BLASTX nr result
ID: Coptis21_contig00025314
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00025314 (263 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002314895.1| white-brown-complex ABC transporter family [... 147 1e-33 ref|XP_003631190.1| PREDICTED: LOW QUALITY PROTEIN: ABC transpor... 146 2e-33 emb|CBI27088.3| unnamed protein product [Vitis vinifera] 146 2e-33 emb|CAN62390.1| hypothetical protein VITISV_039480 [Vitis vinifera] 146 2e-33 ref|XP_002524381.1| ATP-binding cassette transporter, putative [... 142 4e-32 >ref|XP_002314895.1| white-brown-complex ABC transporter family [Populus trichocarpa] gi|222863935|gb|EEF01066.1| white-brown-complex ABC transporter family [Populus trichocarpa] Length = 683 Score = 147 bits (370), Expect = 1e-33 Identities = 72/87 (82%), Positives = 79/87 (90%) Frame = +3 Query: 3 TTLLTALAGRLPGKASGTITYNGLPFSGYIKRKTGFVTQDDMFYPHLTVFETLTYAALLR 182 TTLLTALAGRLPGK SGTITYNG FS +KR+TGFVTQDD+ YPHLTV ETLTYAALLR Sbjct: 132 TTLLTALAGRLPGKVSGTITYNGQAFSSSMKRRTGFVTQDDVLYPHLTVLETLTYAALLR 191 Query: 183 LPKQLGRQEKIEQAEVVIMELGLTKCR 263 LPK+L RQEKIEQAE++IMELGLT+CR Sbjct: 192 LPKKLTRQEKIEQAELIIMELGLTRCR 218 >ref|XP_003631190.1| PREDICTED: LOW QUALITY PROTEIN: ABC transporter G family member 21-like [Vitis vinifera] Length = 677 Score = 146 bits (369), Expect = 2e-33 Identities = 71/87 (81%), Positives = 79/87 (90%) Frame = +3 Query: 3 TTLLTALAGRLPGKASGTITYNGLPFSGYIKRKTGFVTQDDMFYPHLTVFETLTYAALLR 182 TTLLTALAGRLPGK SG ITYNG PFS +KRKTGFVTQDD+ YPHLTV ETLTYAALLR Sbjct: 123 TTLLTALAGRLPGKVSGNITYNGQPFSSSMKRKTGFVTQDDVLYPHLTVLETLTYAALLR 182 Query: 183 LPKQLGRQEKIEQAEVVIMELGLTKCR 263 LPK+L R+EKIEQAE++I+ELGLT+CR Sbjct: 183 LPKKLTREEKIEQAELIIVELGLTRCR 209 >emb|CBI27088.3| unnamed protein product [Vitis vinifera] Length = 676 Score = 146 bits (369), Expect = 2e-33 Identities = 71/87 (81%), Positives = 79/87 (90%) Frame = +3 Query: 3 TTLLTALAGRLPGKASGTITYNGLPFSGYIKRKTGFVTQDDMFYPHLTVFETLTYAALLR 182 TTLLTALAGRLPGK SG ITYNG PFS +KRKTGFVTQDD+ YPHLTV ETLTYAALLR Sbjct: 123 TTLLTALAGRLPGKVSGNITYNGQPFSSSMKRKTGFVTQDDVLYPHLTVLETLTYAALLR 182 Query: 183 LPKQLGRQEKIEQAEVVIMELGLTKCR 263 LPK+L R+EKIEQAE++I+ELGLT+CR Sbjct: 183 LPKKLTREEKIEQAELIIVELGLTRCR 209 >emb|CAN62390.1| hypothetical protein VITISV_039480 [Vitis vinifera] Length = 696 Score = 146 bits (369), Expect = 2e-33 Identities = 71/87 (81%), Positives = 79/87 (90%) Frame = +3 Query: 3 TTLLTALAGRLPGKASGTITYNGLPFSGYIKRKTGFVTQDDMFYPHLTVFETLTYAALLR 182 TTLLTALAGRLPGK SG ITYNG PFS +KRKTGFVTQDD+ YPHLTV ETLTYAALLR Sbjct: 143 TTLLTALAGRLPGKVSGNITYNGQPFSSSMKRKTGFVTQDDVLYPHLTVLETLTYAALLR 202 Query: 183 LPKQLGRQEKIEQAEVVIMELGLTKCR 263 LPK+L R+EKIEQAE++I+ELGLT+CR Sbjct: 203 LPKKLTREEKIEQAELIIVELGLTRCR 229 >ref|XP_002524381.1| ATP-binding cassette transporter, putative [Ricinus communis] gi|223536342|gb|EEF37992.1| ATP-binding cassette transporter, putative [Ricinus communis] Length = 709 Score = 142 bits (357), Expect = 4e-32 Identities = 69/87 (79%), Positives = 77/87 (88%) Frame = +3 Query: 3 TTLLTALAGRLPGKASGTITYNGLPFSGYIKRKTGFVTQDDMFYPHLTVFETLTYAALLR 182 TTLLTAL+GRLP K SGTITYNGLP+S +KR TGFV QDD+ YPHLTV ETLTYAALLR Sbjct: 155 TTLLTALSGRLPVKVSGTITYNGLPYSSSMKRNTGFVAQDDILYPHLTVIETLTYAALLR 214 Query: 183 LPKQLGRQEKIEQAEVVIMELGLTKCR 263 LPK+L +QEKIEQAE+VIMELGL +CR Sbjct: 215 LPKKLSKQEKIEQAEMVIMELGLNRCR 241