BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00025042
         (608 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15551.3| unnamed protein product [Vitis vinifera]              318   5e-85
ref|XP_003634283.1| PREDICTED: pentatricopeptide repeat-containi...   318   5e-85
ref|XP_002872815.1| pentatricopeptide repeat-containing protein ...   307   8e-82
dbj|BAD23598.1| putative pentatricopeptide (PPR) repeat-containi...   307   1e-81
gb|EAZ44271.1| hypothetical protein OsJ_28890 [Oryza sativa Japo...   307   1e-81

>emb|CBI15551.3| unnamed protein product [Vitis vinifera]
          Length = 685

 Score =  318 bits (815), Expect = 5e-85
 Identities = 146/178 (82%), Positives = 165/178 (92%)
 Frame = +1

Query: 4    IFKMEPDNSGMYVLLSNLYADSG*WSDVGKMRVVMRDRGVKKVPGYSWIEAQNKVHTFSV 183
            IF+MEPDNSGMYVLLSNLYA SG W DVG+MR+ MRDRGVKKVPGYSW+E QNK+HTF+V
Sbjct: 508  IFEMEPDNSGMYVLLSNLYAASGRWGDVGRMRLRMRDRGVKKVPGYSWVEVQNKIHTFTV 567

Query: 184  GDSVHPEKDKIYAFLEDLDRRLKKEGYVSKTKMVLHDVEEEEKEHMLKYHSEKIAVAYGL 363
            GDSVHPE+D+IY FLE+LD ++KKEGYVS TK+VLHDVEEEEK HMLKYHSEK+AVA+G+
Sbjct: 568  GDSVHPERDRIYTFLEELDLKMKKEGYVSSTKLVLHDVEEEEKVHMLKYHSEKLAVAFGI 627

Query: 364  LTVPAGRPIRVIKNLRVCEDCHNAIKYISKIVGRLIIL*DSNRFHHFNCGSCSCGDYW 537
            L +PAGRPIRVIKNLRVCEDCHNA+K+ISKIVGRLIIL DS+RFHHFN G CSCGDYW
Sbjct: 628  LAIPAGRPIRVIKNLRVCEDCHNAMKHISKIVGRLIILRDSHRFHHFNGGQCSCGDYW 685


>ref|XP_003634283.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02750-like
            [Vitis vinifera]
          Length = 766

 Score =  318 bits (815), Expect = 5e-85
 Identities = 146/178 (82%), Positives = 165/178 (92%)
 Frame = +1

Query: 4    IFKMEPDNSGMYVLLSNLYADSG*WSDVGKMRVVMRDRGVKKVPGYSWIEAQNKVHTFSV 183
            IF+MEPDNSGMYVLLSNLYA SG W DVG+MR+ MRDRGVKKVPGYSW+E QNK+HTF+V
Sbjct: 589  IFEMEPDNSGMYVLLSNLYAASGRWGDVGRMRLRMRDRGVKKVPGYSWVEVQNKIHTFTV 648

Query: 184  GDSVHPEKDKIYAFLEDLDRRLKKEGYVSKTKMVLHDVEEEEKEHMLKYHSEKIAVAYGL 363
            GDSVHPE+D+IY FLE+LD ++KKEGYVS TK+VLHDVEEEEK HMLKYHSEK+AVA+G+
Sbjct: 649  GDSVHPERDRIYTFLEELDLKMKKEGYVSSTKLVLHDVEEEEKVHMLKYHSEKLAVAFGI 708

Query: 364  LTVPAGRPIRVIKNLRVCEDCHNAIKYISKIVGRLIIL*DSNRFHHFNCGSCSCGDYW 537
            L +PAGRPIRVIKNLRVCEDCHNA+K+ISKIVGRLIIL DS+RFHHFN G CSCGDYW
Sbjct: 709  LAIPAGRPIRVIKNLRVCEDCHNAMKHISKIVGRLIILRDSHRFHHFNGGQCSCGDYW 766


>ref|XP_002872815.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata] gi|297318652|gb|EFH49074.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 776

 Score =  307 bits (787), Expect = 8e-82
 Identities = 142/179 (79%), Positives = 160/179 (89%)
 Frame = +1

Query: 1    KIFKMEPDNSGMYVLLSNLYADSG*WSDVGKMRVVMRDRGVKKVPGYSWIEAQNKVHTFS 180
            KIF MEP+NSGMYVLLSNLYA SG W DVGK+RV MRD+GVKKVPGYSWIE QNK HTFS
Sbjct: 598  KIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFS 657

Query: 181  VGDSVHPEKDKIYAFLEDLDRRLKKEGYVSKTKMVLHDVEEEEKEHMLKYHSEKIAVAYG 360
            VGD  HPEKD+I+AFLEDLD R+KK GYVSKT +VLHDVEEEEKE M++YHSE++AVAYG
Sbjct: 658  VGDEFHPEKDEIFAFLEDLDLRMKKAGYVSKTSVVLHDVEEEEKERMVRYHSERLAVAYG 717

Query: 361  LLTVPAGRPIRVIKNLRVCEDCHNAIKYISKIVGRLIIL*DSNRFHHFNCGSCSCGDYW 537
            ++ V +GRPIRVIKNLRVCEDCHNAIKY++K+ GRLIIL D+NRFHHF  GSCSCGDYW
Sbjct: 718  IMRVSSGRPIRVIKNLRVCEDCHNAIKYMAKVTGRLIILRDNNRFHHFKDGSCSCGDYW 776


>dbj|BAD23598.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
            sativa Japonica Group]
          Length = 755

 Score =  307 bits (786), Expect = 1e-81
 Identities = 143/179 (79%), Positives = 157/179 (87%)
 Frame = +1

Query: 1    KIFKMEPDNSGMYVLLSNLYADSG*WSDVGKMRVVMRDRGVKKVPGYSWIEAQNKVHTFS 180
            KIF++EP+N+GMYVLLSN+YA SG W D  KMRV+M +RGVKKVPG+SWIE QNKVHTFS
Sbjct: 577  KIFELEPENAGMYVLLSNIYASSGKWRDARKMRVMMEERGVKKVPGFSWIEVQNKVHTFS 636

Query: 181  VGDSVHPEKDKIYAFLEDLDRRLKKEGYVSKTKMVLHDVEEEEKEHMLKYHSEKIAVAYG 360
             GD VHPEK+KIYAFLEDLD R+KK GYVS T MVLHDVEEEEKEHMLKYHSEK+AVAYG
Sbjct: 637  AGDCVHPEKEKIYAFLEDLDMRMKKAGYVSATDMVLHDVEEEEKEHMLKYHSEKLAVAYG 696

Query: 361  LLTVPAGRPIRVIKNLRVCEDCHNAIKYISKIVGRLIIL*DSNRFHHFNCGSCSCGDYW 537
            +L +P GRPIRVIKNLRVC DCHNA KYIS I GRLI+L DSNRFHHF  GSCSCGDYW
Sbjct: 697  ILNIPPGRPIRVIKNLRVCGDCHNAFKYISAIEGRLILLRDSNRFHHFRGGSCSCGDYW 755


>gb|EAZ44271.1| hypothetical protein OsJ_28890 [Oryza sativa Japonica Group]
          Length = 630

 Score =  307 bits (786), Expect = 1e-81
 Identities = 143/179 (79%), Positives = 157/179 (87%)
 Frame = +1

Query: 1   KIFKMEPDNSGMYVLLSNLYADSG*WSDVGKMRVVMRDRGVKKVPGYSWIEAQNKVHTFS 180
           KIF++EP+N+GMYVLLSN+YA SG W D  KMRV+M +RGVKKVPG+SWIE QNKVHTFS
Sbjct: 452 KIFELEPENAGMYVLLSNIYASSGKWRDARKMRVMMEERGVKKVPGFSWIEVQNKVHTFS 511

Query: 181 VGDSVHPEKDKIYAFLEDLDRRLKKEGYVSKTKMVLHDVEEEEKEHMLKYHSEKIAVAYG 360
            GD VHPEK+KIYAFLEDLD R+KK GYVS T MVLHDVEEEEKEHMLKYHSEK+AVAYG
Sbjct: 512 AGDCVHPEKEKIYAFLEDLDMRMKKAGYVSATDMVLHDVEEEEKEHMLKYHSEKLAVAYG 571

Query: 361 LLTVPAGRPIRVIKNLRVCEDCHNAIKYISKIVGRLIIL*DSNRFHHFNCGSCSCGDYW 537
           +L +P GRPIRVIKNLRVC DCHNA KYIS I GRLI+L DSNRFHHF  GSCSCGDYW
Sbjct: 572 ILNIPPGRPIRVIKNLRVCGDCHNAFKYISAIEGRLILLRDSNRFHHFRGGSCSCGDYW 630