BLASTX nr result

ID: Coptis21_contig00025256 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00025256
         (279 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330544.1| predicted protein [Populus trichocarpa] gi|2...   115   5e-24
ref|XP_002264234.1| PREDICTED: uncharacterized protein LOC100249...   109   2e-22
emb|CAN70940.1| hypothetical protein VITISV_001966 [Vitis vinifera]   109   2e-22
ref|XP_002300576.1| predicted protein [Populus trichocarpa] gi|2...   106   2e-21
ref|XP_002519626.1| conserved hypothetical protein [Ricinus comm...   104   8e-21

>ref|XP_002330544.1| predicted protein [Populus trichocarpa] gi|222872102|gb|EEF09233.1|
           predicted protein [Populus trichocarpa]
          Length = 197

 Score =  115 bits (287), Expect = 5e-24
 Identities = 54/93 (58%), Positives = 67/93 (72%)
 Frame = +1

Query: 1   AFCCVIFSVXXXXXXXXXXXXXXVVKPKYPLFILTSASLNSIYLDSAEYMNGDFTFIAKF 180
           A  C+IFS+              V+KP+ P+F + +A+LNS+Y DS EY NGD TF+A F
Sbjct: 20  AILCLIFSLVLIIFGIATLIIYLVIKPRNPVFDIPNANLNSVYFDSPEYFNGDLTFLANF 79

Query: 181 SNPNRKMDVRFDYLDIELYFLDRLIATQALQPF 279
           SNPNRK+DVRF+Y+DIELYF DRLI TQALQPF
Sbjct: 80  SNPNRKIDVRFEYVDIELYFSDRLIGTQALQPF 112


>ref|XP_002264234.1| PREDICTED: uncharacterized protein LOC100249744 [Vitis vinifera]
          Length = 217

 Score =  109 bits (273), Expect = 2e-22
 Identities = 52/93 (55%), Positives = 64/93 (68%)
 Frame = +1

Query: 1   AFCCVIFSVXXXXXXXXXXXXXXVVKPKYPLFILTSASLNSIYLDSAEYMNGDFTFIAKF 180
           A  C+IFS+              V+KPK PLF +   SL+S+Y DS EY NGDFTF+A F
Sbjct: 39  AILCLIFSLILIFFGIATLIIFLVIKPKTPLFDIPGVSLSSVYFDSPEYFNGDFTFLANF 98

Query: 181 SNPNRKMDVRFDYLDIELYFLDRLIATQALQPF 279
           SNPNRK++VRF+Y+ IELYF DRLI TQ L+PF
Sbjct: 99  SNPNRKINVRFEYVYIELYFFDRLIGTQTLEPF 131


>emb|CAN70940.1| hypothetical protein VITISV_001966 [Vitis vinifera]
          Length = 231

 Score =  109 bits (273), Expect = 2e-22
 Identities = 52/93 (55%), Positives = 64/93 (68%)
 Frame = +1

Query: 1   AFCCVIFSVXXXXXXXXXXXXXXVVKPKYPLFILTSASLNSIYLDSAEYMNGDFTFIAKF 180
           A  C+IFS+              V+KPK PLF +   SL+S+Y DS EY NGDFTF+A F
Sbjct: 53  AILCLIFSLLLIFFGIATLIIFLVIKPKTPLFDIPGVSLSSVYFDSPEYFNGDFTFLANF 112

Query: 181 SNPNRKMDVRFDYLDIELYFLDRLIATQALQPF 279
           SNPNRK++VRF+Y+ IELYF DRLI TQ L+PF
Sbjct: 113 SNPNRKINVRFEYVYIELYFFDRLIGTQTLEPF 145


>ref|XP_002300576.1| predicted protein [Populus trichocarpa] gi|222847834|gb|EEE85381.1|
           predicted protein [Populus trichocarpa]
          Length = 179

 Score =  106 bits (264), Expect = 2e-21
 Identities = 48/70 (68%), Positives = 60/70 (85%)
 Frame = +1

Query: 70  VVKPKYPLFILTSASLNSIYLDSAEYMNGDFTFIAKFSNPNRKMDVRFDYLDIELYFLDR 249
           V+KP+ P+F + +A+L+SIY DS EY NGD TF+A FSNPN+K+DVRF+Y+DIELYF DR
Sbjct: 24  VIKPRNPVFDIPNANLSSIYFDSPEYFNGDLTFLADFSNPNQKIDVRFEYVDIELYFSDR 83

Query: 250 LIATQALQPF 279
           LI TQALQPF
Sbjct: 84  LIGTQALQPF 93


>ref|XP_002519626.1| conserved hypothetical protein [Ricinus communis]
           gi|223541216|gb|EEF42771.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 254

 Score =  104 bits (259), Expect = 8e-21
 Identities = 49/93 (52%), Positives = 62/93 (66%)
 Frame = +1

Query: 1   AFCCVIFSVXXXXXXXXXXXXXXVVKPKYPLFILTSASLNSIYLDSAEYMNGDFTFIAKF 180
           A  C+IFS+               +KP+ P+F   +A+LN+IY DS EY NGD TF+A F
Sbjct: 76  AVLCLIFSLTLIFFGIATLIIYLAIKPRSPVFDTPNANLNNIYFDSPEYFNGDLTFLANF 135

Query: 181 SNPNRKMDVRFDYLDIELYFLDRLIATQALQPF 279
           SNPN+K+DVRF+Y+ IELYF DRLI  Q LQPF
Sbjct: 136 SNPNQKIDVRFEYVSIELYFFDRLIGIQTLQPF 168


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