BLASTX nr result

ID: Coptis21_contig00025063 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00025063
         (460 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAA81526.1| 14 kDa polypeptide [Catharanthus roseus]              170   1e-40
emb|CAA59472.1| hybrid proline-rich protein [Catharanthus roseus]     170   1e-40
dbj|BAA11854.1| extensin like protein [Populus nigra] gi|1199774...   167   6e-40
gb|ABG91752.1| HyPRP2 [Gossypium hirsutum]                            167   1e-39
ref|XP_002271792.1| PREDICTED: 14 kDa proline-rich protein DC2.1...   166   2e-39

>emb|CAA81526.1| 14 kDa polypeptide [Catharanthus roseus]
          Length = 138

 Score =  170 bits (430), Expect = 1e-40
 Identities = 84/138 (60%), Positives = 100/138 (72%), Gaps = 3/138 (2%)
 Frame = -1

Query: 433 MAFKISTSAVLFLSLNILFFAVVTACSHPPKQAPNPYV-PTPSTPTP--APKGTCPRDAL 263
           MA K +++  LFL+LN++FF +V+AC   PK  P P   P PS P P   PK TCPRDAL
Sbjct: 1   MASKSTSALALFLALNLIFFTLVSACGDCPKPKPKPKPKPKPSCPPPPYVPKATCPRDAL 60

Query: 262 KLGVCAKLLGGLVTVQVGSPPDIPCCTLIKGLVDLEAAVCLCTAIRANVLGINLNVPXXX 83
           KLGVCA LLGGL++  +G+PP  PCC+LI+GL DLEAAVCLCTAI+ANVLGINLNVP   
Sbjct: 61  KLGVCADLLGGLISAVIGAPPKTPCCSLIEGLADLEAAVCLCTAIKANVLGINLNVPVSL 120

Query: 82  XXXLNTCGKKAPTGFQCS 29
              LN C KK P GF C+
Sbjct: 121 TLLLNVCSKKVPEGFICA 138


>emb|CAA59472.1| hybrid proline-rich protein [Catharanthus roseus]
          Length = 138

 Score =  170 bits (430), Expect = 1e-40
 Identities = 84/138 (60%), Positives = 100/138 (72%), Gaps = 3/138 (2%)
 Frame = -1

Query: 433 MAFKISTSAVLFLSLNILFFAVVTACSHPPKQAPNPYV-PTPSTPTP--APKGTCPRDAL 263
           MA K +++  LFL+LN++FF +V+AC   PK  P P   P PS P P   PK TCPRDAL
Sbjct: 1   MASKSTSALALFLALNLIFFTLVSACGDCPKPKPKPKPKPKPSCPPPPYVPKATCPRDAL 60

Query: 262 KLGVCAKLLGGLVTVQVGSPPDIPCCTLIKGLVDLEAAVCLCTAIRANVLGINLNVPXXX 83
           KLGVCA LLGGL++  +G+PP  PCC+LI+GL DLEAAVCLCTAI+ANVLGINLNVP   
Sbjct: 61  KLGVCADLLGGLISAVIGAPPKTPCCSLIEGLADLEAAVCLCTAIKANVLGINLNVPVSL 120

Query: 82  XXXLNTCGKKAPTGFQCS 29
              LN C KK P GF C+
Sbjct: 121 SLLLNVCSKKVPEGFICA 138


>dbj|BAA11854.1| extensin like protein [Populus nigra] gi|1199774|dbj|BAA11855.1|
           extensin like protein [Populus nigra]
          Length = 141

 Score =  167 bits (424), Expect = 6e-40
 Identities = 85/141 (60%), Positives = 101/141 (71%), Gaps = 6/141 (4%)
 Frame = -1

Query: 433 MAFKISTSAVLFLSLNILFFAVVTAC-----SHPPKQAPNPYVPTPSTPTPAPKG-TCPR 272
           MA K + S  LFL+LN+LFF++VTAC     S  PK  P P      TPTP+P G  CP+
Sbjct: 1   MASKSTASLALFLALNLLFFSLVTACGGGCPSPKPKPKPKPKPKPTPTPTPSPSGGKCPK 60

Query: 271 DALKLGVCAKLLGGLVTVQVGSPPDIPCCTLIKGLVDLEAAVCLCTAIRANVLGINLNVP 92
           DALKLGVCA LLG L+ V VG+PP  PCC++I+GL+DLEAAVCLCTAI+AN+LGINLN+P
Sbjct: 61  DALKLGVCADLLGSLLNVTVGTPPVKPCCSVIQGLLDLEAAVCLCTAIKANILGINLNIP 120

Query: 91  XXXXXXLNTCGKKAPTGFQCS 29
                 LN CGKK P  FQCS
Sbjct: 121 LSLSLLLNVCGKKVPKDFQCS 141


>gb|ABG91752.1| HyPRP2 [Gossypium hirsutum]
          Length = 137

 Score =  167 bits (422), Expect = 1e-39
 Identities = 82/136 (60%), Positives = 96/136 (70%), Gaps = 2/136 (1%)
 Frame = -1

Query: 433 MAFKISTSAVLFLSLNILFFAVVTACSHPPKQAPNPYVPTPSTPTPAPK--GTCPRDALK 260
           M  K + S  LF +LNILFF++V+AC   P   P P       PTP+P   G CPRDALK
Sbjct: 1   MGSKRTASLALFFALNILFFSLVSACGSCPSPNPKPKPKPKPNPTPSPSSSGKCPRDALK 60

Query: 259 LGVCAKLLGGLVTVQVGSPPDIPCCTLIKGLVDLEAAVCLCTAIRANVLGINLNVPXXXX 80
           LGVCA LLGGL+ V +G+PP  PCC+LI+GL DLEAAVCLCTAI+AN+LGINLNVP    
Sbjct: 61  LGVCADLLGGLLNVTIGTPPVQPCCSLIQGLADLEAAVCLCTAIKANILGINLNVPLSLS 120

Query: 79  XXLNTCGKKAPTGFQC 32
             LN C KK P+GFQC
Sbjct: 121 LLLNVCSKKVPSGFQC 136


>ref|XP_002271792.1| PREDICTED: 14 kDa proline-rich protein DC2.15 isoform 1 [Vitis
           vinifera] gi|359474359|ref|XP_003631442.1| PREDICTED: 14
           kDa proline-rich protein DC2.15 [Vitis vinifera]
           gi|147854119|emb|CAN80710.1| hypothetical protein
           VITISV_033377 [Vitis vinifera]
          Length = 135

 Score =  166 bits (420), Expect = 2e-39
 Identities = 86/138 (62%), Positives = 101/138 (73%), Gaps = 3/138 (2%)
 Frame = -1

Query: 433 MAFKISTSAVLFLSLNILFFAVVTACS---HPPKQAPNPYVPTPSTPTPAPKGTCPRDAL 263
           MA K S S   FL +N+LFFA+V+AC     PPK   NP  PTPS P+PA + TCP+D L
Sbjct: 1   MASKSSASLAFFLLVNLLFFAIVSACGTCPSPPKSKTNPR-PTPS-PSPA-RATCPKDTL 57

Query: 262 KLGVCAKLLGGLVTVQVGSPPDIPCCTLIKGLVDLEAAVCLCTAIRANVLGINLNVPXXX 83
           KLGVC  LLGGL+ V VG+PP  PCC+LI+GL DLEAAVCLCTAI+ANVLGINLN+P   
Sbjct: 58  KLGVCVDLLGGLLGVVVGNPPKTPCCSLIQGLADLEAAVCLCTAIKANVLGINLNIPLSL 117

Query: 82  XXXLNTCGKKAPTGFQCS 29
              LN C KK P+GFQC+
Sbjct: 118 SLLLNVCSKKVPSGFQCA 135


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