BLASTX nr result

ID: Coptis21_contig00025188 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00025188
         (1523 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532277.1| conserved hypothetical protein [Ricinus comm...   128   5e-27
ref|XP_002316992.1| predicted protein [Populus trichocarpa] gi|2...   120   1e-24
ref|XP_002517454.1| conserved hypothetical protein [Ricinus comm...   111   4e-22
ref|XP_002534512.1| conserved hypothetical protein [Ricinus comm...   110   8e-22
ref|XP_002330354.1| predicted protein [Populus trichocarpa] gi|2...   107   1e-20

>ref|XP_002532277.1| conserved hypothetical protein [Ricinus communis]
            gi|223528011|gb|EEF30092.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 410

 Score =  128 bits (321), Expect = 5e-27
 Identities = 107/378 (28%), Positives = 178/378 (47%), Gaps = 36/378 (9%)
 Frame = -2

Query: 1519 LSSCKQVSKSWYNIIKHPGFIQLHLRN--SNNPPCLIVR---RTRKQNYRVHLLCNENVE 1355
            L + K+V + W ++++HP    +H     +NN PCL++      +   Y +H        
Sbjct: 43   LINVKRVCRFWRSLVQHPLLASMHFSRIANNNDPCLLLLCDLPIKSHLYSLHF------S 96

Query: 1354 AFNETTLIS-SAVQVKSLRKYVELYSCYGLIFSVP--KPVGNYFICNPITQDLISVPQPP 1184
            A +ET + + + + V  + K++ + SC GL++ +   +   NY I NP T D + +P+P 
Sbjct: 97   ALDETIIETVTRIPVPVIPKFLVIGSCNGLLYLLDSLQQRANY-IYNPFTSDYLELPEPG 155

Query: 1183 LIKRIKDDLFGFGFDQVSKVFKVIRIVTLQNRKSE---------FYPETVAQVYNLGTSE 1031
             +        GFGF   +K +KV+R+V  +N K E           P +  QV  +G   
Sbjct: 156  QVLNQHRVATGFGFHSTTKEYKVVRVVYYRNNKEEGTNFQKRRYSLPRSEVQVLTVGNGS 215

Query: 1030 --WGKSSKILFYLPSKIYNSESNKESNVFVNGALHWIGSSETSTSNAAQQIILFKLDTEE 857
              W    +  + L            S+V VNG LHW+     + S   +++I F L  E+
Sbjct: 216  LTWRSKGETSYQL--------LGNPSHVVVNGRLHWLSCRYRNQS--LRRLISFDLADEQ 265

Query: 856  FQQIPLPPGLGDKGIKRNLLVLGECL-GVVHVIHKEYIRIWVMKDYGIESSWSKEYFI-- 686
            F+++P P G        +L  L  CL GVV    + Y  IWVMK+YG++ SW KE+ I  
Sbjct: 266  FREVPCPVGASFGRHCSHLATLRGCLSGVVQGFRRLY--IWVMKEYGVKESWVKEFTIGV 323

Query: 685  ---RHI-PLHSVPVNYKDHYQPIH------MLKSGEMLLLCCNRYLGCYNFKTKLFRS-- 542
               R + P  +  +N ++ + P+       +L +GE+LL      L CY+ K+  F+   
Sbjct: 324  KLPRELEPYPNQSINLQEFHLPLSQTKVLCLLNNGEILLEFRCGTLVCYDTKSGAFKELI 383

Query: 541  --TDIGFVSRLLPHLGSL 494
               D+   S  + H+GSL
Sbjct: 384  IFQDLPEWSNAIVHVGSL 401


>ref|XP_002316992.1| predicted protein [Populus trichocarpa] gi|222860057|gb|EEE97604.1|
            predicted protein [Populus trichocarpa]
          Length = 411

 Score =  120 bits (300), Expect = 1e-24
 Identities = 103/375 (27%), Positives = 175/375 (46%), Gaps = 33/375 (8%)
 Frame = -2

Query: 1519 LSSCKQVSKSWYNIIKHPGFIQLHLRNSNNPPCLIVRRT---RKQNYRVHLLCNENVEAF 1349
            L +CK V K+W +++  P F++LHL  S  P  L++++T   RK++    +L  E VE  
Sbjct: 56   LLNCKSVCKTWLHLMSDPSFVRLHLERS--PTTLLIQKTPFERKES--TEMLLVEIVEED 111

Query: 1348 NETTLISSAVQVKSLRKYVE-----LYSCYGLIF----SVPKPVGNYFICNPITQDLISV 1196
                     +++   + + +     L SC GL+     S  K      +CNP+  + I +
Sbjct: 112  ISKPFYIEIIRLFPTKNFPDTDVRILNSCNGLLCLYEDSGDKSDMMVHVCNPVLGEYIDI 171

Query: 1195 PQPPLIKRIKDDLFGFGFDQVSKVFKVIRIVTLQNRKSEFYPET-------VAQVYNLGT 1037
            P     K+ +  L  FGF  VS  +KV++          FYPE        +A++Y +GT
Sbjct: 172  PVVNTDKKFEHHL-AFGFSSVSNQYKVLQT---------FYPEKDLTAAPCLAEIYTVGT 221

Query: 1036 SEWGKSSKILFYLPSKIYNSESNKESNVFVNGALHWIGSSETSTSNAAQQIILFKLDTEE 857
             +W       F L S         ++N F++ ++HWI       SN+   +  F   +E+
Sbjct: 222  GQWRSIGNASFRLQSL--------DANAFLHDSIHWI----EYRSNSIGFVSAFDFVSEQ 269

Query: 856  FQQIPLPP------GLGDKGIKRNLLVLGECLGVVH--VIHKEYIRIWVMKDYGIESSWS 701
            F+ + LPP      G+G +    ++ V+  CL + +   I  E   IWVM++YGI+ SW+
Sbjct: 270  FKLVALPPASQIHDGMG-RCYPSSVGVIKGCLFMTNGVCIENEKFEIWVMEEYGIKESWT 328

Query: 700  KEYFIRHIPLHSVPVNYKDHYQPIHMLKSGEMLLLCCNRYLGCYNFK------TKLFRST 539
            K++      L ++ V +   YQP++ L SGE+L+   +  +G Y  K       K ++  
Sbjct: 329  KKFV-----LSNLEVQHYVSYQPLYFLSSGEILICEDDESIGVYVPKLERIHEAKFYKGK 383

Query: 538  DIGFVSRLLPHLGSL 494
            D   V+   P   SL
Sbjct: 384  DCFLVTAHNPSFVSL 398


>ref|XP_002517454.1| conserved hypothetical protein [Ricinus communis]
            gi|223543465|gb|EEF44996.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 401

 Score =  111 bits (278), Expect = 4e-22
 Identities = 109/377 (28%), Positives = 172/377 (45%), Gaps = 29/377 (7%)
 Frame = -2

Query: 1522 SLSSCKQVSKSWYNIIKHPGFIQLHLRNSNNPPCLIVRRTRKQNYRVHLLCNENVEAFNE 1343
            SL  CK VS+ WY  +++P    +HL  +      ++  +     ++ L+  E+ E    
Sbjct: 38   SLLECKPVSRHWYTSVRNPLLANMHLNRAAEQNLCLLFFSDWPRSKLELVQVEHPEPRKL 97

Query: 1342 TTLISSAVQVKSLRKYVELYSCYGLI----FSVPKPVGNYFICNPITQDLISVPQPP--- 1184
             TL +    V  L ++  + SC GLI    +    P+   +I NP T +   +P+     
Sbjct: 98   KTLKTPFESV--LSEFEVVGSCNGLICLYDYFSDDPL---YIYNPFTIECRELPRVEASP 152

Query: 1183 --LIKRIKDDLFGFGFDQVSKVFKVIRIVTLQNRKSEFY---PETVAQVYNLGTSEWGKS 1019
              +I R+   +FGFGF    + +KVI+IV  +   ++F    PE  A V    T  W   
Sbjct: 153  HSVICRV---VFGFGFHPKMEEYKVIKIVYYKQGNNDFSGGAPE--AFVLTANTPTWRNI 207

Query: 1018 SKILFYLPSKIYNSESNKESNVFVNGALHWIGSSETSTSNAAQQIILFKLDTEEFQQIPL 839
             KI + L        +   S   VN  LHW+           ++I+ F L+TE+FQ +P 
Sbjct: 208  GKIGYDL--------NGPTSEALVNEKLHWLTFCLVHEEVKYREIVSFDLETEQFQDVPR 259

Query: 838  PPGLGDKGIKRNLLVLGECLGVVHVIHKEYIRIWVMKDYGIESSWSKEYFIRH-----IP 674
            P   G   I  +L+ L  CL  +   ++    IW+MK Y +++SW KE  +R+     + 
Sbjct: 260  PGCGGLDQINYHLVTLRGCLSAIVSCNEGSNEIWMMKIYNVKASWRKEMIVRNYVPQGLR 319

Query: 673  LHSVPV--NYKDHYQPIHM-----LKSGEMLLLCCNRYLGCYN-----FKTKLFRSTDIG 530
            L++VP     K+ YQ         LK+GE+LLL   R +  YN     FK   F+   + 
Sbjct: 320  LNTVPPARRRKNGYQGRRFRVLCDLKNGELLLLYGCRCIVSYNPETGEFKELNFQGLPLE 379

Query: 529  FVSRLLPHLGSLISPTT 479
            F++    H GSLIS  T
Sbjct: 380  FLA--FVHSGSLISVNT 394


>ref|XP_002534512.1| conserved hypothetical protein [Ricinus communis]
            gi|223525141|gb|EEF27869.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 383

 Score =  110 bits (276), Expect = 8e-22
 Identities = 96/354 (27%), Positives = 161/354 (45%), Gaps = 24/354 (6%)
 Frame = -2

Query: 1522 SLSSCKQVSKSWYNIIKHPGFIQLHLRNS-NNPPCLIVRRTRKQNYRVHLLCNENVEAFN 1346
            SL   K V +SW N+ + P  + LH  +   N PCLI+        +++ LC        
Sbjct: 30   SLFIIKFVCQSWRNLAQDPLLVDLHFSHKIENNPCLILHSDHPTKNQLYALCLYPHNTSQ 89

Query: 1345 ETTLISSAVQVKSLRKYVELYSCYG---LIFSVPKPVGNYFICNPITQDLISVPQPPLIK 1175
            +  ++   V VK   ++  + SC G   L  S+ K    +++ NP T   + +P    I 
Sbjct: 90   DGMVMKIPVPVKL--EFDVVGSCKGWLCLYDSLHK--NTFYMYNPFTNSCMELP----IS 141

Query: 1174 RIKDDLF---GFGFDQVSKVFKVIRIVTLQ---NRKSEFYPETV---AQVYNLGTSEWGK 1022
                D++   GFGFD V K +KV+++  ++   N   E Y  ++    Q+  +G+  W  
Sbjct: 142  NFPSDVWTVLGFGFDPVRKKYKVLKVSYIRRTNNTAGERYGLSLRSEVQILTVGSPSWRS 201

Query: 1021 SSKILFYLPSKIYNSESNKESNVFVNGALHWIGSSETSTSNAAQQIILFKLDTEEFQQIP 842
              +  +Y          +  S V+VNG LHW+  +        +++I F L+ E+F+++P
Sbjct: 202  LGETPYY--------PIHSPSQVYVNGRLHWV--NWPVRYRPGRKLISFDLEDEKFREVP 251

Query: 841  LPPGLGDKGIKRNLLVLGECLGVVHVIHKEYIRIWVMKDYGIESSWSKEYFI-------- 686
            LP   G K     L+V+ +CL      +     +WVMKDYG++ SW KE+ I        
Sbjct: 252  LPGSDGIKWGDYMLVVIRDCLSAAVYRNYGSFEVWVMKDYGLKESWIKEFSIGVYLPKGL 311

Query: 685  --RHIPLHSVPVNYKDHYQPI-HMLKSGEMLLLCCNRYLGCYNFKTKLFRSTDI 533
              +  P   V   Y+  +  I  +LK+GE+LL    R L  Y  +   F+   +
Sbjct: 312  EQKIDPSFRVSKFYRRAFTRILCVLKNGEILLEYGRRALVSYEARFGTFKDITV 365


>ref|XP_002330354.1| predicted protein [Populus trichocarpa] gi|222871558|gb|EEF08689.1|
            predicted protein [Populus trichocarpa]
          Length = 452

 Score =  107 bits (266), Expect = 1e-20
 Identities = 89/343 (25%), Positives = 155/343 (45%), Gaps = 17/343 (4%)
 Frame = -2

Query: 1522 SLSSCKQVSKSWYNIIKHPGFIQLHLRNS----------NNPPCLIVRRTRKQNYRVHLL 1373
            ++ +C+ V K+W + I    F +LHL  S          NNP    V+  +     V L 
Sbjct: 44   TILNCRCVCKTWLHYISDSFFAKLHLERSPTSLLVKTISNNPESRSVQLVQITGKPVGL- 102

Query: 1372 CNENVEAFNETTLISSAVQVKSLRKYVELYSCYGLI-FSVPKPVGNY---FICNPITQDL 1205
                     E   +   + +     ++   SC GL+  S     G++   ++CNPI  + 
Sbjct: 103  ---RFRVVEEMKFVQE-INLPYNNDFLIENSCNGLLCISKTFQDGSHDDIYLCNPILGEY 158

Query: 1204 ISVPQPPLIKRIKDDLFGFGFDQVSKVFKVIRIVTLQNRKS-EFYPETVAQVYNLGTSEW 1028
            IS+P            F  G+  ++K +KV+   T  ++K  +  PE  A++Y +GT +W
Sbjct: 159  ISIPLAAGQGTRHKRSFSLGYSAITKEYKVLH--TFYSKKGPDSQPE--AEIYTIGTGKW 214

Query: 1027 GKSSKILFYLPSKIYNSESNKESNVFVNGALHWIGSSETSTSNAAQQIILFKLDTEEFQQ 848
                K L  L   +++S        FV G++HW    E    N    I  F  + E+F Q
Sbjct: 215  RSIHKALHILDIFMFDS--------FVCGSIHWELRGE---DNCVNSIGSFNFENEQFSQ 263

Query: 847  IPLPPGLGDKGIKRNLLVLGECLGV--VHVIHKEYIRIWVMKDYGIESSWSKEYFIRHIP 674
            + LPP   + G+   L V   CLGV   +   +    IWVMK+YG + SW+K++ ++++ 
Sbjct: 264  LSLPPRYDEGGV--TLTVFEGCLGVSFFNTCCETQFEIWVMKEYGNKQSWTKQFTVKNL- 320

Query: 673  LHSVPVNYKDHYQPIHMLKSGEMLLLCCNRYLGCYNFKTKLFR 545
                   +++HYQP+  L +G +L++  +     Y+ + K  +
Sbjct: 321  ------GFENHYQPLIFLNNGLILMMDNHERFVIYDTRRKFMK 357


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