BLASTX nr result

ID: Coptis21_contig00025299 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00025299
         (211 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003552054.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   137   9e-31
ref|XP_002298317.1| predicted protein [Populus trichocarpa] gi|2...   135   3e-30
ref|XP_002529205.1| dead box ATP-dependent RNA helicase, putativ...   135   4e-30
ref|XP_003634187.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   132   3e-29
emb|CBI15398.3| unnamed protein product [Vitis vinifera]              132   3e-29

>ref|XP_003552054.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 27-like [Glycine
           max]
          Length = 542

 Score =  137 bits (345), Expect = 9e-31
 Identities = 67/70 (95%), Positives = 70/70 (100%)
 Frame = -1

Query: 211 QTLGLVIGGAGRKGEAERLVKGVNLLVATPGRLLDHLQNTKGFIYKNLKCLVIDEADRIL 32
           QTLGLVIGG+GRKGEAER+VKGVNLLVATPGRLLDHLQNTKGFIYKNLKCL+IDEADRIL
Sbjct: 178 QTLGLVIGGSGRKGEAERIVKGVNLLVATPGRLLDHLQNTKGFIYKNLKCLMIDEADRIL 237

Query: 31  EANFEEEMKQ 2
           EANFEEEMKQ
Sbjct: 238 EANFEEEMKQ 247


>ref|XP_002298317.1| predicted protein [Populus trichocarpa] gi|222845575|gb|EEE83122.1|
           predicted protein [Populus trichocarpa]
          Length = 574

 Score =  135 bits (340), Expect = 3e-30
 Identities = 67/70 (95%), Positives = 68/70 (97%)
 Frame = -1

Query: 211 QTLGLVIGGAGRKGEAERLVKGVNLLVATPGRLLDHLQNTKGFIYKNLKCLVIDEADRIL 32
           QTLGLVIGGA R+GEAERLVKGVNLLVATPGRLLDHLQNTKGFIYKNLKCL IDEADRIL
Sbjct: 189 QTLGLVIGGAARRGEAERLVKGVNLLVATPGRLLDHLQNTKGFIYKNLKCLTIDEADRIL 248

Query: 31  EANFEEEMKQ 2
           EANFEEEMKQ
Sbjct: 249 EANFEEEMKQ 258


>ref|XP_002529205.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223531323|gb|EEF33161.1| dead box ATP-dependent RNA
           helicase, putative [Ricinus communis]
          Length = 590

 Score =  135 bits (339), Expect = 4e-30
 Identities = 66/70 (94%), Positives = 69/70 (98%)
 Frame = -1

Query: 211 QTLGLVIGGAGRKGEAERLVKGVNLLVATPGRLLDHLQNTKGFIYKNLKCLVIDEADRIL 32
           QTLGLVIGG+ RKGEAER+VKGVNLLVATPGRLLDHLQNTKGFIYKNLKCL+IDEADRIL
Sbjct: 205 QTLGLVIGGSARKGEAERIVKGVNLLVATPGRLLDHLQNTKGFIYKNLKCLMIDEADRIL 264

Query: 31  EANFEEEMKQ 2
           EANFEEEMKQ
Sbjct: 265 EANFEEEMKQ 274


>ref|XP_003634187.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 51-like isoform 2
           [Vitis vinifera]
          Length = 503

 Score =  132 bits (332), Expect = 3e-29
 Identities = 64/70 (91%), Positives = 67/70 (95%)
 Frame = -1

Query: 211 QTLGLVIGGAGRKGEAERLVKGVNLLVATPGRLLDHLQNTKGFIYKNLKCLVIDEADRIL 32
           QTLGLVIGG+ R+GEAERL KG NLLVATPGRLLDHLQNTKGFIYKNLKCL+IDEADRIL
Sbjct: 193 QTLGLVIGGSARRGEAERLAKGANLLVATPGRLLDHLQNTKGFIYKNLKCLIIDEADRIL 252

Query: 31  EANFEEEMKQ 2
           EANFEEEMKQ
Sbjct: 253 EANFEEEMKQ 262


>emb|CBI15398.3| unnamed protein product [Vitis vinifera]
          Length = 492

 Score =  132 bits (332), Expect = 3e-29
 Identities = 64/70 (91%), Positives = 67/70 (95%)
 Frame = -1

Query: 211 QTLGLVIGGAGRKGEAERLVKGVNLLVATPGRLLDHLQNTKGFIYKNLKCLVIDEADRIL 32
           QTLGLVIGG+ R+GEAERL KG NLLVATPGRLLDHLQNTKGFIYKNLKCL+IDEADRIL
Sbjct: 105 QTLGLVIGGSARRGEAERLAKGANLLVATPGRLLDHLQNTKGFIYKNLKCLIIDEADRIL 164

Query: 31  EANFEEEMKQ 2
           EANFEEEMKQ
Sbjct: 165 EANFEEEMKQ 174


Top