BLASTX nr result

ID: Coptis21_contig00025237 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00025237
         (882 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270427.2| PREDICTED: uncharacterized protein LOC100259...   196   5e-48
emb|CBI26466.3| unnamed protein product [Vitis vinifera]              196   5e-48
ref|XP_002520086.1| conserved hypothetical protein [Ricinus comm...   178   2e-42
ref|XP_004151910.1| PREDICTED: growth-regulating factor 3-like [...   172   9e-41
ref|XP_003539001.1| PREDICTED: uncharacterized protein LOC100787...   157   3e-36

>ref|XP_002270427.2| PREDICTED: uncharacterized protein LOC100259737 [Vitis vinifera]
          Length = 330

 Score =  196 bits (499), Expect = 5e-48
 Identities = 107/201 (53%), Positives = 131/201 (65%), Gaps = 4/201 (1%)
 Frame = -3

Query: 802 YQNLPI---HNPQG-LCVGSNQSHLQMDPVSYGMASKEYRYLQGMKQDADERSFFSDASG 635
           +QNLP+   +NPQG    G+NQS   M+P+ YG+ +K+YRYL G+K +  E SFFS+ASG
Sbjct: 154 FQNLPLQNFNNPQGGPGSGTNQSQFHMEPIPYGIPNKDYRYLHGLKPEVGEHSFFSEASG 213

Query: 634 SARGLGMDSSLDSTSRLITSHVPSFPQSKSRNGSLMQTDYPQMHTTHQDFGNTGITVALS 455
           S RGL MDS LDST  L+ S V SFP SKS   S++Q+DYPQ                  
Sbjct: 214 SNRGLQMDSPLDSTWPLMPSRVSSFPPSKSSENSILQSDYPQ------------------ 255

Query: 454 KQTQQQHCFFGDEFSLAEPVKQEGQSLRPFFDEWPKTRDAWSDLDDDRSNRTSFSTTQLS 275
                 H FF  EF+  E VKQEGQSLRPFFDEWPKTRD+WS L+++RSN+TSFSTTQLS
Sbjct: 256 ------HSFFSSEFASGEVVKQEGQSLRPFFDEWPKTRDSWSGLEEERSNQTSFSTTQLS 309

Query: 274 ISIPMAXXXXXXXXXXSPNDD 212
           ISIPMA          SP+D+
Sbjct: 310 ISIPMASSDFSTTSSRSPHDN 330


>emb|CBI26466.3| unnamed protein product [Vitis vinifera]
          Length = 373

 Score =  196 bits (499), Expect = 5e-48
 Identities = 107/201 (53%), Positives = 131/201 (65%), Gaps = 4/201 (1%)
 Frame = -3

Query: 802 YQNLPI---HNPQG-LCVGSNQSHLQMDPVSYGMASKEYRYLQGMKQDADERSFFSDASG 635
           +QNLP+   +NPQG    G+NQS   M+P+ YG+ +K+YRYL G+K +  E SFFS+ASG
Sbjct: 197 FQNLPLQNFNNPQGGPGSGTNQSQFHMEPIPYGIPNKDYRYLHGLKPEVGEHSFFSEASG 256

Query: 634 SARGLGMDSSLDSTSRLITSHVPSFPQSKSRNGSLMQTDYPQMHTTHQDFGNTGITVALS 455
           S RGL MDS LDST  L+ S V SFP SKS   S++Q+DYPQ                  
Sbjct: 257 SNRGLQMDSPLDSTWPLMPSRVSSFPPSKSSENSILQSDYPQ------------------ 298

Query: 454 KQTQQQHCFFGDEFSLAEPVKQEGQSLRPFFDEWPKTRDAWSDLDDDRSNRTSFSTTQLS 275
                 H FF  EF+  E VKQEGQSLRPFFDEWPKTRD+WS L+++RSN+TSFSTTQLS
Sbjct: 299 ------HSFFSSEFASGEVVKQEGQSLRPFFDEWPKTRDSWSGLEEERSNQTSFSTTQLS 352

Query: 274 ISIPMAXXXXXXXXXXSPNDD 212
           ISIPMA          SP+D+
Sbjct: 353 ISIPMASSDFSTTSSRSPHDN 373


>ref|XP_002520086.1| conserved hypothetical protein [Ricinus communis]
           gi|223540850|gb|EEF42410.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 259

 Score =  178 bits (451), Expect = 2e-42
 Identities = 97/200 (48%), Positives = 122/200 (61%), Gaps = 3/200 (1%)
 Frame = -3

Query: 802 YQNLPIH---NPQGLCVGSNQSHLQMDPVSYGMASKEYRYLQGMKQDADERSFFSDASGS 632
           +Q+LP+H   N QG   G+NQSH  MD + YG+ SK+YRY+QG+K +  E SFFS+ASGS
Sbjct: 84  FQSLPLHAFGNLQGTGSGTNQSHYSMDSIPYGIPSKDYRYVQGLKSEVGEHSFFSEASGS 143

Query: 631 ARGLGMDSSLDSTSRLITSHVPSFPQSKSRNGSLMQTDYPQMHTTHQDFGNTGITVALSK 452
            RG+ MDS L++   L+ S V +F  SKS + S++Q  YP                    
Sbjct: 144 NRGVQMDSQLENAWPLMQSRVSTFNVSKSTDNSILQNGYP-------------------- 183

Query: 451 QTQQQHCFFGDEFSLAEPVKQEGQSLRPFFDEWPKTRDAWSDLDDDRSNRTSFSTTQLSI 272
               Q  +F  EF   E VKQ GQSLRPF DEWPKTRD+WS L+DDRSN TSFSTT+LSI
Sbjct: 184 ----QSSYFSGEFGTGESVKQGGQSLRPFLDEWPKTRDSWSGLEDDRSNPTSFSTTRLSI 239

Query: 271 SIPMAXXXXXXXXXXSPNDD 212
           S PMA          SP+D+
Sbjct: 240 STPMASSDLSTPSSRSPHDN 259


>ref|XP_004151910.1| PREDICTED: growth-regulating factor 3-like [Cucumis sativus]
           gi|449484096|ref|XP_004156783.1| PREDICTED:
           growth-regulating factor 3-like [Cucumis sativus]
          Length = 336

 Score =  172 bits (436), Expect = 9e-41
 Identities = 87/185 (47%), Positives = 120/185 (64%), Gaps = 3/185 (1%)
 Frame = -3

Query: 802 YQNLPIH---NPQGLCVGSNQSHLQMDPVSYGMASKEYRYLQGMKQDADERSFFSDASGS 632
           +  LP++   N Q    G++Q H  +D + YG+ SK+YRYLQG++ +A   SFFS+ASGS
Sbjct: 162 FHGLPLNALSNSQTTTTGTSQPHYPLDSIPYGIPSKDYRYLQGLRPEAGVHSFFSEASGS 221

Query: 631 ARGLGMDSSLDSTSRLITSHVPSFPQSKSRNGSLMQTDYPQMHTTHQDFGNTGITVALSK 452
           +R + MD+ +D+T  +++S  PSFP SKS   S+ Q+ Y Q                   
Sbjct: 222 SRAVQMDAPIDNTWPMMSSRSPSFPASKSTENSIFQSGYAQ------------------- 262

Query: 451 QTQQQHCFFGDEFSLAEPVKQEGQSLRPFFDEWPKTRDAWSDLDDDRSNRTSFSTTQLSI 272
                H FFG E++  E +KQEGQSL+P FDEWP+TR++W+ LDD+RSN+TSFSTTQLSI
Sbjct: 263 -----HSFFGGEYASGETLKQEGQSLQPLFDEWPRTRESWTGLDDERSNQTSFSTTQLSI 317

Query: 271 SIPMA 257
           SIPMA
Sbjct: 318 SIPMA 322


>ref|XP_003539001.1| PREDICTED: uncharacterized protein LOC100787567 [Glycine max]
          Length = 341

 Score =  157 bits (397), Expect = 3e-36
 Identities = 83/185 (44%), Positives = 117/185 (63%), Gaps = 3/185 (1%)
 Frame = -3

Query: 802 YQNLPIH---NPQGLCVGSNQSHLQMDPVSYGMASKEYRYLQGMKQDADERSFFSDASGS 632
           +QNL  +   N QG   G++ ++  +D + Y + SKEYRY+QG+K +  E  FFS+ASGS
Sbjct: 161 FQNLSTNTFGNLQGTDSGTDHTNYHLDSIPYAIPSKEYRYVQGLKSEGGEHCFFSEASGS 220

Query: 631 ARGLGMDSSLDSTSRLITSHVPSFPQSKSRNGSLMQTDYPQMHTTHQDFGNTGITVALSK 452
            + L M+S L++T  L+++ V SF  SKS N SL+ +DYP+                   
Sbjct: 221 NKVLQMESQLENTWPLMSTRVASFSTSKSSNDSLLHSDYPR------------------- 261

Query: 451 QTQQQHCFFGDEFSLAEPVKQEGQSLRPFFDEWPKTRDAWSDLDDDRSNRTSFSTTQLSI 272
                H F   E+   E VK+EGQ LRPFF+EWPK+R++WS L+D+RSN+T+FSTTQLSI
Sbjct: 262 -----HSFLSGEYVSGEHVKEEGQPLRPFFNEWPKSRESWSGLEDERSNQTAFSTTQLSI 316

Query: 271 SIPMA 257
           SIPM+
Sbjct: 317 SIPMS 321


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