BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00025416
         (345 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF18538.1|AC006551_24 Very similar to retrotransposon revers...    41   6e-08
gb|AAF69169.1|AC007915_21 F27F5.21 [Arabidopsis thaliana]              47   3e-07
gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-...    47   8e-07
gb|ACK44480.1| hypothetical protein 2 [Triticum aestivum]              44   1e-06
dbj|BAB01814.1| unnamed protein product [Arabidopsis thaliana]         45   1e-06

>gb|AAF18538.1|AC006551_24 Very similar to retrotransposon reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1231

 Score = 40.8 bits (94), Expect(2) = 6e-08
 Identities = 15/44 (34%), Positives = 23/44 (52%)
 Frame = -1

Query: 345 PVYTMSSFHIPLAITSNMDKMCRNFWWNSGAEGRALHLTKWENL 214
           PV+ MS F +P    +N+     +FWW++    R +H   WE L
Sbjct: 649 PVFAMSCFKLPKTTCTNLASAMADFWWSANDHQRKIHWLSWEKL 692



 Score = 40.8 bits (94), Expect(2) = 6e-08
 Identities = 17/26 (65%), Positives = 21/26 (80%)
 Frame = -2

Query: 221 KICLPKRYGSLGFRESNIFNLALLAK 144
           K+CLPK +G LGFR+  +FN ALLAK
Sbjct: 691 KLCLPKEHGGLGFRDIGLFNQALLAK 716


>gb|AAF69169.1|AC007915_21 F27F5.21 [Arabidopsis thaliana]
          Length = 1023

 Score = 46.6 bits (109), Expect(2) = 3e-07
 Identities = 18/44 (40%), Positives = 22/44 (50%)
 Frame = -1

Query: 345 PVYTMSSFHIPLAITSNMDKMCRNFWWNSGAEGRALHLTKWENL 214
           P Y MS F +P  ITS +      FWW+S  E R +H   W  L
Sbjct: 651 PTYVMSCFRLPKTITSKLTSAVAKFWWSSDGESRGMHWMAWNKL 694



 Score = 32.7 bits (73), Expect(2) = 3e-07
 Identities = 16/26 (61%), Positives = 17/26 (65%)
 Frame = -2

Query: 221 KICLPKRYGSLGFRESNIFNLALLAK 144
           K+C  K  G LGFR  N FN ALLAK
Sbjct: 693 KLCSSKADGGLGFRSVNDFNSALLAK 718


>gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-20266 [Arabidopsis thaliana]
          Length = 1142

 Score = 47.0 bits (110), Expect(2) = 8e-07
 Identities = 18/44 (40%), Positives = 24/44 (54%)
 Frame = -1

Query: 345 PVYTMSSFHIPLAITSNMDKMCRNFWWNSGAEGRALHLTKWENL 214
           P Y MS F +P AITS +      FWW+S  + R +H   W+ L
Sbjct: 585 PRYVMSCFRLPKAITSKLTSAVAKFWWSSNGDSRGMHWMAWDKL 628



 Score = 30.8 bits (68), Expect(2) = 8e-07
 Identities = 15/26 (57%), Positives = 17/26 (65%)
 Frame = -2

Query: 221 KICLPKRYGSLGFRESNIFNLALLAK 144
           K+C  K  G LGFR  + FN ALLAK
Sbjct: 627 KLCSSKSDGGLGFRNVDDFNSALLAK 652


>gb|ACK44480.1| hypothetical protein 2 [Triticum aestivum]
          Length = 372

 Score = 44.3 bits (103), Expect(2) = 1e-06
 Identities = 16/44 (36%), Positives = 24/44 (54%)
 Frame = -1

Query: 345 PVYTMSSFHIPLAITSNMDKMCRNFWWNSGAEGRALHLTKWENL 214
           P Y M  F +PL++  ++ +M RN+WW S    R  H   WE +
Sbjct: 18  PAYIMGVFKLPLSVCDDLTRMVRNYWWGSEKGKRKAHWMAWEKI 61



 Score = 33.1 bits (74), Expect(2) = 1e-06
 Identities = 16/26 (61%), Positives = 18/26 (69%)
 Frame = -2

Query: 221 KICLPKRYGSLGFRESNIFNLALLAK 144
           KI  PK  G LGFR+  IFN ALLA+
Sbjct: 60  KIIQPKARGGLGFRDYRIFNQALLAR 85


>dbj|BAB01814.1| unnamed protein product [Arabidopsis thaliana]
          Length = 170

 Score = 45.4 bits (106), Expect(2) = 1e-06
 Identities = 17/44 (38%), Positives = 23/44 (52%)
 Frame = -1

Query: 345 PVYTMSSFHIPLAITSNMDKMCRNFWWNSGAEGRALHLTKWENL 214
           P Y MS F +P  ITS +      FWW+S  E R +H   W+ +
Sbjct: 55  PTYVMSCFTLPKTITSKLTSAIPKFWWSSNGESRGMHWMAWDKV 98



 Score = 32.0 bits (71), Expect(2) = 1e-06
 Identities = 15/26 (57%), Positives = 17/26 (65%)
 Frame = -2

Query: 221 KICLPKRYGSLGFRESNIFNLALLAK 144
           K+C  K  G LGFR  + FN ALLAK
Sbjct: 97  KVCYSKSEGGLGFRSVDNFNSALLAK 122