BLASTX nr result

ID: Coptis21_contig00025134 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00025134
         (547 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274426.1| PREDICTED: WD repeat domain-containing prote...   305   2e-81
emb|CAN65101.1| hypothetical protein VITISV_039726 [Vitis vinifera]   305   2e-81
ref|XP_003630176.1| Mitogen-activated protein kinase organizer [...   301   6e-80
ref|XP_004141980.1| PREDICTED: WD repeat domain-containing prote...   298   3e-79
ref|XP_002298725.1| predicted protein [Populus trichocarpa] gi|2...   298   3e-79

>ref|XP_002274426.1| PREDICTED: WD repeat domain-containing protein 83 [Vitis vinifera]
           gi|297743030|emb|CBI35897.3| unnamed protein product
           [Vitis vinifera]
          Length = 299

 Score =  305 bits (782), Expect = 2e-81
 Identities = 142/163 (87%), Positives = 156/163 (95%)
 Frame = +1

Query: 1   TEPIQIIDTFLDSVMSICLTKHEILAGCVDGTVRTFDIRIGREISDDLGQPVNCISLSND 180
           TEPIQIIDTF DSVMS+CLTK EI+AG VDGTVRTFDIRIGRE+SDDLGQPVNCIS+SND
Sbjct: 136 TEPIQIIDTFSDSVMSVCLTKSEIIAGSVDGTVRTFDIRIGRELSDDLGQPVNCISMSND 195

Query: 181 GNCVLASCLDSTMRLLDRTTGELLQEYKGHTCKSFKMDCCLTNDDAHITGGSEDGFIYFW 360
            NC+LASCLDST+RLLDR+TGELLQEYKGHTCKS+KMDCCLTN DAH+T GSEDGFI+FW
Sbjct: 196 ANCILASCLDSTLRLLDRSTGELLQEYKGHTCKSYKMDCCLTNTDAHVTSGSEDGFIFFW 255

Query: 361 DLVDASVVSSFRAHSSVVTSVSYHPKDNCMVTSSVDSTIRVWK 489
           DLVDASVVSSFRAH+SVVTSVSYHPKD+CM+T+SVD TIRVWK
Sbjct: 256 DLVDASVVSSFRAHASVVTSVSYHPKDDCMITASVDGTIRVWK 298


>emb|CAN65101.1| hypothetical protein VITISV_039726 [Vitis vinifera]
          Length = 264

 Score =  305 bits (782), Expect = 2e-81
 Identities = 142/163 (87%), Positives = 156/163 (95%)
 Frame = +1

Query: 1   TEPIQIIDTFLDSVMSICLTKHEILAGCVDGTVRTFDIRIGREISDDLGQPVNCISLSND 180
           TEPIQIIDTF DSVMS+CLTK EI+AG VDGTVRTFDIRIGRE+SDDLGQPVNCIS+SND
Sbjct: 101 TEPIQIIDTFSDSVMSVCLTKSEIIAGSVDGTVRTFDIRIGRELSDDLGQPVNCISMSND 160

Query: 181 GNCVLASCLDSTMRLLDRTTGELLQEYKGHTCKSFKMDCCLTNDDAHITGGSEDGFIYFW 360
            NC+LASCLDST+RLLDR+TGELLQEYKGHTCKS+KMDCCLTN DAH+T GSEDGFI+FW
Sbjct: 161 ANCILASCLDSTLRLLDRSTGELLQEYKGHTCKSYKMDCCLTNTDAHVTSGSEDGFIFFW 220

Query: 361 DLVDASVVSSFRAHSSVVTSVSYHPKDNCMVTSSVDSTIRVWK 489
           DLVDASVVSSFRAH+SVVTSVSYHPKD+CM+T+SVD TIRVWK
Sbjct: 221 DLVDASVVSSFRAHASVVTSVSYHPKDDCMITASVDGTIRVWK 263


>ref|XP_003630176.1| Mitogen-activated protein kinase organizer [Medicago truncatula]
           gi|355524198|gb|AET04652.1| Mitogen-activated protein
           kinase organizer [Medicago truncatula]
          Length = 306

 Score =  301 bits (770), Expect = 6e-80
 Identities = 140/163 (85%), Positives = 153/163 (93%)
 Frame = +1

Query: 1   TEPIQIIDTFLDSVMSICLTKHEILAGCVDGTVRTFDIRIGREISDDLGQPVNCISLSND 180
           TEPIQIIDTF DSVMS+CLTK EI+ G VDGTVRTFD+RIGREISD LGQPVNCIS+SND
Sbjct: 143 TEPIQIIDTFADSVMSVCLTKTEIIGGSVDGTVRTFDMRIGREISDSLGQPVNCISMSND 202

Query: 181 GNCVLASCLDSTMRLLDRTTGELLQEYKGHTCKSFKMDCCLTNDDAHITGGSEDGFIYFW 360
           GNC+LA CLDST+RLLDRTTGELLQEYKGHT KS+K+DCCLTN DAH+TGGSEDGF+YFW
Sbjct: 203 GNCILAGCLDSTVRLLDRTTGELLQEYKGHTNKSYKLDCCLTNTDAHVTGGSEDGFVYFW 262

Query: 361 DLVDASVVSSFRAHSSVVTSVSYHPKDNCMVTSSVDSTIRVWK 489
           DLVDASVVS FRAH+SVVTSVSYHPK+NCM+TSSVD TIRVWK
Sbjct: 263 DLVDASVVSKFRAHTSVVTSVSYHPKENCMITSSVDGTIRVWK 305



 Score = 58.5 bits (140), Expect = 6e-07
 Identities = 29/105 (27%), Positives = 54/105 (51%)
 Frame = +1

Query: 172 SNDGNCVLASCLDSTMRLLDRTTGELLQEYKGHTCKSFKMDCCLTNDDAHITGGSEDGFI 351
           ++DGN +L+   D T+RL +   G  ++ YK H  +    D  +T D++ +     D  +
Sbjct: 34  NSDGNYILSCGKDRTIRLWNPHRGIHIKTYKSHGREV--RDVHVTTDNSKLCSCGGDRQV 91

Query: 352 YFWDLVDASVVSSFRAHSSVVTSVSYHPKDNCMVTSSVDSTIRVW 486
           Y+WD+    V+  FR H   V  V ++   + +V++  D ++R W
Sbjct: 92  YYWDVATGRVIRKFRGHDGEVNGVKFNEYSSVVVSAGYDQSLRAW 136


>ref|XP_004141980.1| PREDICTED: WD repeat domain-containing protein 83-like [Cucumis
           sativus]
          Length = 299

 Score =  298 bits (764), Expect = 3e-79
 Identities = 138/163 (84%), Positives = 153/163 (93%)
 Frame = +1

Query: 1   TEPIQIIDTFLDSVMSICLTKHEILAGCVDGTVRTFDIRIGREISDDLGQPVNCISLSND 180
           TEPIQIIDTF DSVMS+CLTK EI+ G VDGTVRTFD+RIGREISD+LGQ VNCIS+SND
Sbjct: 136 TEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFDMRIGREISDNLGQTVNCISMSND 195

Query: 181 GNCVLASCLDSTMRLLDRTTGELLQEYKGHTCKSFKMDCCLTNDDAHITGGSEDGFIYFW 360
            NC+LASCLDST+RLLDR++GELLQEYKGHTCKS+K+DCCLTN DAH+TGGSEDGF+YFW
Sbjct: 196 ANCILASCLDSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNTDAHVTGGSEDGFVYFW 255

Query: 361 DLVDASVVSSFRAHSSVVTSVSYHPKDNCMVTSSVDSTIRVWK 489
           DLVDASVVS FRAHSSVVTSVSYHPKD CM+T+SVD TIRVWK
Sbjct: 256 DLVDASVVSKFRAHSSVVTSVSYHPKDKCMITASVDGTIRVWK 298


>ref|XP_002298725.1| predicted protein [Populus trichocarpa] gi|222845983|gb|EEE83530.1|
           predicted protein [Populus trichocarpa]
          Length = 300

 Score =  298 bits (764), Expect = 3e-79
 Identities = 139/163 (85%), Positives = 153/163 (93%)
 Frame = +1

Query: 1   TEPIQIIDTFLDSVMSICLTKHEILAGCVDGTVRTFDIRIGREISDDLGQPVNCISLSND 180
           TEPIQIIDTF DSVMS+CLTK EI+AG VDGTVRTFDIRIGREISD+LG PVNCIS+SND
Sbjct: 137 TEPIQIIDTFSDSVMSVCLTKTEIIAGSVDGTVRTFDIRIGREISDNLGHPVNCISMSND 196

Query: 181 GNCVLASCLDSTMRLLDRTTGELLQEYKGHTCKSFKMDCCLTNDDAHITGGSEDGFIYFW 360
           GNC+LASCLDST+RLLDRTTGELLQEYKGH CKS+K+DCCLTN DAH+ GGSEDG+IYFW
Sbjct: 197 GNCILASCLDSTLRLLDRTTGELLQEYKGHICKSYKLDCCLTNTDAHVAGGSEDGYIYFW 256

Query: 361 DLVDASVVSSFRAHSSVVTSVSYHPKDNCMVTSSVDSTIRVWK 489
           DLVDASV+S FRAHSSVVTSVSYHP DNCMV++SVD TI+VWK
Sbjct: 257 DLVDASVLSRFRAHSSVVTSVSYHPTDNCMVSASVDGTIKVWK 299



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 29/105 (27%), Positives = 54/105 (51%)
 Frame = +1

Query: 172 SNDGNCVLASCLDSTMRLLDRTTGELLQEYKGHTCKSFKMDCCLTNDDAHITGGSEDGFI 351
           + DGN  L+   D T+RL +   G  ++ YK H  +    D  +T D++ +     D  +
Sbjct: 28  NGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREV--RDVHVTQDNSKLVSCGGDRQV 85

Query: 352 YFWDLVDASVVSSFRAHSSVVTSVSYHPKDNCMVTSSVDSTIRVW 486
           ++WD+    V+  FR H S V +V ++   + +V++  D ++R W
Sbjct: 86  FYWDVATGRVIRKFRGHGSEVNAVKFNEYASVVVSAGYDQSLRAW 130


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