BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00025085
         (738 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|2...   102   1e-19
ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ...   101   1e-19
emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]    99   7e-19
ref|XP_003523538.1| PREDICTED: F-box protein SKIP23-like [Glycin...    90   6e-16
ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus ...    86   1e-14

>ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|222842400|gb|EEE79947.1|
           predicted protein [Populus trichocarpa]
          Length = 393

 Score =  102 bits (253), Expect = 1e-19
 Identities = 67/187 (35%), Positives = 91/187 (48%), Gaps = 8/187 (4%)
 Frame = +1

Query: 1   ICFRDQFYFVHSVGDVFSCELSHDSSDPKMSKVASSPFFCDGTQSKYLVESFGXXXXXXX 180
           I F   FY V+  G +  C+++ +S  PK+S + +      G   +YLV S         
Sbjct: 217 IYFNGLFYAVNKAGQIVVCDVNGNS--PKVSFIETPRQI--GGDMQYLVSSGDGLLLVTR 272

Query: 181 XXXXXXXXXXXXXFTRGFLVFKLDLIALKWVELKSICGRTIFLGDNSSFSVSAFDFPGCR 360
                         T  F VFKLDL   +W  + S+    +F+G+NSS ++SA    GC 
Sbjct: 273 YLDLDVEFDIFIYKTARFEVFKLDLNGPRWERVTSLGDMMLFIGENSSLALSASGLSGCM 332

Query: 361 PDCIYVTDDY----HEGYMHVKRHGIGPHDIGVFNLEDGSYE--PCYTRK--SNLLLPRP 516
            DCIY TDDY    ++G+       IG HD+G+F L DGS E  PCY R   S L  P P
Sbjct: 333 GDCIYYTDDYSANNYDGH-------IGEHDLGIFKLSDGSIEPLPCYPRNSYSRLQWPPP 385

Query: 517 IWIEPTP 537
           +WI P P
Sbjct: 386 LWISPNP 392


>ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 389

 Score =  101 bits (252), Expect = 1e-19
 Identities = 67/184 (36%), Positives = 90/184 (48%), Gaps = 5/184 (2%)
 Frame = +1

Query: 1   ICFRDQFYFVHSVGDVFSCELSHDSSDPKMSKVASSPFFCDGTQSKYLVESFGXXXXXXX 180
           I  R  FY V+  G +  C++S   S P++S +     F  G   +YLVES         
Sbjct: 213 IFHRGLFYAVNKYGSIAVCDVS--GSSPRVSIIEMPQQF--GGDLQYLVESGEELLLVTR 268

Query: 181 XXXXXXXXXXXXXF----TRGFLVFKLDLIALKWVELKSICGRTIFLGDNSSFSVSAFDF 348
                             T  F V +LDL A +W  + S+  R +FLG+N S S+S+ DF
Sbjct: 269 YLDLTYDVEPDQTSLIYRTTRFQVCRLDLKAPRWEVVSSLGDRALFLGENLSLSLSSVDF 328

Query: 349 PGCRPDCIYVTDDYHEGYMHVKRHGI-GPHDIGVFNLEDGSYEPCYTRKSNLLLPRPIWI 525
           PGC+ +CIY TDDY E        GI G  D+G+FNLEDGS EP       +  P P+W+
Sbjct: 329 PGCKGNCIYYTDDYSED----NYDGIGGEQDLGIFNLEDGSIEPLPCSHFRIRWPPPLWV 384

Query: 526 EPTP 537
            P P
Sbjct: 385 TPNP 388


>emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]
          Length = 389

 Score = 99.4 bits (246), Expect = 7e-19
 Identities = 67/184 (36%), Positives = 90/184 (48%), Gaps = 5/184 (2%)
 Frame = +1

Query: 1   ICFRDQFYFVHSVGDVFSCELSHDSSDPKMSKVASSPFFCDGTQSKYLVESFGXXXXXXX 180
           I  R  FY V+  G +  C++S   S P++S +     F  G   +YLVES         
Sbjct: 213 IFHRGLFYAVNKYGSIAVCDVS--GSSPRVSIIEMPQQF--GGDLQYLVESGEELLLVTR 268

Query: 181 XXXXXXXXXXXXXF----TRGFLVFKLDLIALKWVELKSICGRTIFLGDNSSFSVSAFDF 348
                             T  F V +LD  A +W  + S+  R +FLG+N S S+S+ DF
Sbjct: 269 YLDLTYDVEXDQTSLIYRTTRFQVCRLDSKAPRWEVVSSLGDRALFLGENLSLSLSSVDF 328

Query: 349 PGCRPDCIYVTDDYHEGYMHVKRHGI-GPHDIGVFNLEDGSYEPCYTRKSNLLLPRPIWI 525
           PGC+ +CIY TDDY E        GI G  D+G+FNLEDGS EP       +  P P+W+
Sbjct: 329 PGCKGNCIYYTDDYSED----NYDGIGGEQDLGIFNLEDGSIEPLPCSHFRIRWPPPLWV 384

Query: 526 EPTP 537
            P P
Sbjct: 385 TPNP 388


>ref|XP_003523538.1| PREDICTED: F-box protein SKIP23-like [Glycine max]
          Length = 393

 Score = 89.7 bits (221), Expect = 6e-16
 Identities = 49/109 (44%), Positives = 61/109 (55%), Gaps = 4/109 (3%)
 Frame = +1

Query: 223 TRGFLVFKLDLIALKWVELKSICGRTIFLGDNSSFSVSAFDFPGCRPDCIYVTDDYHEGY 402
           T GF VFK++   L W  ++++  R +F+G NSS S  A DF GC  DCIY TDDY E  
Sbjct: 287 TVGFEVFKMNWGLLTWQRVETLGERVLFVGGNSSLSFCASDFVGCSADCIYFTDDYSESN 346

Query: 403 MHVKRHGIGPHDIGVFNLEDGSYE--PCYTRK--SNLLLPRPIWIEPTP 537
                   G HD+GVF L D S E  PC+ +   S L  P PIW+ P P
Sbjct: 347 ---DDDACGKHDLGVFRLRDKSIEPLPCFNQNSCSRLRWPLPIWVSPNP 392


>ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223551319|gb|EEF52805.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 398

 Score = 85.5 bits (210), Expect = 1e-14
 Identities = 60/187 (32%), Positives = 89/187 (47%), Gaps = 14/187 (7%)
 Frame = +1

Query: 19  FYFVHSVGDVFSCELSHDSSDPKMSKVASSPFFCDGTQSKYLVES------FGXXXXXXX 180
           FY V+  G +  C++S DS  P++S + +      G   +YLV S               
Sbjct: 222 FYAVNKAGQIVICDISSDS--PRVSFMETPRQA--GGDMQYLVNSGDELLLVTRYLDLEY 277

Query: 181 XXXXXXXXXXXXXFTRGFLVFKLDLIALKWVELKSICGRTIFLGDNSSFSVSAFDFPGCR 360
                         T  F VF+LD    +W+ + ++  + +F+G+NSS S+SA DF GC 
Sbjct: 278 EFDHPDMEPHLIYRTIRFEVFRLDWNGPQWLRMSTLGDKALFIGENSSLSLSATDFSGCM 337

Query: 361 PDCIYVTDDY----HEGYMHVKRHGIGPHDIGVFNLEDGSYE--PCYTRK--SNLLLPRP 516
            +CIY TDDY    ++G+        G HD+G+F L D + E  PCY R   S L    P
Sbjct: 338 GNCIYYTDDYLDANYDGH-------FGDHDLGIFKLCDETIEPLPCYPRNFTSPLQWSPP 390

Query: 517 IWIEPTP 537
           +W+ P P
Sbjct: 391 LWVSPNP 397