BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00025028
         (262 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532829.1| dead box ATP-dependent RNA helicase, putativ...   157   7e-37
ref|XP_004134588.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   152   4e-35
ref|XP_002279094.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   152   4e-35
ref|XP_002305441.1| predicted protein [Populus trichocarpa] gi|2...   148   5e-34
ref|NP_193320.6| RNA helicase 1 [Arabidopsis thaliana] gi|334302...   140   1e-31

>ref|XP_002532829.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223527420|gb|EEF29559.1| dead box ATP-dependent RNA
           helicase, putative [Ricinus communis]
          Length = 469

 Score =  157 bits (398), Expect = 7e-37
 Identities = 77/85 (90%), Positives = 85/85 (100%)
 Frame = +1

Query: 1   PTGSGKTLAYALPIVQMLSTRSVKCIRALVVLPTRDLALQVKQVFASIAPAVGLSVGLAV 180
           PTGSGKTLAYALPI+QMLSTRS+KC+RAL+VLPTRDLALQVKQVFA++APAVGLSVGLAV
Sbjct: 79  PTGSGKTLAYALPIIQMLSTRSIKCLRALIVLPTRDLALQVKQVFAALAPAVGLSVGLAV 138

Query: 181 GQTSIAGEISELIKRPKLEAGVCYD 255
           GQ+SIAGEISELIKRPKLEAG+CYD
Sbjct: 139 GQSSIAGEISELIKRPKLEAGICYD 163


>ref|XP_004134588.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 1-like [Cucumis
           sativus] gi|449490565|ref|XP_004158642.1| PREDICTED:
           DEAD-box ATP-dependent RNA helicase 1-like [Cucumis
           sativus]
          Length = 517

 Score =  152 bits (383), Expect = 4e-35
 Identities = 76/85 (89%), Positives = 84/85 (98%)
 Frame = +1

Query: 1   PTGSGKTLAYALPIVQMLSTRSVKCIRALVVLPTRDLALQVKQVFASIAPAVGLSVGLAV 180
           PTGSGKTLAYALPIVQMLS+R+VKC+RALVVLPTRDLALQVK+VF++IAPAVGLSVGLAV
Sbjct: 78  PTGSGKTLAYALPIVQMLSSRTVKCLRALVVLPTRDLALQVKEVFSAIAPAVGLSVGLAV 137

Query: 181 GQTSIAGEISELIKRPKLEAGVCYD 255
           GQ+SIA EISELIKRPKLEAG+CYD
Sbjct: 138 GQSSIADEISELIKRPKLEAGICYD 162


>ref|XP_002279094.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 1 [Vitis vinifera]
           gi|297740757|emb|CBI30939.3| unnamed protein product
           [Vitis vinifera]
          Length = 516

 Score =  152 bits (383), Expect = 4e-35
 Identities = 77/87 (88%), Positives = 84/87 (96%)
 Frame = +1

Query: 1   PTGSGKTLAYALPIVQMLSTRSVKCIRALVVLPTRDLALQVKQVFASIAPAVGLSVGLAV 180
           PTGSGKTLAYALPIV +LS+R+VKC+RALVVLPTRDLALQVK+VFA+IAPAVGLSVGLAV
Sbjct: 78  PTGSGKTLAYALPIVNVLSSRAVKCLRALVVLPTRDLALQVKEVFAAIAPAVGLSVGLAV 137

Query: 181 GQTSIAGEISELIKRPKLEAGVCYDLE 261
           GQTSIA EISELIKRPKLEAG+CYD E
Sbjct: 138 GQTSIADEISELIKRPKLEAGICYDPE 164


>ref|XP_002305441.1| predicted protein [Populus trichocarpa] gi|222848405|gb|EEE85952.1|
           predicted protein [Populus trichocarpa]
          Length = 518

 Score =  148 bits (373), Expect = 5e-34
 Identities = 74/85 (87%), Positives = 83/85 (97%)
 Frame = +1

Query: 1   PTGSGKTLAYALPIVQMLSTRSVKCIRALVVLPTRDLALQVKQVFASIAPAVGLSVGLAV 180
           PTGSGKTLAYALPIVQ+LSTR+VKC+RALVVLPTRDLALQVKQVFA+IAPA+GLSVGLAV
Sbjct: 81  PTGSGKTLAYALPIVQLLSTRAVKCLRALVVLPTRDLALQVKQVFAAIAPAMGLSVGLAV 140

Query: 181 GQTSIAGEISELIKRPKLEAGVCYD 255
           GQ+SIA EISELIK+P+ EAG+CYD
Sbjct: 141 GQSSIADEISELIKKPEHEAGICYD 165


>ref|NP_193320.6| RNA helicase 1 [Arabidopsis thaliana]
           gi|334302879|sp|Q7FGZ2.3|RH1_ARATH RecName:
           Full=DEAD-box ATP-dependent RNA helicase 1
           gi|332658259|gb|AEE83659.1| RNA helicase 1 [Arabidopsis
           thaliana]
          Length = 522

 Score =  140 bits (353), Expect = 1e-31
 Identities = 69/85 (81%), Positives = 80/85 (94%)
 Frame = +1

Query: 1   PTGSGKTLAYALPIVQMLSTRSVKCIRALVVLPTRDLALQVKQVFASIAPAVGLSVGLAV 180
           PTGSGKTL+YALPIVQ+L++R V+C+RALVVLPTRDLALQVK VF +IAPAVGLSVG AV
Sbjct: 80  PTGSGKTLSYALPIVQLLASRPVRCLRALVVLPTRDLALQVKDVFDAIAPAVGLSVGSAV 139

Query: 181 GQTSIAGEISELIKRPKLEAGVCYD 255
           GQ+SIAGEIS+LIK PKL+AG+CYD
Sbjct: 140 GQSSIAGEISQLIKTPKLDAGICYD 164