BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00025343
         (751 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512332.1| pentatricopeptide repeat-containing protein,...   254   2e-65
gb|AFK37616.1| unknown [Lotus japonicus]                              236   3e-60
ref|XP_004135632.1| PREDICTED: uncharacterized protein LOC101211...   231   1e-58
ref|XP_003556498.1| PREDICTED: probable 39S ribosomal protein L4...   231   1e-58
ref|XP_004157259.1| PREDICTED: probable 39S ribosomal protein L4...   230   2e-58

>ref|XP_002512332.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223548293|gb|EEF49784.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 619

 Score =  254 bits (648), Expect = 2e-65
 Identities = 129/234 (55%), Positives = 164/234 (70%), Gaps = 7/234 (2%)
 Frame = +3

Query: 69  QRSQMLRNLFKSLQVCQTQSLLGGSTSY-------AHLNAKEYFCRSFSNVSSYNGHGKY 227
           +R Q +R L ++ +      LL  S SY          N++  F      +S Y GH  +
Sbjct: 5   RRLQAIRALSRTAESRNPSCLLQSSRSYYSDFSNGLEFNSQRIF------LSPYKGHNAF 58

Query: 228 MWNQGRVTPLCSTKVTELPLLLNEVRAMSTQVKAPAQTRQMGAVQVSMLSPGIVYEPYAP 407
            W  G      S+   EL   +N+ R ++TQ +AP Q RQMGA++VS+ SPG +YEPYAP
Sbjct: 59  PWTHGSTMTHQSSTPIELSTFVNDKRLLTTQARAPPQARQMGALKVSVSSPGFIYEPYAP 118

Query: 408 REPISFLRRWFTRSGWRRTKEDMILELKSAYAINRLRKSGYSKKKFYKEAVILYKKINFL 587
           REPI F RRWFT+SGWRRTKED+ILELKSAYA+++LRKSGYSK + YKEA+ LYK+I+ +
Sbjct: 119 REPIPFWRRWFTKSGWRRTKEDIILELKSAYAVSKLRKSGYSKHQLYKEAIELYKEISTM 178

Query: 588 MANGDKKALRKVVTEQMYSALKNEIKYRESMWSSIYWELVEPSVKIRTLRARMI 749
           +ANGDK +LRK VTE+MYS LKNEIK RESMWS +YWELVEP +KIRTLRAR+I
Sbjct: 179 IANGDKNSLRKAVTEKMYSELKNEIKQRESMWSKVYWELVEPVIKIRTLRARLI 232


>gb|AFK37616.1| unknown [Lotus japonicus]
          Length = 305

 Score =  236 bits (603), Expect = 3e-60
 Identities = 123/234 (52%), Positives = 165/234 (70%), Gaps = 4/234 (1%)
 Frame = +3

Query: 60  MSFQRSQMLRNLFKSLQVCQTQS--LLGGSTSYAHL--NAKEYFCRSFSNVSSYNGHGKY 227
           M  +R   +R L++S Q+ Q  S  LLG   SY++   N  E   +SF +   +  H  +
Sbjct: 2   MPLKRFHAVRTLYRSSQIGQDSSSYLLGSCRSYSNALSNGSEGNFKSFHS-HLFKCHDGF 60

Query: 228 MWNQGRVTPLCSTKVTELPLLLNEVRAMSTQVKAPAQTRQMGAVQVSMLSPGIVYEPYAP 407
               G+   L ST   EL + +N+ R +STQ+K  + +R +G  Q+S+ SPG +YEPY P
Sbjct: 61  PLAGGKTLTLRSTMAAELSIFMNDKRMLSTQLKGSSLSRAVGT-QISVSSPGFIYEPYEP 119

Query: 408 REPISFLRRWFTRSGWRRTKEDMILELKSAYAINRLRKSGYSKKKFYKEAVILYKKINFL 587
           RE I F +RWFTRSGW+RTK+D+ILELKSAYAI +LRKSGYSK +FY EA  +YK+IN L
Sbjct: 120 REKIPFWQRWFTRSGWKRTKQDVILELKSAYAIQKLRKSGYSKSRFYNEAFKMYKEINAL 179

Query: 588 MANGDKKALRKVVTEQMYSALKNEIKYRESMWSSIYWELVEPSVKIRTLRARMI 749
           +ANGDKK+LRK VTE+MYSALKNEIK RE+ W+ +YWEL+EP +++RTLRAR+I
Sbjct: 180 IANGDKKSLRKAVTEKMYSALKNEIKQRETTWNKVYWELIEPVIRVRTLRARLI 233


>ref|XP_004135632.1| PREDICTED: uncharacterized protein LOC101211143 [Cucumis sativus]
          Length = 302

 Score =  231 bits (589), Expect = 1e-58
 Identities = 120/234 (51%), Positives = 163/234 (69%), Gaps = 4/234 (1%)
 Frame = +3

Query: 60  MSFQRSQMLRNLFKSLQVCQTQSLLGGSTSYAH--LNAKEYFCRSFSNVSSYNGHGKYMW 233
           M+F   + L+ L+++ ++    S +G S +Y+    N  +   +  S+  S N H  +  
Sbjct: 1   MNFITLRSLQTLYRTPKIRPFTSPIGSSANYSCGITNVSQLGIQKTSSFLS-NSHSAFSL 59

Query: 234 NQGRVTPLCSTKVTELPLLLNEV--RAMSTQVKAPAQTRQMGAVQVSMLSPGIVYEPYAP 407
            +G    +CS    E  +  + +  R ++TQVKAP Q RQ   ++V+MLSPG +YEPY+P
Sbjct: 60  ARGHKMIICSAVAAEFSVFSHGIGIRLVTTQVKAPPQARQKIGLKVTMLSPGFIYEPYSP 119

Query: 408 REPISFLRRWFTRSGWRRTKEDMILELKSAYAINRLRKSGYSKKKFYKEAVILYKKINFL 587
           R+ + F +RWFTRSGW+RTK+D+ILELKSAYAI +LRK GYSKKKFY+EA  LY++IN L
Sbjct: 120 RQQLPFWQRWFTRSGWKRTKDDIILELKSAYAIAKLRKKGYSKKKFYEEAANLYREINTL 179

Query: 588 MANGDKKALRKVVTEQMYSALKNEIKYRESMWSSIYWELVEPSVKIRTLRARMI 749
           +ANGDK +LRK VTE MYSALKNEIK RES WS +YWE++ P VKIRTLRAR+I
Sbjct: 180 IANGDKTSLRKAVTENMYSALKNEIKLRESKWSKVYWEMIVPVVKIRTLRARLI 233


>ref|XP_003556498.1| PREDICTED: probable 39S ribosomal protein L45, mitochondrial-like
           [Glycine max]
          Length = 309

 Score =  231 bits (589), Expect = 1e-58
 Identities = 126/231 (54%), Positives = 161/231 (69%), Gaps = 3/231 (1%)
 Frame = +3

Query: 66  FQRSQMLRNLFKSLQVCQTQS-LLGGSTSYAHL--NAKEYFCRSFSNVSSYNGHGKYMWN 236
           F+R  ++R L++S Q+ ++ S LLG   SY+    N  E   RSF +     G   + + 
Sbjct: 5   FKRLHLVRTLYRSSQIGESSSYLLGSCKSYSSALSNGSEGNFRSFHS-HLLKGQDGFPFA 63

Query: 237 QGRVTPLCSTKVTELPLLLNEVRAMSTQVKAPAQTRQMGAVQVSMLSPGIVYEPYAPREP 416
             +   L ST   EL + +N  R +STQVKA AQ RQ+G  Q+S+ SPG +YEPY PR+ 
Sbjct: 64  GVKSLTLRSTMAAELSIFMNNRRMLSTQVKASAQARQVGQ-QISLSSPGFIYEPYEPRDK 122

Query: 417 ISFLRRWFTRSGWRRTKEDMILELKSAYAINRLRKSGYSKKKFYKEAVILYKKINFLMAN 596
           I F +RWFTRSG RRTK D+ILELKSAYAI +LRK+GYSK +FY EA  +YK+IN L+A 
Sbjct: 123 IPFWKRWFTRSGLRRTKNDIILELKSAYAIAKLRKTGYSKNQFYNEAANMYKEINTLIAK 182

Query: 597 GDKKALRKVVTEQMYSALKNEIKYRESMWSSIYWELVEPSVKIRTLRARMI 749
           GDK+ LRK VTE M+SALKNEIK RE+ WS +YWE+VEP VKIRTLRAR+I
Sbjct: 183 GDKRTLRKAVTENMFSALKNEIKQRETAWSRVYWEMVEPVVKIRTLRARLI 233


>ref|XP_004157259.1| PREDICTED: probable 39S ribosomal protein L45, mitochondrial-like
           [Cucumis sativus]
          Length = 302

 Score =  230 bits (587), Expect = 2e-58
 Identities = 120/234 (51%), Positives = 163/234 (69%), Gaps = 4/234 (1%)
 Frame = +3

Query: 60  MSFQRSQMLRNLFKSLQVCQTQSLLGGSTSYAH--LNAKEYFCRSFSNVSSYNGHGKYMW 233
           M+F   + L+ L+++ ++    S +G S +Y+    N  +   +  S+  S N H  +  
Sbjct: 1   MNFITLRSLQTLYRTPKIRPFTSPIGSSANYSCGITNVSQLGIQKTSSFLS-NSHSAFSL 59

Query: 234 NQGRVTPLCSTKVTELPLLLNEV--RAMSTQVKAPAQTRQMGAVQVSMLSPGIVYEPYAP 407
            +G    +CS    E  +  + +  R ++TQVKAP Q RQ   ++V+MLSPG +YEPY+P
Sbjct: 60  ARGHKMIICSAVAAEFLVFSHGIGIRLVTTQVKAPPQARQKIGLKVTMLSPGFIYEPYSP 119

Query: 408 REPISFLRRWFTRSGWRRTKEDMILELKSAYAINRLRKSGYSKKKFYKEAVILYKKINFL 587
           R+ + F +RWFTRSGW+RTK+D+ILELKSAYAI +LRK GYSKKKFY+EA  LY++IN L
Sbjct: 120 RQQLPFWQRWFTRSGWKRTKDDIILELKSAYAIAKLRKKGYSKKKFYEEAANLYREINTL 179

Query: 588 MANGDKKALRKVVTEQMYSALKNEIKYRESMWSSIYWELVEPSVKIRTLRARMI 749
           +ANGDK +LRK VTE MYSALKNEIK RES WS +YWE++ P VKIRTLRAR+I
Sbjct: 180 IANGDKTSLRKAVTENMYSALKNEIKLRESKWSKVYWEMIVPVVKIRTLRARLI 233