BLASTX nr result

ID: Coptis21_contig00025046 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00025046
         (451 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272261.1| PREDICTED: uncharacterized protein LOC100242...   118   4e-25
ref|XP_002875391.1| hypothetical protein ARALYDRAFT_347129 [Arab...   105   3e-21
dbj|BAB01282.1| unnamed protein product [Arabidopsis thaliana]        105   3e-21
ref|NP_566819.1| uncharacterized protein [Arabidopsis thaliana] ...   105   3e-21
ref|XP_004141114.1| PREDICTED: uncharacterized protein LOC101219...   104   7e-21

>ref|XP_002272261.1| PREDICTED: uncharacterized protein LOC100242256 [Vitis vinifera]
           gi|296087589|emb|CBI34845.3| unnamed protein product
           [Vitis vinifera]
          Length = 174

 Score =  118 bits (296), Expect = 4e-25
 Identities = 66/152 (43%), Positives = 90/152 (59%), Gaps = 2/152 (1%)
 Frame = +2

Query: 2   NDYGFIHKRRKRQQQQVSTLPDTSSSAVHFETD-LKQWKKIALSKLKTRYQKELSHWELL 178
           ND GF++KR+KR+   +   P         E D  ++ KK AL K+K +YQ+E+ HWE L
Sbjct: 14  NDDGFVYKRKKRRLDALPVAPAPPLPDPQAEEDHRRERKKRALIKIKEKYQREIDHWEHL 73

Query: 179 SNGLKTMEENAQLRRQTQSLESGTESSE-RDTQMGNSSFHSQLDELLLQVEAQEAVINDV 355
           SN L+ MEE A  +++ Q  E  + S    D+        + +DELLLQ EAQEA+I+DV
Sbjct: 74  SNTLRAMEETAHQQQRRQQHEQASLSLPLADSPSSEFVCRTLVDELLLQAEAQEAIIHDV 133

Query: 356 LKLCDAVEAMCXXXXXRVKQPFFDLPVWGSPR 451
             LCD  EAM      ++KQ F DLP+WGSPR
Sbjct: 134 SNLCDVAEAMYNVQDEQLKQSFIDLPIWGSPR 165


>ref|XP_002875391.1| hypothetical protein ARALYDRAFT_347129 [Arabidopsis lyrata subsp.
           lyrata] gi|297321229|gb|EFH51650.1| hypothetical protein
           ARALYDRAFT_347129 [Arabidopsis lyrata subsp. lyrata]
          Length = 199

 Score =  105 bits (263), Expect = 3e-21
 Identities = 65/169 (38%), Positives = 88/169 (52%), Gaps = 20/169 (11%)
 Frame = +2

Query: 2   NDYGFIHKRRKRQQ----QQVSTLPDTSSSAVHFETDLKQWKKIALSKLKTRYQKELSHW 169
           ND GF++KR+KR +    ++    PD     V  E + +  KK  L KLK +YQ E+  W
Sbjct: 22  NDDGFVYKRKKRSRIADAEETLKPPDPELDPVVEERNRRIRKKRILVKLKRKYQSEIEQW 81

Query: 170 ELLSNGLKTMEENAQLRRQTQSLESGTESSERDTQMGNSSF----------------HSQ 301
           E+LSN L +M+  A  R QT   E  + + E  +   N+S+                 S 
Sbjct: 82  EILSNSLNSMQVKAD-RFQTTQREEMSNAKETISFPENASYTKEGAREFGGEDASAPSSM 140

Query: 302 LDELLLQVEAQEAVINDVLKLCDAVEAMCXXXXXRVKQPFFDLPVWGSP 448
           LD+LL   E+QEAVINDV KLC+  E +C       KQ FFDLP+W SP
Sbjct: 141 LDQLLFMAESQEAVINDVSKLCEVAENICRIEEEEKKQSFFDLPIWSSP 189


>dbj|BAB01282.1| unnamed protein product [Arabidopsis thaliana]
          Length = 222

 Score =  105 bits (263), Expect = 3e-21
 Identities = 66/169 (39%), Positives = 86/169 (50%), Gaps = 21/169 (12%)
 Frame = +2

Query: 5   DYGFIHKRRKRQQ----QQVSTLPDTSSSAVHFETDLKQWKKIALSKLKTRYQKELSHWE 172
           D GF++ R+KR +    ++ S  PD     V  E + +  KK  L KLK +YQ E+  WE
Sbjct: 45  DDGFVYNRKKRTRFADAEETSKPPDPELDRVVEERNRRIRKKRLLVKLKRKYQSEIDQWE 104

Query: 173 LLSNGLKTMEENAQLRRQTQSLESGTESSERDTQMGNSSF-----------------HSQ 301
           +LSN    M+E A  R QT   E    ++E  +  GNSS                   S 
Sbjct: 105 ILSNSFNAMQEKAD-RFQTAQREERLNANETMSFPGNSSSTTEGGREFGGEDASKSPSSM 163

Query: 302 LDELLLQVEAQEAVINDVLKLCDAVEAMCXXXXXRVKQPFFDLPVWGSP 448
           LD+LL  VE QEAVIN+V KLC+  E +C       KQ FFDLP+W SP
Sbjct: 164 LDQLLFTVERQEAVINEVSKLCEVTENICRVEEEETKQSFFDLPIWSSP 212


>ref|NP_566819.1| uncharacterized protein [Arabidopsis thaliana]
           gi|21537206|gb|AAM61547.1| unknown [Arabidopsis
           thaliana] gi|26450193|dbj|BAC42215.1| unknown protein
           [Arabidopsis thaliana] gi|28827404|gb|AAO50546.1|
           unknown protein [Arabidopsis thaliana]
           gi|332643812|gb|AEE77333.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 198

 Score =  105 bits (263), Expect = 3e-21
 Identities = 66/169 (39%), Positives = 86/169 (50%), Gaps = 21/169 (12%)
 Frame = +2

Query: 5   DYGFIHKRRKRQQ----QQVSTLPDTSSSAVHFETDLKQWKKIALSKLKTRYQKELSHWE 172
           D GF++ R+KR +    ++ S  PD     V  E + +  KK  L KLK +YQ E+  WE
Sbjct: 21  DDGFVYNRKKRTRFADAEETSKPPDPELDRVVEERNRRIRKKRLLVKLKRKYQSEIDQWE 80

Query: 173 LLSNGLKTMEENAQLRRQTQSLESGTESSERDTQMGNSSF-----------------HSQ 301
           +LSN    M+E A  R QT   E    ++E  +  GNSS                   S 
Sbjct: 81  ILSNSFNAMQEKAD-RFQTAQREERLNANETMSFPGNSSSTTEGGREFGGEDASKSPSSM 139

Query: 302 LDELLLQVEAQEAVINDVLKLCDAVEAMCXXXXXRVKQPFFDLPVWGSP 448
           LD+LL  VE QEAVIN+V KLC+  E +C       KQ FFDLP+W SP
Sbjct: 140 LDQLLFTVERQEAVINEVSKLCEVTENICRVEEEETKQSFFDLPIWSSP 188


>ref|XP_004141114.1| PREDICTED: uncharacterized protein LOC101219806 [Cucumis sativus]
          Length = 192

 Score =  104 bits (260), Expect = 7e-21
 Identities = 60/165 (36%), Positives = 97/165 (58%), Gaps = 15/165 (9%)
 Frame = +2

Query: 2   NDYGFIHKRRKRQQQQVSTLPDTSSSAVHFETDLKQ-----WKKIALSKLKTRYQKELSH 166
           ND GF++KR++R+      +   SS+A   + + ++      ++  L K++ +YQ+E+  
Sbjct: 22  NDDGFVYKRKRRRLDPAEPVAARSSAAQAVDLEAEENRRRDRRRKTLLKVRAKYQREIEQ 81

Query: 167 WELLSNGLKTMEENA-----QLRRQTQS-----LESGTESSERDTQMGNSSFHSQLDELL 316
           WE+LS  L+ MEE A     Q RR  +      LE+ + +  R+ ++   S+ S +D+LL
Sbjct: 82  WEVLSGTLREMEERARNLQEQYRRHGEQGPPSLLEASSLTVVREKEL---SYASMVDDLL 138

Query: 317 LQVEAQEAVINDVLKLCDAVEAMCXXXXXRVKQPFFDLPVWGSPR 451
            QVEAQ+A+I++V K CD  EA+C     R+KQ   DLP+WGSPR
Sbjct: 139 SQVEAQDALISNVSKFCDIAEALCQTEEDRLKQRLIDLPIWGSPR 183


Top