BLASTX nr result

ID: Coptis21_contig00025036 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00025036
         (1219 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274716.1| PREDICTED: uncharacterized protein LOC100257...   202   1e-49
ref|XP_002519725.1| starch synthase, putative [Ricinus communis]...   174   4e-41
ref|NP_193558.3| starch synthase 4 [Arabidopsis thaliana] gi|122...   157   7e-36
emb|CAA16796.1| starch synthase-like protein [Arabidopsis thalia...   157   7e-36
ref|XP_002298514.1| predicted protein [Populus trichocarpa] gi|2...   137   7e-30

>ref|XP_002274716.1| PREDICTED: uncharacterized protein LOC100257130 [Vitis vinifera]
           gi|297740652|emb|CBI30834.3| unnamed protein product
           [Vitis vinifera]
          Length = 1011

 Score =  202 bits (515), Expect = 1e-49
 Identities = 141/332 (42%), Positives = 178/332 (53%), Gaps = 3/332 (0%)
 Frame = -1

Query: 988 MTTKPSTFFISHHSWRGLSYNHSNECLPTSSPRLILTCCKMRQRNLSFRNKRQQAKKVSP 809
           M  K ST F+SH  W  L    SN      S RL+   CKMR RN S ++KRQQ KKVSP
Sbjct: 1   MAAKLSTCFLSH-GWGSLDCKRSNGRFLAPSHRLLPASCKMRHRNFSSQHKRQQTKKVSP 59

Query: 808 GQLPVNESFQSSCENNTDADGETADSASENISDESTEVKSDIERTSSSRKISIDEDFRSN 629
            + P N  FQS+ + +T+ +   AD  S                       S+++    +
Sbjct: 60  DRRPTNSHFQSNGDEDTEPENALADGVS-----------------------SLNQGTTPD 96

Query: 628 DRSLNVKSSTVDHXXXXXXXXXXSDERVIDVIAKSMDGADFVGPTILEEAKFKIENARNG 449
           D   +V S                 E + D   K +        T+ EE      N ++G
Sbjct: 97  DEDADVDSHIAI-------------EHINDNPLKHL--------TVSEEMTPLGINVKSG 135

Query: 448 EHV---QLGDLIGMIKNAEKNILLLNQARVCALEDLDKILIEKEALQEDVNTLEMRLAET 278
           E +   QL DL+GM+KNAEKNILLLNQARV AL+DL+KIL EK+ALQ ++N LEMRLAET
Sbjct: 136 EQLSSFQLEDLVGMLKNAEKNILLLNQARVRALQDLEKILTEKDALQGEINILEMRLAET 195

Query: 277 DARIKVAAQEKIHVXXXXXXXXXXXXXXXXKGVTEGSKEGIDEKNIVSNKDNGSFNSLSK 98
           +ARIKVAAQEKIHV                +GVTEGS   + E     NK     +SL K
Sbjct: 196 NARIKVAAQEKIHVEILEEQLVNLRNELSHRGVTEGSGADMHEN---WNKAFDGVHSLGK 252

Query: 97  ELRLLRKENMSLKDDIRVLQEQLSNVNETDKR 2
           EL LLR EN+SLKDDI  L+E+LS+V +TDKR
Sbjct: 253 ELSLLRTENVSLKDDILALKEELSHVQKTDKR 284


>ref|XP_002519725.1| starch synthase, putative [Ricinus communis]
           gi|223541142|gb|EEF42698.1| starch synthase, putative
           [Ricinus communis]
          Length = 998

 Score =  174 bits (441), Expect = 4e-41
 Identities = 136/347 (39%), Positives = 184/347 (53%), Gaps = 19/347 (5%)
 Frame = -1

Query: 988 MTTKPSTFFISHHSWRGLSYNHSNECLPTSSP-----------RLILTCCKMRQRNLSF- 845
           M TKP+++F+S   +   + NH+N      +            RL+ T CKMRQRNLS  
Sbjct: 1   MATKPASWFLSQ-GYTVFNCNHNNHYHHNHNKQTNVRFFLPPHRLLPTSCKMRQRNLSSS 59

Query: 844 RNKRQQAKKVSPGQLPVNESFQSSCENNTDADGETADSASENISDESTEVKSDIERTSSS 665
           +NKRQQ KK SP   P    F+SS  ++ D D E A S        S +VKS +  TS+ 
Sbjct: 60  QNKRQQVKKASPEIPPTGGDFESSSGDDID-DSEVALS--------SLDVKS-VHYTSA- 108

Query: 664 RKISIDEDFRSNDRSLNVKSSTVDHXXXXXXXXXXSDERVIDVIAKSMDGADFVG----- 500
                 +D +SN  + + +                 D + +D + + M      G     
Sbjct: 109 ------KDEKSNTNAEHAQLG---------------DAKDLDNLTQEMKSLGIYGGEELS 147

Query: 499 --PTILEEAKFKIENARNGEHVQLGDLIGMIKNAEKNILLLNQARVCALEDLDKILIEKE 326
             P  ++ +  KI+       VQL DLIGMI+NAEKNILLLNQARV ALEDL +IL EKE
Sbjct: 148 SIPDEIKSSGLKIDGGEQLSRVQLEDLIGMIRNAEKNILLLNQARVNALEDLQRILAEKE 207

Query: 325 ALQEDVNTLEMRLAETDARIKVAAQEKIHVXXXXXXXXXXXXXXXXKGVTEGSKEGIDEK 146
            LQ ++N LEMRLAETDAR+KVAAQEKIHV                +  +E     ++E 
Sbjct: 208 ILQGEINILEMRLAETDARMKVAAQEKIHVDLMEDQLEKLRNELAYR--SENQSRLLNED 265

Query: 145 NIVSNKDNGSFNSLSKELRLLRKENMSLKDDIRVLQEQLSNVNETDK 5
             V    + + +SLS+EL  LR+EN SLK+DI  L+ +LSNV +TD+
Sbjct: 266 --VPLLQDTTLHSLSEELNSLREENTSLKNDIEALKLELSNVKDTDE 310


>ref|NP_193558.3| starch synthase 4 [Arabidopsis thaliana]
           gi|122230204|sp|Q0WVX5.1|SSY4_ARATH RecName:
           Full=Probable starch synthase 4,
           chloroplastic/amyloplastic; Short=AtSS4; AltName:
           Full=Soluble starch synthase IV; Flags: Precursor
           gi|110741548|dbj|BAE98723.1| starch synthase-like
           protein [Arabidopsis thaliana]
           gi|332658615|gb|AEE84015.1| starch synthase 4
           [Arabidopsis thaliana]
          Length = 1040

 Score =  157 bits (396), Expect = 7e-36
 Identities = 117/339 (34%), Positives = 174/339 (51%), Gaps = 10/339 (2%)
 Frame = -1

Query: 988 MTTKPSTFFISHHSWRGLS----YNHSNECLPTSSPRLILTCCKMRQRNLSFRNKRQQAK 821
           MTTK S+F    H   G+S    +  S       S RL+ T CKMRQ+     +KRQ+ K
Sbjct: 1   MTTKLSSFCFLTHGLAGISCEREHGSSRRFFYLPSRRLVSTSCKMRQQRGFDSSKRQEVK 60

Query: 820 KVSPGQ-LPVNESFQSSCENNTDADGETADSASENISD--ESTEVKSDIERTSSSRKISI 650
           K SP   L +N   QS+ +  +D +  +ADS     SD  + + +   I+   +   +  
Sbjct: 61  KGSPKPILSINSGLQSNNDEESDLENGSADSVPSLKSDAEKGSSIHGSIDMNHADENLEK 120

Query: 649 DEDFRSNDRSLNVKSSTVDHXXXXXXXXXXSDERVIDVIAKSMDGADFVGPTILEEAKFK 470
            +D ++ + +   KS T                  ID+     DG +    T+ E AK  
Sbjct: 121 KDDIQTTEVTRR-KSKTAKKKGESI-------HATIDI--GHDDGKNLDNITVPEVAKAL 170

Query: 469 IENARNGEHV---QLGDLIGMIKNAEKNILLLNQARVCALEDLDKILIEKEALQEDVNTL 299
             N   GE +   Q G+L+ MI++AEKNIL L++AR  AL+DL+KIL +KEALQ ++N L
Sbjct: 171 SLNKSEGEQISDGQFGELMTMIRSAEKNILRLDEARATALDDLNKILSDKEALQGEINVL 230

Query: 298 EMRLAETDARIKVAAQEKIHVXXXXXXXXXXXXXXXXKGVTEGSKEGIDEKNIVSNKDNG 119
           EM+L+ETD RIK AAQEK HV                  + E   E +  + I   + +G
Sbjct: 231 EMKLSETDERIKTAAQEKAHVE-----------------LLEEQLEKLRHEMISPIESDG 273

Query: 118 SFNSLSKELRLLRKENMSLKDDIRVLQEQLSNVNETDKR 2
              +LSKEL  L+ EN+SL++DI +L+ +L +V +T +R
Sbjct: 274 YVLALSKELETLKLENLSLRNDIEMLKSELDSVKDTGER 312


>emb|CAA16796.1| starch synthase-like protein [Arabidopsis thaliana]
           gi|7268617|emb|CAB78826.1| starch synthase-like protein
           [Arabidopsis thaliana]
          Length = 1071

 Score =  157 bits (396), Expect = 7e-36
 Identities = 117/339 (34%), Positives = 174/339 (51%), Gaps = 10/339 (2%)
 Frame = -1

Query: 988 MTTKPSTFFISHHSWRGLS----YNHSNECLPTSSPRLILTCCKMRQRNLSFRNKRQQAK 821
           MTTK S+F    H   G+S    +  S       S RL+ T CKMRQ+     +KRQ+ K
Sbjct: 1   MTTKLSSFCFLTHGLAGISCEREHGSSRRFFYLPSRRLVSTSCKMRQQRGFDSSKRQEVK 60

Query: 820 KVSPGQ-LPVNESFQSSCENNTDADGETADSASENISD--ESTEVKSDIERTSSSRKISI 650
           K SP   L +N   QS+ +  +D +  +ADS     SD  + + +   I+   +   +  
Sbjct: 61  KGSPKPILSINSGLQSNNDEESDLENGSADSVPSLKSDAEKGSSIHGSIDMNHADENLEK 120

Query: 649 DEDFRSNDRSLNVKSSTVDHXXXXXXXXXXSDERVIDVIAKSMDGADFVGPTILEEAKFK 470
            +D ++ + +   KS T                  ID+     DG +    T+ E AK  
Sbjct: 121 KDDIQTTEVTRR-KSKTAKKKGESI-------HATIDI--GHDDGKNLDNITVPEVAKAL 170

Query: 469 IENARNGEHV---QLGDLIGMIKNAEKNILLLNQARVCALEDLDKILIEKEALQEDVNTL 299
             N   GE +   Q G+L+ MI++AEKNIL L++AR  AL+DL+KIL +KEALQ ++N L
Sbjct: 171 SLNKSEGEQISDGQFGELMTMIRSAEKNILRLDEARATALDDLNKILSDKEALQGEINVL 230

Query: 298 EMRLAETDARIKVAAQEKIHVXXXXXXXXXXXXXXXXKGVTEGSKEGIDEKNIVSNKDNG 119
           EM+L+ETD RIK AAQEK HV                  + E   E +  + I   + +G
Sbjct: 231 EMKLSETDERIKTAAQEKAHVE-----------------LLEEQLEKLRHEMISPIESDG 273

Query: 118 SFNSLSKELRLLRKENMSLKDDIRVLQEQLSNVNETDKR 2
              +LSKEL  L+ EN+SL++DI +L+ +L +V +T +R
Sbjct: 274 YVLALSKELETLKLENLSLRNDIEMLKSELDSVKDTGER 312


>ref|XP_002298514.1| predicted protein [Populus trichocarpa] gi|222845772|gb|EEE83319.1|
           predicted protein [Populus trichocarpa]
          Length = 887

 Score =  137 bits (344), Expect = 7e-30
 Identities = 84/168 (50%), Positives = 108/168 (64%), Gaps = 3/168 (1%)
 Frame = -1

Query: 496 TILEEAKFKIENARNGEH---VQLGDLIGMIKNAEKNILLLNQARVCALEDLDKILIEKE 326
           T+ +EAK    N   GE    +QL DLIGMI+NAEKN LLLN+ARV AL+DL++I  EK+
Sbjct: 9   TVPQEAKSLAVNMGGGEQLSSIQLEDLIGMIRNAEKNTLLLNKARVFALDDLERIFHEKD 68

Query: 325 ALQEDVNTLEMRLAETDARIKVAAQEKIHVXXXXXXXXXXXXXXXXKGVTEGSKEGIDEK 146
            LQ ++N LEMRLAE DA++KVAAQEKI V                    E ++ G  E+
Sbjct: 69  KLQGEINVLEMRLAENDAKMKVAAQEKIRVELLEAQLEKLR--------NELAQRGATER 120

Query: 145 NIVSNKDNGSFNSLSKELRLLRKENMSLKDDIRVLQEQLSNVNETDKR 2
           ++V        +SLS+EL LLR ENMSLK+DI  L+E+LSNV  TD+R
Sbjct: 121 SVV--------HSLSEELSLLRSENMSLKNDIEALREELSNVKNTDER 160


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