BLASTX nr result

ID: Coptis21_contig00025184 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00025184
         (304 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004163792.1| PREDICTED: dehydrogenase/reductase SDR famil...    69   3e-10
ref|XP_004139691.1| PREDICTED: dehydrogenase/reductase SDR famil...    69   3e-10
gb|AFK48616.1| unknown [Lotus japonicus]                               67   2e-09
gb|AFK39878.1| unknown [Lotus japonicus]                               67   2e-09
ref|XP_002872460.1| short-chain dehydrogenase/reductase family p...    66   3e-09

>ref|XP_004163792.1| PREDICTED: dehydrogenase/reductase SDR family member 12-like
           [Cucumis sativus]
          Length = 340

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 33/47 (70%), Positives = 39/47 (82%)
 Frame = +2

Query: 164 LQVGVSIFAIGVLIMFIQKAWRSTAFGIYGYLNFTKSGFIEHSKKFK 304
           LQ+ + I +IG L MF+ KAWR +AFG+YGYLNFTKS FIEHSKKFK
Sbjct: 6   LQLRIHI-SIGTLAMFLLKAWRVSAFGVYGYLNFTKSAFIEHSKKFK 51


>ref|XP_004139691.1| PREDICTED: dehydrogenase/reductase SDR family member 12-like
           [Cucumis sativus]
          Length = 340

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 33/47 (70%), Positives = 39/47 (82%)
 Frame = +2

Query: 164 LQVGVSIFAIGVLIMFIQKAWRSTAFGIYGYLNFTKSGFIEHSKKFK 304
           LQ+ + I +IG L MF+ KAWR +AFG+YGYLNFTKS FIEHSKKFK
Sbjct: 6   LQLRIHI-SIGTLAMFLLKAWRVSAFGVYGYLNFTKSAFIEHSKKFK 51


>gb|AFK48616.1| unknown [Lotus japonicus]
          Length = 342

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 28/39 (71%), Positives = 32/39 (82%)
 Frame = +2

Query: 188 AIGVLIMFIQKAWRSTAFGIYGYLNFTKSGFIEHSKKFK 304
           +I  L MF+ K WR TAFG+YGYLNFTK GF+EHSKKFK
Sbjct: 15  SIATLAMFLLKTWRQTAFGVYGYLNFTKPGFLEHSKKFK 53


>gb|AFK39878.1| unknown [Lotus japonicus]
          Length = 342

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 28/39 (71%), Positives = 32/39 (82%)
 Frame = +2

Query: 188 AIGVLIMFIQKAWRSTAFGIYGYLNFTKSGFIEHSKKFK 304
           +I  L MF+ K WR TAFG+YGYLNFTK GF+EHSKKFK
Sbjct: 15  SIATLAMFLLKTWRQTAFGVYGYLNFTKPGFLEHSKKFK 53


>ref|XP_002872460.1| short-chain dehydrogenase/reductase family protein [Arabidopsis
           lyrata subsp. lyrata] gi|297318297|gb|EFH48719.1|
           short-chain dehydrogenase/reductase family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 322

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 27/33 (81%), Positives = 31/33 (93%)
 Frame = +2

Query: 206 MFIQKAWRSTAFGIYGYLNFTKSGFIEHSKKFK 304
           MF+ K WRSTAFG+YGY+NFTK+GFIEHSKKFK
Sbjct: 1   MFLLKTWRSTAFGVYGYMNFTKNGFIEHSKKFK 33


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