BLASTX nr result

ID: Coptis21_contig00025415 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00025415
         (424 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512912.1| conserved hypothetical protein [Ricinus comm...   160   1e-37
ref|XP_002305434.1| predicted protein [Populus trichocarpa] gi|2...   158   5e-37
ref|XP_002313791.1| predicted protein [Populus trichocarpa] gi|2...   157   7e-37
emb|CBI37656.3| unnamed protein product [Vitis vinifera]              146   2e-33
ref|XP_002284113.1| PREDICTED: transcription factor bHLH63-like ...   146   2e-33

>ref|XP_002512912.1| conserved hypothetical protein [Ricinus communis]
           gi|223547923|gb|EEF49415.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 444

 Score =  160 bits (405), Expect = 1e-37
 Identities = 82/149 (55%), Positives = 104/149 (69%), Gaps = 9/149 (6%)
 Frame = +2

Query: 2   YVQSLQRQVEFLSMKLAAVNPQIDDNIDNFFAKEMLESCTDSFLPVGMLAEVINSTYHQF 181
           YVQSLQRQVEFLSMKLAAVNP++D NIDN  AKE    C  +F  +G+ +++ N  Y QF
Sbjct: 286 YVQSLQRQVEFLSMKLAAVNPRLDFNIDNLIAKETFPPCPTNFPAIGLSSDMTNPAYLQF 345

Query: 182 N---------QVQQVLSCGGSGLEINHTQMSLGRTTSAPVSVPEEYLDSSCFPLSQPQSA 334
           N         Q QQ+++C G  + IN+  M + RT SAPVS+PE Y+DSSCF   Q  S 
Sbjct: 346 NPVQQQQQQQQQQQLVTCCGLDMGINNPDMGIRRTISAPVSIPESYIDSSCFNQIQSSST 405

Query: 335 WENDLQSVYNIAFHHQGRSTSFPSEPFTG 421
           W+ DLQ++YN+AF  QGRSTSFP++PFTG
Sbjct: 406 WDADLQNLYNVAF-DQGRSTSFPTQPFTG 433


>ref|XP_002305434.1| predicted protein [Populus trichocarpa] gi|222848398|gb|EEE85945.1|
           predicted protein [Populus trichocarpa]
          Length = 177

 Score =  158 bits (399), Expect = 5e-37
 Identities = 80/142 (56%), Positives = 102/142 (71%), Gaps = 1/142 (0%)
 Frame = +2

Query: 2   YVQSLQRQVEFLSMKLAAVNPQIDDNIDNFFAKEMLESCTDSFLPVGMLAEVINSTYHQF 181
           YVQSLQRQVEFLSMKLAAVNP++D NIDN FAKE   +C+ +F  +GM  ++ N+ Y QF
Sbjct: 27  YVQSLQRQVEFLSMKLAAVNPRLDFNIDNLFAKEAFPACSTNFPAIGMSPDMTNAAYLQF 86

Query: 182 NQV-QQVLSCGGSGLEINHTQMSLGRTTSAPVSVPEEYLDSSCFPLSQPQSAWENDLQSV 358
           N   QQ++SC G  + IN   M L RTTS PVS+PE +LDSSCF   Q    W+ DL ++
Sbjct: 87  NPAQQQLVSCCGLDMGINPPDMGLRRTTSTPVSIPETFLDSSCFTQIQAPPTWDADLPNL 146

Query: 359 YNIAFHHQGRSTSFPSEPFTGN 424
           YN+AF  QGR T+FP +PF+G+
Sbjct: 147 YNVAF-DQGRQTTFPVQPFSGS 167


>ref|XP_002313791.1| predicted protein [Populus trichocarpa] gi|222850199|gb|EEE87746.1|
           predicted protein [Populus trichocarpa]
          Length = 439

 Score =  157 bits (398), Expect = 7e-37
 Identities = 78/142 (54%), Positives = 104/142 (73%), Gaps = 1/142 (0%)
 Frame = +2

Query: 2   YVQSLQRQVEFLSMKLAAVNPQIDDNIDNFFAKEMLESCTDSFLPVGMLAEVINSTYHQF 181
           YVQSLQRQVEFLSMKLAAVNP++D N DN FA+E   +C+ +F  +GM +++ N  Y QF
Sbjct: 289 YVQSLQRQVEFLSMKLAAVNPRLDFNFDNLFAREAFPACSVNFPTIGMSSDMTNPAYLQF 348

Query: 182 NQV-QQVLSCGGSGLEINHTQMSLGRTTSAPVSVPEEYLDSSCFPLSQPQSAWENDLQSV 358
           N   QQ+++C G  +  +   M L RTTS+P S+PE +LDSSCF  + P  AW+ DLQ++
Sbjct: 349 NPAQQQLVTCCGLDMGTDPPDMGLKRTTSSPESIPETFLDSSCFTQAHPPPAWDADLQNL 408

Query: 359 YNIAFHHQGRSTSFPSEPFTGN 424
           YN+AF  QGR TSFP++PFTG+
Sbjct: 409 YNVAF-DQGRQTSFPTQPFTGS 429


>emb|CBI37656.3| unnamed protein product [Vitis vinifera]
          Length = 345

 Score =  146 bits (369), Expect = 2e-33
 Identities = 78/141 (55%), Positives = 102/141 (72%), Gaps = 1/141 (0%)
 Frame = +2

Query: 2   YVQSLQRQVEFLSMKLAAVNPQIDDNIDNFFAKEMLESCTDSFLPVGMLAEVINSTYHQF 181
           YVQSLQRQVEFLSMKLAAVNP++D NIDNF AKE+  +C  +F  +GM +E+ N +Y  +
Sbjct: 197 YVQSLQRQVEFLSMKLAAVNPRLDFNIDNFLAKEVFPACAANFPTIGMSSEMTNPSYLHY 256

Query: 182 NQVQQVLSCGGSGLEINHTQMSLGRTTSAPVSVPEEYLDSSCFPLSQPQSAWENDLQSVY 361
           + +QQV +CG   + IN  +++L RT SAPVS+P+ +LD SCF   QP S W+ DLQ++Y
Sbjct: 257 DPIQQVATCGVE-MGINPAEIALRRTISAPVSIPDTFLD-SCFTQIQPSSTWDADLQNLY 314

Query: 362 NIAFHHQGRSTSFPSE-PFTG 421
              F HQGR  SFPS+  FTG
Sbjct: 315 GPEF-HQGRLMSFPSQAAFTG 334


>ref|XP_002284113.1| PREDICTED: transcription factor bHLH63-like [Vitis vinifera]
          Length = 456

 Score =  146 bits (369), Expect = 2e-33
 Identities = 78/141 (55%), Positives = 102/141 (72%), Gaps = 1/141 (0%)
 Frame = +2

Query: 2   YVQSLQRQVEFLSMKLAAVNPQIDDNIDNFFAKEMLESCTDSFLPVGMLAEVINSTYHQF 181
           YVQSLQRQVEFLSMKLAAVNP++D NIDNF AKE+  +C  +F  +GM +E+ N +Y  +
Sbjct: 308 YVQSLQRQVEFLSMKLAAVNPRLDFNIDNFLAKEVFPACAANFPTIGMSSEMTNPSYLHY 367

Query: 182 NQVQQVLSCGGSGLEINHTQMSLGRTTSAPVSVPEEYLDSSCFPLSQPQSAWENDLQSVY 361
           + +QQV +CG   + IN  +++L RT SAPVS+P+ +LD SCF   QP S W+ DLQ++Y
Sbjct: 368 DPIQQVATCGVE-MGINPAEIALRRTISAPVSIPDTFLD-SCFTQIQPSSTWDADLQNLY 425

Query: 362 NIAFHHQGRSTSFPSE-PFTG 421
              F HQGR  SFPS+  FTG
Sbjct: 426 GPEF-HQGRLMSFPSQAAFTG 445


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