BLASTX nr result

ID: Coptis21_contig00025412 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00025412
         (331 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002509985.1| Cell division protein ftsH, putative [Ricinu...    83   2e-31
ref|XP_002266075.1| PREDICTED: ATP-dependent zinc metalloproteas...    79   2e-30
ref|XP_002299463.1| predicted protein [Populus trichocarpa] gi|2...    80   7e-30
ref|XP_003532440.1| PREDICTED: ATP-dependent zinc metalloproteas...    82   3e-29
ref|NP_567691.1| FtsH extracellular protease [Arabidopsis thalia...    78   4e-28

>ref|XP_002509985.1| Cell division protein ftsH, putative [Ricinus communis]
           gi|223549884|gb|EEF51372.1| Cell division protein ftsH,
           putative [Ricinus communis]
          Length = 925

 Score = 82.8 bits (203), Expect(2) = 2e-31
 Identities = 38/47 (80%), Positives = 42/47 (89%)
 Frame = -2

Query: 162 YEDAKVESCERISIIPRGQSLSQTVFHRLGDESYIFECRPQLLHRFQ 22
           YEDAKVE C+RISI+PRGQ+LSQ VFHRL DESY+FE RPQLLHR Q
Sbjct: 699 YEDAKVECCDRISIVPRGQTLSQVVFHRLDDESYMFERRPQLLHRLQ 745



 Score = 77.8 bits (190), Expect(2) = 2e-31
 Identities = 39/54 (72%), Positives = 43/54 (79%)
 Frame = -3

Query: 329 AVRRGHGSILHSXXXXXXDHLTVGPKRVGIELGHQGQCGRATTEVGTAMTSYLL 168
           AVR+GH SI+ S      D LTVGPKRVGI+LGHQGQC RATTEVG AMTS+LL
Sbjct: 643 AVRQGHASIIQSDIDDAVDRLTVGPKRVGIDLGHQGQCRRATTEVGVAMTSHLL 696


>ref|XP_002266075.1| PREDICTED: ATP-dependent zinc metalloprotease FtsH [Vitis vinifera]
           gi|296090151|emb|CBI39970.3| unnamed protein product
           [Vitis vinifera]
          Length = 907

 Score = 79.0 bits (193), Expect(2) = 2e-30
 Identities = 37/48 (77%), Positives = 41/48 (85%)
 Frame = -2

Query: 165 RYEDAKVESCERISIIPRGQSLSQTVFHRLGDESYIFECRPQLLHRFQ 22
           RYE AKVE C+RIS+IPRGQ+LSQ VF RL DESY+FE RPQLLHR Q
Sbjct: 678 RYESAKVERCDRISVIPRGQTLSQVVFDRLDDESYMFERRPQLLHRLQ 725



 Score = 78.6 bits (192), Expect(2) = 2e-30
 Identities = 40/54 (74%), Positives = 44/54 (81%)
 Frame = -3

Query: 329 AVRRGHGSILHSXXXXXXDHLTVGPKRVGIELGHQGQCGRATTEVGTAMTSYLL 168
           AVR+GH +IL S      D LTVGPKRVGIELGHQGQC RATTEVGTA+TS+LL
Sbjct: 623 AVRKGHEAILQSDVDEAVDRLTVGPKRVGIELGHQGQCRRATTEVGTAITSHLL 676


>ref|XP_002299463.1| predicted protein [Populus trichocarpa] gi|222846721|gb|EEE84268.1|
           predicted protein [Populus trichocarpa]
          Length = 932

 Score = 79.7 bits (195), Expect(2) = 7e-30
 Identities = 37/48 (77%), Positives = 42/48 (87%)
 Frame = -2

Query: 165 RYEDAKVESCERISIIPRGQSLSQTVFHRLGDESYIFECRPQLLHRFQ 22
           RYE+AKVE C+RISI+PRGQ+LSQ VFHRL DESY+FE  PQLLHR Q
Sbjct: 702 RYENAKVECCDRISIVPRGQTLSQLVFHRLDDESYMFERLPQLLHRLQ 749



 Score = 75.9 bits (185), Expect(2) = 7e-30
 Identities = 38/54 (70%), Positives = 42/54 (77%)
 Frame = -3

Query: 329 AVRRGHGSILHSXXXXXXDHLTVGPKRVGIELGHQGQCGRATTEVGTAMTSYLL 168
           AVR+GH +IL S      D LTVGPKRVGIELGHQGQC RATTE+G  MTS+LL
Sbjct: 647 AVRQGHAAILQSDMDDAVDRLTVGPKRVGIELGHQGQCRRATTELGVVMTSHLL 700


>ref|XP_003532440.1| PREDICTED: ATP-dependent zinc metalloprotease FTSH 2,
           chloroplastic-like [Glycine max]
          Length = 925

 Score = 81.6 bits (200), Expect(2) = 3e-29
 Identities = 38/48 (79%), Positives = 42/48 (87%)
 Frame = -2

Query: 165 RYEDAKVESCERISIIPRGQSLSQTVFHRLGDESYIFECRPQLLHRFQ 22
           RYE AKVE C+RISI+PRGQ+LSQ VFHRL DESY+FE RPQLLHR Q
Sbjct: 697 RYEHAKVECCDRISIVPRGQTLSQLVFHRLDDESYMFERRPQLLHRLQ 744



 Score = 72.0 bits (175), Expect(2) = 3e-29
 Identities = 37/54 (68%), Positives = 42/54 (77%)
 Frame = -3

Query: 329 AVRRGHGSILHSXXXXXXDHLTVGPKRVGIELGHQGQCGRATTEVGTAMTSYLL 168
           AVR+ H SIL S      D LTVGPKRVGIELG+QGQC RATTE+G A+TS+LL
Sbjct: 642 AVRKQHNSILQSDMDDAVDRLTVGPKRVGIELGYQGQCRRATTELGLALTSHLL 695


>ref|NP_567691.1| FtsH extracellular protease [Arabidopsis thaliana]
           gi|2262118|gb|AAB63626.1| cell division protein isolog
           [Arabidopsis thaliana] gi|4972098|emb|CAB43894.1| cell
           division protein-like [Arabidopsis thaliana]
           gi|7269243|emb|CAB81312.1| cell division protein-like
           [Arabidopsis thaliana] gi|332659430|gb|AEE84830.1| FtsH
           extracellular protease [Arabidopsis thaliana]
          Length = 946

 Score = 77.8 bits (190), Expect(2) = 4e-28
 Identities = 35/49 (71%), Positives = 42/49 (85%)
 Frame = -2

Query: 168 MRYEDAKVESCERISIIPRGQSLSQTVFHRLGDESYIFECRPQLLHRFQ 22
           +RYE+AK+E C+R+SIIPRGQ+LSQ VFHRL DESY+F   PQLLHR Q
Sbjct: 712 LRYENAKIERCDRVSIIPRGQTLSQVVFHRLDDESYMFGRLPQLLHRLQ 760



 Score = 72.0 bits (175), Expect(2) = 4e-28
 Identities = 36/54 (66%), Positives = 41/54 (75%)
 Frame = -3

Query: 329 AVRRGHGSILHSXXXXXXDHLTVGPKRVGIELGHQGQCGRATTEVGTAMTSYLL 168
           AVR+ H SIL S      D LTVGP R+G+ELGHQGQC RATTEVG A+TS+LL
Sbjct: 658 AVRKTHNSILQSDMDDAVDRLTVGPTRIGLELGHQGQCRRATTEVGVAITSHLL 711


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