BLASTX nr result
ID: Coptis21_contig00025256
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00025256 (279 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002330544.1| predicted protein [Populus trichocarpa] gi|2... 115 5e-24 ref|XP_002264234.1| PREDICTED: uncharacterized protein LOC100249... 109 2e-22 emb|CAN70940.1| hypothetical protein VITISV_001966 [Vitis vinifera] 109 2e-22 ref|XP_002300576.1| predicted protein [Populus trichocarpa] gi|2... 106 2e-21 ref|XP_002519626.1| conserved hypothetical protein [Ricinus comm... 104 8e-21 >ref|XP_002330544.1| predicted protein [Populus trichocarpa] gi|222872102|gb|EEF09233.1| predicted protein [Populus trichocarpa] Length = 197 Score = 115 bits (287), Expect = 5e-24 Identities = 54/93 (58%), Positives = 67/93 (72%) Frame = +1 Query: 1 AFCCVIFSVXXXXXXXXXXXXXXVVKPKYPLFILTSASLNSIYLDSAEYMNGDFTFIAKF 180 A C+IFS+ V+KP+ P+F + +A+LNS+Y DS EY NGD TF+A F Sbjct: 20 AILCLIFSLVLIIFGIATLIIYLVIKPRNPVFDIPNANLNSVYFDSPEYFNGDLTFLANF 79 Query: 181 SNPNRKMDVRFDYLDIELYFLDRLIATQALQPF 279 SNPNRK+DVRF+Y+DIELYF DRLI TQALQPF Sbjct: 80 SNPNRKIDVRFEYVDIELYFSDRLIGTQALQPF 112 >ref|XP_002264234.1| PREDICTED: uncharacterized protein LOC100249744 [Vitis vinifera] Length = 217 Score = 109 bits (273), Expect = 2e-22 Identities = 52/93 (55%), Positives = 64/93 (68%) Frame = +1 Query: 1 AFCCVIFSVXXXXXXXXXXXXXXVVKPKYPLFILTSASLNSIYLDSAEYMNGDFTFIAKF 180 A C+IFS+ V+KPK PLF + SL+S+Y DS EY NGDFTF+A F Sbjct: 39 AILCLIFSLILIFFGIATLIIFLVIKPKTPLFDIPGVSLSSVYFDSPEYFNGDFTFLANF 98 Query: 181 SNPNRKMDVRFDYLDIELYFLDRLIATQALQPF 279 SNPNRK++VRF+Y+ IELYF DRLI TQ L+PF Sbjct: 99 SNPNRKINVRFEYVYIELYFFDRLIGTQTLEPF 131 >emb|CAN70940.1| hypothetical protein VITISV_001966 [Vitis vinifera] Length = 231 Score = 109 bits (273), Expect = 2e-22 Identities = 52/93 (55%), Positives = 64/93 (68%) Frame = +1 Query: 1 AFCCVIFSVXXXXXXXXXXXXXXVVKPKYPLFILTSASLNSIYLDSAEYMNGDFTFIAKF 180 A C+IFS+ V+KPK PLF + SL+S+Y DS EY NGDFTF+A F Sbjct: 53 AILCLIFSLLLIFFGIATLIIFLVIKPKTPLFDIPGVSLSSVYFDSPEYFNGDFTFLANF 112 Query: 181 SNPNRKMDVRFDYLDIELYFLDRLIATQALQPF 279 SNPNRK++VRF+Y+ IELYF DRLI TQ L+PF Sbjct: 113 SNPNRKINVRFEYVYIELYFFDRLIGTQTLEPF 145 >ref|XP_002300576.1| predicted protein [Populus trichocarpa] gi|222847834|gb|EEE85381.1| predicted protein [Populus trichocarpa] Length = 179 Score = 106 bits (264), Expect = 2e-21 Identities = 48/70 (68%), Positives = 60/70 (85%) Frame = +1 Query: 70 VVKPKYPLFILTSASLNSIYLDSAEYMNGDFTFIAKFSNPNRKMDVRFDYLDIELYFLDR 249 V+KP+ P+F + +A+L+SIY DS EY NGD TF+A FSNPN+K+DVRF+Y+DIELYF DR Sbjct: 24 VIKPRNPVFDIPNANLSSIYFDSPEYFNGDLTFLADFSNPNQKIDVRFEYVDIELYFSDR 83 Query: 250 LIATQALQPF 279 LI TQALQPF Sbjct: 84 LIGTQALQPF 93 >ref|XP_002519626.1| conserved hypothetical protein [Ricinus communis] gi|223541216|gb|EEF42771.1| conserved hypothetical protein [Ricinus communis] Length = 254 Score = 104 bits (259), Expect = 8e-21 Identities = 49/93 (52%), Positives = 62/93 (66%) Frame = +1 Query: 1 AFCCVIFSVXXXXXXXXXXXXXXVVKPKYPLFILTSASLNSIYLDSAEYMNGDFTFIAKF 180 A C+IFS+ +KP+ P+F +A+LN+IY DS EY NGD TF+A F Sbjct: 76 AVLCLIFSLTLIFFGIATLIIYLAIKPRSPVFDTPNANLNNIYFDSPEYFNGDLTFLANF 135 Query: 181 SNPNRKMDVRFDYLDIELYFLDRLIATQALQPF 279 SNPN+K+DVRF+Y+ IELYF DRLI Q LQPF Sbjct: 136 SNPNQKIDVRFEYVSIELYFFDRLIGIQTLQPF 168