BLASTX nr result

ID: Coptis21_contig00025020 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00025020
         (368 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330632.1| predicted protein [Populus trichocarpa] gi|2...    39   2e-06
ref|XP_004154600.1| PREDICTED: LOW QUALITY PROTEIN: callose synt...    41   3e-06
ref|XP_004140034.1| PREDICTED: callose synthase 12-like [Cucumis...    41   3e-06

>ref|XP_002330632.1| predicted protein [Populus trichocarpa] gi|222872236|gb|EEF09367.1|
            predicted protein [Populus trichocarpa]
          Length = 1497

 Score = 39.3 bits (90), Expect(2) = 2e-06
 Identities = 17/29 (58%), Positives = 20/29 (68%)
 Frame = -2

Query: 364  WWYEEQNHL*TTNF*RNLSAIMLDLCFFF 278
            WWYEEQ+HL TT     L  ++LDL FFF
Sbjct: 1298 WWYEEQDHLRTTGLWGKLLDVILDLRFFF 1326



 Score = 37.4 bits (85), Expect(2) = 2e-06
 Identities = 27/85 (31%), Positives = 33/85 (38%)
 Frame = -1

Query: 275  YGRVYHLGIAHGSTSIAXXXXXXXXXXXXXXXXXXXYSDRENFDSK*HNYYQXXXXXXXX 96
            YG VY LGIA GSTSIA                      R  + +K H YY+        
Sbjct: 1329 YGIVYQLGIAAGSTSIAVYLLSWIYVVVAFGFFLMVAYARNKYAAKEHIYYRMVQFLIIV 1388

Query: 95   XXXXXXXXXLTFTELKSTDLFSVVL 21
                     L FT  K TD+F+ +L
Sbjct: 1389 LGIFVIIALLQFTSFKFTDVFTSLL 1413


>ref|XP_004154600.1| PREDICTED: LOW QUALITY PROTEIN: callose synthase 12-like [Cucumis
            sativus]
          Length = 1767

 Score = 41.2 bits (95), Expect(2) = 3e-06
 Identities = 17/29 (58%), Positives = 21/29 (72%)
 Frame = -2

Query: 364  WWYEEQNHL*TTNF*RNLSAIMLDLCFFF 278
            WWYEEQ+HL TT F   +  ++LDL FFF
Sbjct: 1562 WWYEEQDHLKTTGFWXKVLEVILDLRFFF 1590



 Score = 34.7 bits (78), Expect(2) = 3e-06
 Identities = 25/85 (29%), Positives = 33/85 (38%)
 Frame = -1

Query: 275  YGRVYHLGIAHGSTSIAXXXXXXXXXXXXXXXXXXXYSDRENFDSK*HNYYQXXXXXXXX 96
            YG VY LGI+ GSTSIA                      R+ + +K H YY+        
Sbjct: 1593 YGVVYQLGISAGSTSIAVYLLSWICVFVALATYVVVAYARDRYAAKEHIYYRLVQFLIII 1652

Query: 95   XXXXXXXXXLTFTELKSTDLFSVVL 21
                     L FT  K  D+F+ +L
Sbjct: 1653 LAIVVIVALLEFTAFKFRDIFTSLL 1677


>ref|XP_004140034.1| PREDICTED: callose synthase 12-like [Cucumis sativus]
          Length = 1767

 Score = 40.8 bits (94), Expect(2) = 3e-06
 Identities = 17/29 (58%), Positives = 21/29 (72%)
 Frame = -2

Query: 364  WWYEEQNHL*TTNF*RNLSAIMLDLCFFF 278
            WWYEEQ+HL TT F   +  ++LDL FFF
Sbjct: 1562 WWYEEQDHLKTTGFWGKVLEVILDLRFFF 1590



 Score = 34.7 bits (78), Expect(2) = 3e-06
 Identities = 25/85 (29%), Positives = 33/85 (38%)
 Frame = -1

Query: 275  YGRVYHLGIAHGSTSIAXXXXXXXXXXXXXXXXXXXYSDRENFDSK*HNYYQXXXXXXXX 96
            YG VY LGI+ GSTSIA                      R+ + +K H YY+        
Sbjct: 1593 YGVVYQLGISAGSTSIAVYLLSWICVFVALATYVVVAYARDRYAAKEHIYYRLVQFLIII 1652

Query: 95   XXXXXXXXXLTFTELKSTDLFSVVL 21
                     L FT  K  D+F+ +L
Sbjct: 1653 LAIVVIVALLEFTAFKFRDIFTSLL 1677


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