BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00025105
         (492 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15973.3| unnamed protein product [Vitis vinifera]              253   1e-65
ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containi...   253   1e-65
ref|XP_002314110.1| predicted protein [Populus trichocarpa] gi|2...   233   1e-59
ref|XP_004145320.1| PREDICTED: pentatricopeptide repeat-containi...   227   7e-58
ref|XP_002879234.1| predicted protein [Arabidopsis lyrata subsp....   219   2e-55

>emb|CBI15973.3| unnamed protein product [Vitis vinifera]
          Length = 652

 Score =  253 bits (646), Expect = 1e-65
 Identities = 119/149 (79%), Positives = 133/149 (89%)
 Frame = -3

Query: 484 LRKRMRDFGIKKEPGCSSIEVDGSVHEFLVGDNSHPLCKKVYLKLDEILLNLKSVGYIAD 305
           LRK MRD G+KKEPGCSSIEVDG VHEFLVGDNSHP  KK+Y KLDEI+  L+++GY+ +
Sbjct: 504 LRKLMRDVGLKKEPGCSSIEVDGIVHEFLVGDNSHPSAKKIYAKLDEIVARLETIGYVPN 563

Query: 304 KSHLLQDVEEEDVKDQALYLHSEKLAIAYGLISTRSPVPIRIVKNLRVCGDCHSVAKLIS 125
           KSHLLQ VEEEDVK+QAL+LHSEKLAIA+GLIST    PIRIVKNLRVCGDCHSVAKL+S
Sbjct: 564 KSHLLQLVEEEDVKEQALFLHSEKLAIAFGLISTGQSQPIRIVKNLRVCGDCHSVAKLVS 623

Query: 124 KFYDREILLRDRYRFHHFKVGNCSCMDYW 38
           K YDREILLRDRYRFHHF+ G+CSCMDYW
Sbjct: 624 KLYDREILLRDRYRFHHFREGHCSCMDYW 652


>ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
            chloroplastic-like [Vitis vinifera]
          Length = 743

 Score =  253 bits (646), Expect = 1e-65
 Identities = 119/149 (79%), Positives = 133/149 (89%)
 Frame = -3

Query: 484  LRKRMRDFGIKKEPGCSSIEVDGSVHEFLVGDNSHPLCKKVYLKLDEILLNLKSVGYIAD 305
            LRK MRD G+KKEPGCSSIEVDG VHEFLVGDNSHP  KK+Y KLDEI+  L+++GY+ +
Sbjct: 595  LRKLMRDVGLKKEPGCSSIEVDGIVHEFLVGDNSHPSAKKIYAKLDEIVARLETIGYVPN 654

Query: 304  KSHLLQDVEEEDVKDQALYLHSEKLAIAYGLISTRSPVPIRIVKNLRVCGDCHSVAKLIS 125
            KSHLLQ VEEEDVK+QAL+LHSEKLAIA+GLIST    PIRIVKNLRVCGDCHSVAKL+S
Sbjct: 655  KSHLLQLVEEEDVKEQALFLHSEKLAIAFGLISTGQSQPIRIVKNLRVCGDCHSVAKLVS 714

Query: 124  KFYDREILLRDRYRFHHFKVGNCSCMDYW 38
            K YDREILLRDRYRFHHF+ G+CSCMDYW
Sbjct: 715  KLYDREILLRDRYRFHHFREGHCSCMDYW 743


>ref|XP_002314110.1| predicted protein [Populus trichocarpa] gi|222850518|gb|EEE88065.1|
            predicted protein [Populus trichocarpa]
          Length = 738

 Score =  233 bits (594), Expect = 1e-59
 Identities = 110/151 (72%), Positives = 128/151 (84%)
 Frame = -3

Query: 490  TRLRKRMRDFGIKKEPGCSSIEVDGSVHEFLVGDNSHPLCKKVYLKLDEILLNLKSVGYI 311
            +RLR+ M+  G++KEPGCSSIEV+G +HEFLVGDNSHPL  ++Y KLDEI+  +KS GY+
Sbjct: 588  SRLRQHMKVSGLEKEPGCSSIEVNGIIHEFLVGDNSHPLSTEIYSKLDEIVARIKSTGYV 647

Query: 310  ADKSHLLQDVEEEDVKDQALYLHSEKLAIAYGLISTRSPVPIRIVKNLRVCGDCHSVAKL 131
            +D+SHLLQ VEEE +K+ AL LHSEKLAIAYGLI      PIRIVKNLRVCGDCHSVAKL
Sbjct: 648  SDESHLLQFVEEEYMKEHALNLHSEKLAIAYGLIRMEPSQPIRIVKNLRVCGDCHSVAKL 707

Query: 130  ISKFYDREILLRDRYRFHHFKVGNCSCMDYW 38
            ISK Y+R+ILLRDRYRFHHF  GNCSCMDYW
Sbjct: 708  ISKLYNRDILLRDRYRFHHFSGGNCSCMDYW 738


>ref|XP_004145320.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
            chloroplastic-like [Cucumis sativus]
            gi|449470513|ref|XP_004152961.1| PREDICTED:
            pentatricopeptide repeat-containing protein At2g29760,
            chloroplastic-like [Cucumis sativus]
            gi|449523079|ref|XP_004168552.1| PREDICTED:
            pentatricopeptide repeat-containing protein At2g29760,
            chloroplastic-like [Cucumis sativus]
          Length = 733

 Score =  227 bits (579), Expect = 7e-58
 Identities = 104/151 (68%), Positives = 127/151 (84%)
 Frame = -3

Query: 490  TRLRKRMRDFGIKKEPGCSSIEVDGSVHEFLVGDNSHPLCKKVYLKLDEILLNLKSVGYI 311
            + LRK MRD  +KKEPGCSSIE +G+VHEFLVGDN+HPL   +Y KL+EI   LKSVGY 
Sbjct: 583  SELRKLMRDTELKKEPGCSSIEANGNVHEFLVGDNTHPLSSNIYSKLEEIATKLKSVGYE 642

Query: 310  ADKSHLLQDVEEEDVKDQALYLHSEKLAIAYGLISTRSPVPIRIVKNLRVCGDCHSVAKL 131
             +KSHLLQ +EE+D+K+QAL LHSEKLAIA+GL++     PIR+VKNLR+CGDCH+ AKL
Sbjct: 643  PNKSHLLQLIEEDDLKEQALSLHSEKLAIAFGLVTLAPSQPIRVVKNLRICGDCHAFAKL 702

Query: 130  ISKFYDREILLRDRYRFHHFKVGNCSCMDYW 38
            +S+ YDR+ILLRDRYRFHHF+ G+CSCMDYW
Sbjct: 703  VSRVYDRDILLRDRYRFHHFRDGHCSCMDYW 733


>ref|XP_002879234.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
            gi|297325073|gb|EFH55493.1| predicted protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 740

 Score =  219 bits (558), Expect = 2e-55
 Identities = 99/151 (65%), Positives = 126/151 (83%)
 Frame = -3

Query: 490  TRLRKRMRDFGIKKEPGCSSIEVDGSVHEFLVGDNSHPLCKKVYLKLDEILLNLKSVGYI 311
            + LRK MR  G+KKEPGCSSIE+DG +HEFL GDN+HP+ +KVY KL E++  LKS GY 
Sbjct: 590  SELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYE 649

Query: 310  ADKSHLLQDVEEEDVKDQALYLHSEKLAIAYGLISTRSPVPIRIVKNLRVCGDCHSVAKL 131
             + SH+LQ +EEE++K+Q+L LHSEKLAI YGLIST +P  IR++KNLR+CGDCH+VAKL
Sbjct: 650  PEMSHVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKAIRVIKNLRMCGDCHAVAKL 709

Query: 130  ISKFYDREILLRDRYRFHHFKVGNCSCMDYW 38
            IS+ Y+REI++RDRYRFHHF+ G CSC D+W
Sbjct: 710  ISQLYNREIIVRDRYRFHHFRNGQCSCNDFW 740