BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00025126
         (527 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634254.1| PREDICTED: pentatricopeptide repeat-containi...   137   1e-30
emb|CBI15095.3| unnamed protein product [Vitis vinifera]              137   1e-30
ref|XP_003540784.1| PREDICTED: pentatricopeptide repeat-containi...   130   2e-28
ref|XP_002511467.1| pentatricopeptide repeat-containing protein,...   129   3e-28
ref|XP_002321560.1| predicted protein [Populus trichocarpa] gi|2...   125   4e-27

>ref|XP_003634254.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
           mitochondrial-like [Vitis vinifera]
          Length = 450

 Score =  137 bits (344), Expect = 1e-30
 Identities = 65/101 (64%), Positives = 81/101 (80%)
 Frame = -2

Query: 304 IINLILKTQNHKTLTQTLDTLNPEWSPPLVNHILKHLWNDGPKALHFFKHLDTHHPTYTH 125
           I+NL+LKT + +TLT+TL+    EW+P LV+ +LK LWN GPKAL FFK LD +HPTY H
Sbjct: 42  IVNLVLKTDS-QTLTRTLEKYPVEWTPNLVDRVLKLLWNHGPKALQFFKSLD-YHPTYAH 99

Query: 124 CPTSYDHAIDLSGRLRDYKTLWCLVSRMRSLRIGPTPKTFA 2
             +S+DHAID++GRLRDYKTLW LV RMR+ R+GP PKTFA
Sbjct: 100 VSSSFDHAIDIAGRLRDYKTLWTLVDRMRTRRLGPNPKTFA 140


>emb|CBI15095.3| unnamed protein product [Vitis vinifera]
          Length = 815

 Score =  137 bits (344), Expect = 1e-30
 Identities = 65/101 (64%), Positives = 81/101 (80%)
 Frame = -2

Query: 304 IINLILKTQNHKTLTQTLDTLNPEWSPPLVNHILKHLWNDGPKALHFFKHLDTHHPTYTH 125
           I+NL+LKT + +TLT+TL+    EW+P LV+ +LK LWN GPKAL FFK LD +HPTY H
Sbjct: 42  IVNLVLKTDS-QTLTRTLEKYPVEWTPNLVDRVLKLLWNHGPKALQFFKSLD-YHPTYAH 99

Query: 124 CPTSYDHAIDLSGRLRDYKTLWCLVSRMRSLRIGPTPKTFA 2
             +S+DHAID++GRLRDYKTLW LV RMR+ R+GP PKTFA
Sbjct: 100 VSSSFDHAIDIAGRLRDYKTLWTLVDRMRTRRLGPNPKTFA 140


>ref|XP_003540784.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
           mitochondrial-like [Glycine max]
          Length = 495

 Score =  130 bits (326), Expect = 2e-28
 Identities = 55/101 (54%), Positives = 78/101 (77%)
 Frame = -2

Query: 304 IINLILKTQNHKTLTQTLDTLNPEWSPPLVNHILKHLWNDGPKALHFFKHLDTHHPTYTH 125
           I  L+L++ + +T+++ L     +W+P LVN ++K LWN GPKAL FFKHLD HHP+YTH
Sbjct: 44  IAKLVLES-DPRTVSEALTKPTIQWTPDLVNKVMKRLWNHGPKALQFFKHLDRHHPSYTH 102

Query: 124 CPTSYDHAIDLSGRLRDYKTLWCLVSRMRSLRIGPTPKTFA 2
            P+S+DHA+D++ R+RD+ + W LV RMRSLR+GP+PKT A
Sbjct: 103 SPSSFDHAVDIAARMRDFNSAWALVGRMRSLRLGPSPKTLA 143


>ref|XP_002511467.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223550582|gb|EEF52069.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 482

 Score =  129 bits (324), Expect = 3e-28
 Identities = 60/98 (61%), Positives = 78/98 (79%)
 Frame = -2

Query: 295 LILKTQNHKTLTQTLDTLNPEWSPPLVNHILKHLWNDGPKALHFFKHLDTHHPTYTHCPT 116
           LIL + N +TL ++L + + +W+P LVN ILK LWN GPKALHFFK L +HHP+Y H  +
Sbjct: 35  LILNSTNSQTLAESLHSPSIQWTPQLVNTILKRLWNHGPKALHFFKIL-SHHPSYCHQAS 93

Query: 115 SYDHAIDLSGRLRDYKTLWCLVSRMRSLRIGPTPKTFA 2
           S+DHAID+  RLRD++TLW LVSRMRS R+GP+P+TFA
Sbjct: 94  SFDHAIDICARLRDFRTLWFLVSRMRSCRLGPSPRTFA 131


>ref|XP_002321560.1| predicted protein [Populus trichocarpa] gi|222868556|gb|EEF05687.1|
           predicted protein [Populus trichocarpa]
          Length = 491

 Score =  125 bits (314), Expect = 4e-27
 Identities = 62/101 (61%), Positives = 75/101 (74%)
 Frame = -2

Query: 304 IINLILKTQNHKTLTQTLDTLNPEWSPPLVNHILKHLWNDGPKALHFFKHLDTHHPTYTH 125
           +  LIL + N + L QTL +   +W+P LVN ILK LWNDGPKAL FF  L +HHP+Y+H
Sbjct: 41  LATLILTSSNPQALAQTLHSPTIQWTPQLVNTILKRLWNDGPKALQFFNLL-SHHPSYSH 99

Query: 124 CPTSYDHAIDLSGRLRDYKTLWCLVSRMRSLRIGPTPKTFA 2
            P+SYDHAID+S RLRD  +L  LV RMRS R+GPTPKTFA
Sbjct: 100 HPSSYDHAIDISARLRDSPSLRSLVYRMRSARLGPTPKTFA 140