BLASTX nr result

ID: Coptis21_contig00025391 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00025391
         (291 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282416.2| PREDICTED: protein TIFY 8-like [Vitis vinife...    65   4e-09
ref|XP_003526433.1| PREDICTED: protein TIFY 8-like [Glycine max]       60   2e-07
ref|XP_003522639.1| PREDICTED: protein TIFY 8-like [Glycine max]       58   7e-07
ref|XP_002324269.1| predicted protein [Populus trichocarpa] gi|2...    58   9e-07
ref|XP_002308637.1| predicted protein [Populus trichocarpa] gi|2...    58   9e-07

>ref|XP_002282416.2| PREDICTED: protein TIFY 8-like [Vitis vinifera]
           gi|296081988|emb|CBI20993.3| unnamed protein product
           [Vitis vinifera]
          Length = 441

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 42/92 (45%), Positives = 50/92 (54%), Gaps = 14/92 (15%)
 Frame = -1

Query: 237 LMMMAHQ---SNNNEKCKDSSGKLILHDFLGSTCASDTPVLVVPPV---HREIRLAEAS- 79
           +M M H    +NN      S    I HDFLG +CASD+PV+  P       + R +EAS 
Sbjct: 3   VMRMGHSKSIANNTGTASGSGMNPIFHDFLGMSCASDSPVVFAPKTVGHGGDARRSEASP 62

Query: 78  -------ASSGGLHGTISATSDLGSERQMGNH 4
                  ASSGG  G IS TSDLGSERQ G+H
Sbjct: 63  SASASAGASSGGGRGPISTTSDLGSERQAGDH 94


>ref|XP_003526433.1| PREDICTED: protein TIFY 8-like [Glycine max]
          Length = 413

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 40/85 (47%), Positives = 52/85 (61%), Gaps = 2/85 (2%)
 Frame = -1

Query: 249 MAVPLMMMAHQSNNNEKCKDSSGKLILHDFLGSTCASDTPVLVVPPVHREIRLAE--ASA 76
           MAV L+ MA   N N     S+ +L+LHDFLG   A+D+P         ++RL E  ASA
Sbjct: 1   MAV-LLRMAQPHNGNTN-NTSNQQLVLHDFLGMRPAADSPKTA------DVRLPEPSASA 52

Query: 75  SSGGLHGTISATSDLGSERQMGNHI 1
           SS G  G  SATSD+ SE+Q+GNH+
Sbjct: 53  SSTGGRGPFSATSDIASEKQVGNHL 77


>ref|XP_003522639.1| PREDICTED: protein TIFY 8-like [Glycine max]
          Length = 415

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 38/85 (44%), Positives = 51/85 (60%), Gaps = 2/85 (2%)
 Frame = -1

Query: 249 MAVPLMMMAHQSNNNEKCKDSSGKLILHDFLGSTCASDTPVLVVPPVHREIRLAE--ASA 76
           MAV L+ MA   N N     ++ +L+LHDFLG   A+D+P         ++R  E  ASA
Sbjct: 1   MAV-LLRMAQPHNGNTN-STANQQLVLHDFLGMKPAADSPQTA------DVRFPEPSASA 52

Query: 75  SSGGLHGTISATSDLGSERQMGNHI 1
           SS G  G  SATSD+ SE+Q+GNH+
Sbjct: 53  SSAGGRGPFSATSDIASEKQIGNHL 77


>ref|XP_002324269.1| predicted protein [Populus trichocarpa] gi|222865703|gb|EEF02834.1|
           predicted protein [Populus trichocarpa]
          Length = 440

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 37/103 (35%), Positives = 50/103 (48%), Gaps = 20/103 (19%)
 Frame = -1

Query: 249 MAVPLMMMAHQSNNNEKCKDSSG------------------KLILHDFLGSTCASDTPVL 124
           MA+ + M+    NNN     S+                   + + HDFLG    +D+PV+
Sbjct: 1   MAMVMTMVQQSKNNNANSGHSNSVNINNSTATSQQQQKQQVRAMFHDFLGMKATTDSPVV 60

Query: 123 VVPPVHREIRLAEAS--ASSGGLHGTISATSDLGSERQMGNHI 1
           + P        A AS  ASSGG  G +S+TSDL SERQ GNH+
Sbjct: 61  LAPKYKDGSPSASASLGASSGGGRGPLSSTSDLASERQAGNHL 103


>ref|XP_002308637.1| predicted protein [Populus trichocarpa] gi|222854613|gb|EEE92160.1|
           predicted protein [Populus trichocarpa]
          Length = 430

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 39/103 (37%), Positives = 49/103 (47%), Gaps = 20/103 (19%)
 Frame = -1

Query: 249 MAVPLMMMAHQSNNNEKCKDSSG------------------KLILHDFLGSTCASDTPVL 124
           MAV L M     NNN     ++                   K + HDFLG    +D+PV+
Sbjct: 1   MAVVLTMAQQSKNNNANSSHNNSVYVNNSTATSQQQQKQDLKAMFHDFLGMKGTTDSPVV 60

Query: 123 VVPPVHREIRLAEAS--ASSGGLHGTISATSDLGSERQMGNHI 1
           + P        A AS  ASSGG  G +S+TSDL SERQ GNH+
Sbjct: 61  LAPKNKDGSPSASASLGASSGGGRGPLSSTSDLASERQAGNHL 103


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