BLASTX nr result

ID: Coptis21_contig00025300 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00025300
         (788 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI23671.3| unnamed protein product [Vitis vinifera]              268   1e-69
ref|XP_002281630.1| PREDICTED: kinesin-like protein KIF11-like [...   268   1e-69
emb|CAN66120.1| hypothetical protein VITISV_002804 [Vitis vinifera]   265   8e-69
ref|XP_003535429.1| PREDICTED: kinesin-like protein KIF11-like [...   249   6e-64
ref|XP_002312587.1| predicted protein [Populus trichocarpa] gi|2...   248   1e-63

>emb|CBI23671.3| unnamed protein product [Vitis vinifera]
          Length = 631

 Score =  268 bits (684), Expect = 1e-69
 Identities = 131/186 (70%), Positives = 157/186 (84%), Gaps = 5/186 (2%)
 Frame = -2

Query: 544 RTPQSKHRLHFNSAKSTHPSPNP--ALKETALTEHPVEVVGHICGYPDQKEKPISALNIS 371
           +TP SKHRLHFN  K T PSPNP    KET   EHPVEV+G I  YPD+K+KP+S L+I+
Sbjct: 18  KTPNSKHRLHFNGGKVTQPSPNPHSVAKETPPAEHPVEVIGRIRDYPDRKDKPLSILHIN 77

Query: 370 SDKCSIRVRTEIGYRDFSLDGVSVSRDEDLDMFYEKFIKSRISGVKLGEKCTIMMYGPTG 191
            D+ ++RVRT+IGYRDFSLDGVS+S +ED+D FY+KF++SRI+GVK+GEKCTIMMYGPTG
Sbjct: 78  PDRQTVRVRTDIGYRDFSLDGVSLSEEEDIDGFYKKFVESRINGVKMGEKCTIMMYGPTG 137

Query: 190 SGKSHTMFGCVKQPGIVYRALKDILGD-DNEMDG--VHIGLGSFVQVSVLEIYNEEIYDL 20
           SGKSHTMFGC KQPGIVYR+LKDILG  D E DG    +G+G+FVQV+VLEIYNEEIYDL
Sbjct: 138 SGKSHTMFGCSKQPGIVYRSLKDILGGADEENDGNEQRVGVGTFVQVTVLEIYNEEIYDL 197

Query: 19  LSNNSG 2
           LS+N+G
Sbjct: 198 LSSNTG 203


>ref|XP_002281630.1| PREDICTED: kinesin-like protein KIF11-like [Vitis vinifera]
          Length = 929

 Score =  268 bits (684), Expect = 1e-69
 Identities = 131/186 (70%), Positives = 157/186 (84%), Gaps = 5/186 (2%)
 Frame = -2

Query: 544 RTPQSKHRLHFNSAKSTHPSPNP--ALKETALTEHPVEVVGHICGYPDQKEKPISALNIS 371
           +TP SKHRLHFN  K T PSPNP    KET   EHPVEV+G I  YPD+K+KP+S L+I+
Sbjct: 18  KTPNSKHRLHFNGGKVTQPSPNPHSVAKETPPAEHPVEVIGRIRDYPDRKDKPLSILHIN 77

Query: 370 SDKCSIRVRTEIGYRDFSLDGVSVSRDEDLDMFYEKFIKSRISGVKLGEKCTIMMYGPTG 191
            D+ ++RVRT+IGYRDFSLDGVS+S +ED+D FY+KF++SRI+GVK+GEKCTIMMYGPTG
Sbjct: 78  PDRQTVRVRTDIGYRDFSLDGVSLSEEEDIDGFYKKFVESRINGVKMGEKCTIMMYGPTG 137

Query: 190 SGKSHTMFGCVKQPGIVYRALKDILGD-DNEMDG--VHIGLGSFVQVSVLEIYNEEIYDL 20
           SGKSHTMFGC KQPGIVYR+LKDILG  D E DG    +G+G+FVQV+VLEIYNEEIYDL
Sbjct: 138 SGKSHTMFGCSKQPGIVYRSLKDILGGADEENDGNEQRVGVGTFVQVTVLEIYNEEIYDL 197

Query: 19  LSNNSG 2
           LS+N+G
Sbjct: 198 LSSNTG 203


>emb|CAN66120.1| hypothetical protein VITISV_002804 [Vitis vinifera]
          Length = 980

 Score =  265 bits (677), Expect = 8e-69
 Identities = 130/186 (69%), Positives = 156/186 (83%), Gaps = 5/186 (2%)
 Frame = -2

Query: 544 RTPQSKHRLHFNSAKSTHPSPNP--ALKETALTEHPVEVVGHICGYPDQKEKPISALNIS 371
           +TP SKHRLHFN  K T PSPNP    KET   EHPVEV+G I  YPD+K+KP+S L+I+
Sbjct: 18  KTPNSKHRLHFNGGKVTQPSPNPHSVAKETPPAEHPVEVIGRIRDYPDRKDKPLSILHIN 77

Query: 370 SDKCSIRVRTEIGYRDFSLDGVSVSRDEDLDMFYEKFIKSRISGVKLGEKCTIMMYGPTG 191
            D+ ++RV T+IGYRDFSLDGVS+S +ED+D FY+KF++SRI+GVK+GEKCTIMMYGPTG
Sbjct: 78  PDRQTVRVLTDIGYRDFSLDGVSLSEEEDIDGFYKKFVESRINGVKMGEKCTIMMYGPTG 137

Query: 190 SGKSHTMFGCVKQPGIVYRALKDILGD-DNEMDG--VHIGLGSFVQVSVLEIYNEEIYDL 20
           SGKSHTMFGC KQPGIVYR+LKDILG  D E DG    +G+G+FVQV+VLEIYNEEIYDL
Sbjct: 138 SGKSHTMFGCSKQPGIVYRSLKDILGGADEENDGNEQRVGVGTFVQVTVLEIYNEEIYDL 197

Query: 19  LSNNSG 2
           LS+N+G
Sbjct: 198 LSSNTG 203


>ref|XP_003535429.1| PREDICTED: kinesin-like protein KIF11-like [Glycine max]
          Length = 756

 Score =  249 bits (635), Expect = 6e-64
 Identities = 129/188 (68%), Positives = 151/188 (80%), Gaps = 7/188 (3%)
 Frame = -2

Query: 544 RTPQSKHRLHFNSAKS---THPSPNP---ALKETALTEHPVEVVGHICGYPDQKEKPISA 383
           +TPQSKHRL+FN+ KS   THPSPNP   A KE    EHP+EV+  I  YPD+K+KP+S 
Sbjct: 16  KTPQSKHRLNFNALKSAPQTHPSPNPNSVANKEPP-PEHPIEVIARIRDYPDRKDKPLSV 74

Query: 382 LNISSDKCSIRVRTEIGYRDFSLDGVSVSRDEDLDMFYEKFIKSRISGVKLGEKCTIMMY 203
           L  SS+  SIRVR + GYRDF+LDGVSVS +EDLD+FY+KF++SRI GVKLG+KCTIMMY
Sbjct: 75  LQTSSNSSSIRVRADFGYRDFTLDGVSVSEEEDLDVFYKKFVESRIHGVKLGDKCTIMMY 134

Query: 202 GPTGSGKSHTMFGCVKQPGIVYRALKDILGDDNEMDG-VHIGLGSFVQVSVLEIYNEEIY 26
           GPTGSGKSHTMFG  KQ GIVYR+L+DILGD +  DG    GLG+FVQV+VLEIYNEEIY
Sbjct: 135 GPTGSGKSHTMFGSSKQAGIVYRSLRDILGDGDGADGDSGGGLGTFVQVTVLEIYNEEIY 194

Query: 25  DLLSNNSG 2
           DLLS N G
Sbjct: 195 DLLSTNGG 202


>ref|XP_002312587.1| predicted protein [Populus trichocarpa] gi|222852407|gb|EEE89954.1|
           predicted protein [Populus trichocarpa]
          Length = 915

 Score =  248 bits (633), Expect = 1e-63
 Identities = 128/189 (67%), Positives = 151/189 (79%), Gaps = 8/189 (4%)
 Frame = -2

Query: 544 RTPQSKHRLHFNSAK--STHPSPNP--ALKETALTEHPVEVVGHICGYPDQKEKPISALN 377
           +TPQSKHRL+F+S +  S +PSPNP   +KET   +HP+EV+  I  YPD+KEKP S L 
Sbjct: 19  KTPQSKHRLNFSSTRTPSLNPSPNPNSTVKETP-QDHPIEVISRIRDYPDKKEKPNSILQ 77

Query: 376 ISSDKCSIRVRTEIGYRDFSLDGVSVSRDEDLDMFYEKFIKSRISGVKLGEKCTIMMYGP 197
           I+ D  ++RVR +IGYRDFSLDGVS S +EDLD FY+KF++SRI+GVKLG KCTIMMYGP
Sbjct: 78  INPDNQTLRVRADIGYRDFSLDGVSFSEEEDLDSFYKKFVESRITGVKLGAKCTIMMYGP 137

Query: 196 TGSGKSHTMFGCVKQPGIVYRALKDILGDDNE----MDGVHIGLGSFVQVSVLEIYNEEI 29
           TGSGKSHTMFGC KQPGIVYR+LKDILG   E     DG  I +G+FVQV+VLEIYNEEI
Sbjct: 138 TGSGKSHTMFGCSKQPGIVYRSLKDILGGGEEGSEGGDGEEIRIGTFVQVTVLEIYNEEI 197

Query: 28  YDLLSNNSG 2
           YDLLS NSG
Sbjct: 198 YDLLSTNSG 206


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