BLASTX nr result

ID: Coptis21_contig00025330 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00025330
         (480 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264938.1| PREDICTED: uncharacterized protein LOC100248...    91   1e-16
emb|CAN63322.1| hypothetical protein VITISV_022239 [Vitis vinifera]    91   1e-16
emb|CAQ58620.1| unknown gene [Vitis vinifera]                          90   2e-16
ref|XP_002531821.1| conserved hypothetical protein [Ricinus comm...    86   4e-15
ref|XP_002323693.1| predicted protein [Populus trichocarpa] gi|2...    84   1e-14

>ref|XP_002264938.1| PREDICTED: uncharacterized protein LOC100248515 [Vitis vinifera]
           gi|296085821|emb|CBI31145.3| unnamed protein product
           [Vitis vinifera]
          Length = 215

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 42/85 (49%), Positives = 59/85 (69%)
 Frame = +3

Query: 207 TVFKVKDPTTTLVSTKVSGVSPSVKFPTLKIEMNITLDLKLSVHNPNRYSFKHGTGYSQV 386
           TVFK K P T LVS  + G+SP + FP ++I++NITL+L++ V NPN  SFKHG+G S +
Sbjct: 54  TVFKAKQPKTQLVSATLDGISPRISFPVVRIQLNITLNLQILVENPNHASFKHGSGQSIL 113

Query: 387 YYQNDQVAVADIAPGKISEKKSSGI 461
            YQ +QV   +I PG I  ++S+ I
Sbjct: 114 LYQGEQVGDVEIYPGNIPGRRSTTI 138


>emb|CAN63322.1| hypothetical protein VITISV_022239 [Vitis vinifera]
          Length = 436

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 42/85 (49%), Positives = 59/85 (69%)
 Frame = +3

Query: 207 TVFKVKDPTTTLVSTKVSGVSPSVKFPTLKIEMNITLDLKLSVHNPNRYSFKHGTGYSQV 386
           TVFK K P T LVS  + G+SP + FP ++I++NITL+L++ V NPN  SFKHG+G S +
Sbjct: 275 TVFKAKQPKTQLVSATLDGISPRISFPVVRIQLNITLNLQILVENPNHASFKHGSGQSIL 334

Query: 387 YYQNDQVAVADIAPGKISEKKSSGI 461
            YQ +QV   +I PG I  ++S+ I
Sbjct: 335 LYQGEQVGDVEIYPGNIPGRRSTTI 359



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 29/90 (32%), Positives = 48/90 (53%)
 Frame = +3

Query: 204 FTVFKVKDPTTTLVSTKVSGVSPSVKFPTLKIEMNITLDLKLSVHNPNRYSFKHGTGYSQ 383
           FTVFK KDP  T+ S  +  +     F    + +N +LD+ +SV NPNR  F++    + 
Sbjct: 62  FTVFKAKDPVITVGSVSLKDLD----FSLTPLNINASLDVNVSVRNPNRVGFRYNNASAL 117

Query: 384 VYYQNDQVAVADIAPGKISEKKSSGIDATV 473
           + Y    V  A I  G+I  +K++G++  +
Sbjct: 118 LNYDGSLVGEAPIPAGRIGARKTTGMNIVI 147


>emb|CAQ58620.1| unknown gene [Vitis vinifera]
          Length = 215

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 42/85 (49%), Positives = 58/85 (68%)
 Frame = +3

Query: 207 TVFKVKDPTTTLVSTKVSGVSPSVKFPTLKIEMNITLDLKLSVHNPNRYSFKHGTGYSQV 386
           TVFK K P T LVS  + G+SP + FP ++I++NITL+L++ V NPN  SFKHG+G S +
Sbjct: 54  TVFKAKQPKTQLVSATLDGISPRISFPVVRIQLNITLNLQILVENPNHASFKHGSGQSIL 113

Query: 387 YYQNDQVAVADIAPGKISEKKSSGI 461
            YQ  QV   +I PG I  ++S+ I
Sbjct: 114 LYQGGQVGDVEIYPGNIPGRRSTTI 138


>ref|XP_002531821.1| conserved hypothetical protein [Ricinus communis]
           gi|223528555|gb|EEF30578.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 204

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 39/83 (46%), Positives = 55/83 (66%)
 Frame = +3

Query: 207 TVFKVKDPTTTLVSTKVSGVSPSVKFPTLKIEMNITLDLKLSVHNPNRYSFKHGTGYSQV 386
           TVFK K+P   LVS  + G+SP + FP + I++NI+L+L L VHN N  SFKHG G + +
Sbjct: 43  TVFKAKEPKVDLVSATLDGISPRISFPVINIQLNISLNLNLLVHNRNYASFKHGAGKTSL 102

Query: 387 YYQNDQVAVADIAPGKISEKKSS 455
            YQ+ Q+  AD+ PG I  + S+
Sbjct: 103 LYQDKQIGEADLYPGVIPSRGSA 125


>ref|XP_002323693.1| predicted protein [Populus trichocarpa] gi|222868323|gb|EEF05454.1|
           predicted protein [Populus trichocarpa]
          Length = 201

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 40/91 (43%), Positives = 57/91 (62%)
 Frame = +3

Query: 207 TVFKVKDPTTTLVSTKVSGVSPSVKFPTLKIEMNITLDLKLSVHNPNRYSFKHGTGYSQV 386
           TVFK K P T L+S  + G+SP +  P + I++NITL+L L V NPN  SFKHG G S +
Sbjct: 40  TVFKPKAPQTQLLSATLEGISPRISLPVVNIQLNITLNLTLLVKNPNHVSFKHGPGKSYL 99

Query: 387 YYQNDQVAVADIAPGKISEKKSSGIDATVIV 479
            Y+ D+V  AD+ PG I  K +  + + + +
Sbjct: 100 LYRGDEVGDADLYPGLIPSKGTETLPSRLTI 130


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