjct: 832 SDCYLSYSERTNQNLKRINEEVIDFDLLEDLICYIDENCPHGAVLVFLPGVAEIEMLIDR 891
Query: 361 LLASYRFGGNSSDWILPLHSTLASVDQKKVFMSPPENIRKVIIATNIAETSITIDDVVYV 540
L AS RF G SSDWILPLHS L+ DQ+KVF SPPENIRKVI+AT+IAETSITIDDVVYV
Sbjct: 892 LSASVRFKGVSSDWILPLHSMLSPTDQRKVFQSPPENIRKVILATDIAETSITIDDVVYV 951
Query: 541 IDCGKHKEQRFNPQKKLSSMVEDWISRANARQRRGR 648
+D GKHKE R+NPQKK+SS+VEDWISRANA+QRRGR
Sbjct: 952 VDTGKHKENRYNPQKKMSSIVEDWISRANAKQRRGR 987