BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00025037
         (254 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527312.1| pentatricopeptide repeat-containing protein,...    84   1e-14
ref|XP_004161905.1| PREDICTED: pentatricopeptide repeat-containi...    74   1e-11
ref|XP_004139754.1| PREDICTED: pentatricopeptide repeat-containi...    74   1e-11
emb|CBI18867.3| unnamed protein product [Vitis vinifera]               74   1e-11
ref|XP_002284840.1| PREDICTED: pentatricopeptide repeat-containi...    74   1e-11

>ref|XP_002527312.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223533312|gb|EEF35064.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 802

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 39/73 (53%), Positives = 49/73 (67%)
 Frame = -3

Query: 228 YSDSQCTTSLQSEIVSALRVGDRDRAFNFLTAFTRSEQLLRPDDFIHILNYCANSPDTSF 49
           Y +     S+Q +I+ AL +G+R RA N L+    +  LLRP+DF+ IL YCA SPD  F
Sbjct: 51  YGEESTVKSIQKQILDALNLGERGRASNMLSDLGHANNLLRPNDFVDILRYCARSPDPLF 110

Query: 48  FMETWRIMEEKEI 10
            METWRIMEEKEI
Sbjct: 111 AMETWRIMEEKEI 123


>ref|XP_004161905.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g76280-like [Cucumis sativus]
          Length = 806

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 35/70 (50%), Positives = 48/70 (68%)
 Frame = -3

Query: 219 SQCTTSLQSEIVSALRVGDRDRAFNFLTAFTRSEQLLRPDDFIHILNYCANSPDTSFFME 40
           ++ T  +Q +IV+ALR+GDR RA N L    + +  L  D+F+ IL+YCA SPD  F ME
Sbjct: 66  AESTAFMQMQIVNALRLGDRSRASNLLMVLGQEKFSLTADNFVRILSYCAKSPDPLFVME 125

Query: 39  TWRIMEEKEI 10
           TW+IMEE+ I
Sbjct: 126 TWKIMEERGI 135


>ref|XP_004139754.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g76280-like [Cucumis sativus]
          Length = 834

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 35/70 (50%), Positives = 48/70 (68%)
 Frame = -3

Query: 219 SQCTTSLQSEIVSALRVGDRDRAFNFLTAFTRSEQLLRPDDFIHILNYCANSPDTSFFME 40
           ++ T  +Q +IV+ALR+GDR RA N L    + +  L  D+F+ IL+YCA SPD  F ME
Sbjct: 66  AESTAFMQMQIVNALRLGDRSRASNLLMVLGQEKFSLTADNFVRILSYCAKSPDPLFVME 125

Query: 39  TWRIMEEKEI 10
           TW+IMEE+ I
Sbjct: 126 TWKIMEERGI 135


>emb|CBI18867.3| unnamed protein product [Vitis vinifera]
          Length = 804

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 36/76 (47%), Positives = 47/76 (61%)
 Frame = -3

Query: 228 YSDSQCTTSLQSEIVSALRVGDRDRAFNFLTAFTRSEQLLRPDDFIHILNYCANSPDTSF 49
           Y     T  LQ +IV ALR  +R RA + L+   R    LR DDFI+IL +C+ SPD  F
Sbjct: 51  YGRKSITRLLQVQIVDALRSNERSRASSLLSELGRGNYSLRADDFIYILEHCSKSPDPLF 110

Query: 48  FMETWRIMEEKEIEMD 1
            ME WRIM+EKE+ ++
Sbjct: 111 VMEIWRIMDEKEVHVN 126


>ref|XP_002284840.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g76280-like [Vitis vinifera]
          Length = 728

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 36/76 (47%), Positives = 47/76 (61%)
 Frame = -3

Query: 228 YSDSQCTTSLQSEIVSALRVGDRDRAFNFLTAFTRSEQLLRPDDFIHILNYCANSPDTSF 49
           Y     T  LQ +IV ALR  +R RA + L+   R    LR DDFI+IL +C+ SPD  F
Sbjct: 15  YGRKSITRLLQVQIVDALRSNERSRASSLLSELGRGNYSLRADDFIYILEHCSKSPDPLF 74

Query: 48  FMETWRIMEEKEIEMD 1
            ME WRIM+EKE+ ++
Sbjct: 75  VMEIWRIMDEKEVHVN 90