BLASTX nr result

ID: Coptis21_contig00025314 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00025314
         (263 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314895.1| white-brown-complex ABC transporter family [...   147   1e-33
ref|XP_003631190.1| PREDICTED: LOW QUALITY PROTEIN: ABC transpor...   146   2e-33
emb|CBI27088.3| unnamed protein product [Vitis vinifera]              146   2e-33
emb|CAN62390.1| hypothetical protein VITISV_039480 [Vitis vinifera]   146   2e-33
ref|XP_002524381.1| ATP-binding cassette transporter, putative [...   142   4e-32

>ref|XP_002314895.1| white-brown-complex ABC transporter family [Populus trichocarpa]
           gi|222863935|gb|EEF01066.1| white-brown-complex ABC
           transporter family [Populus trichocarpa]
          Length = 683

 Score =  147 bits (370), Expect = 1e-33
 Identities = 72/87 (82%), Positives = 79/87 (90%)
 Frame = +3

Query: 3   TTLLTALAGRLPGKASGTITYNGLPFSGYIKRKTGFVTQDDMFYPHLTVFETLTYAALLR 182
           TTLLTALAGRLPGK SGTITYNG  FS  +KR+TGFVTQDD+ YPHLTV ETLTYAALLR
Sbjct: 132 TTLLTALAGRLPGKVSGTITYNGQAFSSSMKRRTGFVTQDDVLYPHLTVLETLTYAALLR 191

Query: 183 LPKQLGRQEKIEQAEVVIMELGLTKCR 263
           LPK+L RQEKIEQAE++IMELGLT+CR
Sbjct: 192 LPKKLTRQEKIEQAELIIMELGLTRCR 218


>ref|XP_003631190.1| PREDICTED: LOW QUALITY PROTEIN: ABC transporter G family member
           21-like [Vitis vinifera]
          Length = 677

 Score =  146 bits (369), Expect = 2e-33
 Identities = 71/87 (81%), Positives = 79/87 (90%)
 Frame = +3

Query: 3   TTLLTALAGRLPGKASGTITYNGLPFSGYIKRKTGFVTQDDMFYPHLTVFETLTYAALLR 182
           TTLLTALAGRLPGK SG ITYNG PFS  +KRKTGFVTQDD+ YPHLTV ETLTYAALLR
Sbjct: 123 TTLLTALAGRLPGKVSGNITYNGQPFSSSMKRKTGFVTQDDVLYPHLTVLETLTYAALLR 182

Query: 183 LPKQLGRQEKIEQAEVVIMELGLTKCR 263
           LPK+L R+EKIEQAE++I+ELGLT+CR
Sbjct: 183 LPKKLTREEKIEQAELIIVELGLTRCR 209


>emb|CBI27088.3| unnamed protein product [Vitis vinifera]
          Length = 676

 Score =  146 bits (369), Expect = 2e-33
 Identities = 71/87 (81%), Positives = 79/87 (90%)
 Frame = +3

Query: 3   TTLLTALAGRLPGKASGTITYNGLPFSGYIKRKTGFVTQDDMFYPHLTVFETLTYAALLR 182
           TTLLTALAGRLPGK SG ITYNG PFS  +KRKTGFVTQDD+ YPHLTV ETLTYAALLR
Sbjct: 123 TTLLTALAGRLPGKVSGNITYNGQPFSSSMKRKTGFVTQDDVLYPHLTVLETLTYAALLR 182

Query: 183 LPKQLGRQEKIEQAEVVIMELGLTKCR 263
           LPK+L R+EKIEQAE++I+ELGLT+CR
Sbjct: 183 LPKKLTREEKIEQAELIIVELGLTRCR 209


>emb|CAN62390.1| hypothetical protein VITISV_039480 [Vitis vinifera]
          Length = 696

 Score =  146 bits (369), Expect = 2e-33
 Identities = 71/87 (81%), Positives = 79/87 (90%)
 Frame = +3

Query: 3   TTLLTALAGRLPGKASGTITYNGLPFSGYIKRKTGFVTQDDMFYPHLTVFETLTYAALLR 182
           TTLLTALAGRLPGK SG ITYNG PFS  +KRKTGFVTQDD+ YPHLTV ETLTYAALLR
Sbjct: 143 TTLLTALAGRLPGKVSGNITYNGQPFSSSMKRKTGFVTQDDVLYPHLTVLETLTYAALLR 202

Query: 183 LPKQLGRQEKIEQAEVVIMELGLTKCR 263
           LPK+L R+EKIEQAE++I+ELGLT+CR
Sbjct: 203 LPKKLTREEKIEQAELIIVELGLTRCR 229


>ref|XP_002524381.1| ATP-binding cassette transporter, putative [Ricinus communis]
           gi|223536342|gb|EEF37992.1| ATP-binding cassette
           transporter, putative [Ricinus communis]
          Length = 709

 Score =  142 bits (357), Expect = 4e-32
 Identities = 69/87 (79%), Positives = 77/87 (88%)
 Frame = +3

Query: 3   TTLLTALAGRLPGKASGTITYNGLPFSGYIKRKTGFVTQDDMFYPHLTVFETLTYAALLR 182
           TTLLTAL+GRLP K SGTITYNGLP+S  +KR TGFV QDD+ YPHLTV ETLTYAALLR
Sbjct: 155 TTLLTALSGRLPVKVSGTITYNGLPYSSSMKRNTGFVAQDDILYPHLTVIETLTYAALLR 214

Query: 183 LPKQLGRQEKIEQAEVVIMELGLTKCR 263
           LPK+L +QEKIEQAE+VIMELGL +CR
Sbjct: 215 LPKKLSKQEKIEQAEMVIMELGLNRCR 241


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