BLASTX nr result

ID: Coptis21_contig00025364 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00025364
         (401 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268271.1| PREDICTED: meiotically up-regulated gene 71 ...    74   2e-11
ref|NP_187098.2| endoribonuclease [Arabidopsis thaliana] gi|3326...    72   5e-11
gb|AAF63779.1| unknown protein [Arabidopsis thaliana]                  72   5e-11
ref|XP_002884445.1| endoribonuclease [Arabidopsis lyrata subsp. ...    72   6e-11
ref|XP_004155103.1| PREDICTED: meiotically up-regulated gene 71 ...    68   9e-10

>ref|XP_002268271.1| PREDICTED: meiotically up-regulated gene 71 protein [Vitis
           vinifera] gi|302143608|emb|CBI22361.3| unnamed protein
           product [Vitis vinifera]
          Length = 741

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 36/42 (85%), Positives = 39/42 (92%)
 Frame = -3

Query: 126 RHQKLSYRMTRGDEVEDMLILISEVKRQVPSITAVSSGAIAS 1
           RHQ LSYRMT+GDEVEDM IL+ EVKRQ+PSITAVSSGAIAS
Sbjct: 77  RHQNLSYRMTQGDEVEDMSILLEEVKRQIPSITAVSSGAIAS 118


>ref|NP_187098.2| endoribonuclease [Arabidopsis thaliana] gi|332640566|gb|AEE74087.1|
           endoribonuclease [Arabidopsis thaliana]
          Length = 718

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 35/42 (83%), Positives = 39/42 (92%)
 Frame = -3

Query: 126 RHQKLSYRMTRGDEVEDMLILISEVKRQVPSITAVSSGAIAS 1
           RHQKLSY+MT  DEVEDM +L+SEVKRQ+PSITAVSSGAIAS
Sbjct: 77  RHQKLSYQMTPDDEVEDMFVLLSEVKRQIPSITAVSSGAIAS 118


>gb|AAF63779.1| unknown protein [Arabidopsis thaliana]
          Length = 715

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 35/42 (83%), Positives = 39/42 (92%)
 Frame = -3

Query: 126 RHQKLSYRMTRGDEVEDMLILISEVKRQVPSITAVSSGAIAS 1
           RHQKLSY+MT  DEVEDM +L+SEVKRQ+PSITAVSSGAIAS
Sbjct: 77  RHQKLSYQMTPDDEVEDMFVLLSEVKRQIPSITAVSSGAIAS 118


>ref|XP_002884445.1| endoribonuclease [Arabidopsis lyrata subsp. lyrata]
           gi|297330285|gb|EFH60704.1| endoribonuclease
           [Arabidopsis lyrata subsp. lyrata]
          Length = 717

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 35/42 (83%), Positives = 39/42 (92%)
 Frame = -3

Query: 126 RHQKLSYRMTRGDEVEDMLILISEVKRQVPSITAVSSGAIAS 1
           RHQKLSY+MT  DEVEDM +L+SEVKRQ+PSITAVSSGAIAS
Sbjct: 77  RHQKLSYQMTPHDEVEDMFVLLSEVKRQIPSITAVSSGAIAS 118


>ref|XP_004155103.1| PREDICTED: meiotically up-regulated gene 71 protein-like [Cucumis
           sativus]
          Length = 735

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 32/42 (76%), Positives = 39/42 (92%)
 Frame = -3

Query: 126 RHQKLSYRMTRGDEVEDMLILISEVKRQVPSITAVSSGAIAS 1
           RHQKL+YR+T GDEVEDM IL++EVK+Q+PS+ AVSSGAIAS
Sbjct: 77  RHQKLNYRITPGDEVEDMYILLNEVKKQLPSVMAVSSGAIAS 118


Top