BLASTX nr result

ID: Coptis21_contig00025018 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00025018
         (897 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20108.3| unnamed protein product [Vitis vinifera]              238   1e-60
emb|CAN60218.1| hypothetical protein VITISV_006612 [Vitis vinifera]   235   1e-59
gb|AAG52564.1|AC010675_12 unknown protein; 6859-4829 [Arabidopsi...   228   2e-57
ref|XP_002331299.1| predicted protein [Populus trichocarpa] gi|2...   221   1e-55
dbj|BAB02646.1| Ac transposase-like protein [Arabidopsis thalian...   199   9e-49

>emb|CBI20108.3| unnamed protein product [Vitis vinifera]
          Length = 677

 Score =  238 bits (607), Expect = 1e-60
 Identities = 127/256 (49%), Positives = 172/256 (67%), Gaps = 18/256 (7%)
 Frame = -2

Query: 716 MEVSNETPXXXXXXXXXXXVWNDFERVKKGDVMVAICKHCNKKLSASATSGTSHLKNHLT 537
           ME+SNE+             WN FERV+K D+  A+C HCNK+LS S+ SGT+HL+NHL 
Sbjct: 1   MEISNESAIKKPKRLTSVV-WNHFERVRKADICYAVCIHCNKRLSGSSNSGTTHLRNHLM 59

Query: 536 RCRKRANRELNQKLLLVRGKQRDGSIKF-----------EQDYGPLDFKFDQEQ------ 408
           RC KR+N +++Q LL  + ++++G++             E++  P   KFDQEQ      
Sbjct: 60  RCLKRSNYDVSQ-LLAAKRRKKEGALSLTAINYDEGQRKEENIKPTILKFDQEQKKDEPI 118

Query: 407 NLLRLKFDQDRSRCDLARMIIVHEYPLSMVEHAGFRRFVTNLQPLFQPMSCEAVKSDCVQ 228
           NL  ++FDQ+RSR DLARMII+H YPL+MV H GF+ FV +LQPLF+  S  A++ DC++
Sbjct: 119 NLGSIRFDQERSRLDLARMIILHGYPLAMVNHVGFKVFVKDLQPLFEVNS--AIELDCME 176

Query: 227 IYGKEKQKVYEMLDKVPGRISLTADLCTSYQDNGYMCLTAHYFDESLLLQKKVLNFVMVD 48
           IYGKEKQKVYE++ +  GRI+L  D+ TS +   Y+CLTAHY DE   LQKK+LNFV +D
Sbjct: 177 IYGKEKQKVYEVMSRSHGRINLAVDMWTSPEQAEYLCLTAHYIDEDWKLQKKILNFVSLD 236

Query: 47  P-HSEQSLAEVINTCL 3
           P H+E  L+EVI  CL
Sbjct: 237 PSHTEDMLSEVIIKCL 252


>emb|CAN60218.1| hypothetical protein VITISV_006612 [Vitis vinifera]
          Length = 667

 Score =  235 bits (599), Expect = 1e-59
 Identities = 125/256 (48%), Positives = 171/256 (66%), Gaps = 18/256 (7%)
 Frame = -2

Query: 716 MEVSNETPXXXXXXXXXXXVWNDFERVKKGDVMVAICKHCNKKLSASATSGTSHLKNHLT 537
           ME+SNE+             WN FERV+K D+  A+C HCNK+LS S+ SGT+HL+NHL 
Sbjct: 1   MEISNESAIKKPKRLTSVV-WNHFERVRKADICYAVCIHCNKRLSGSSNSGTTHLRNHLM 59

Query: 536 RCRKRANRELNQKLLLVRGKQRDGSIKF-----------EQDYGPLDFKFDQEQ------ 408
           RC KR+N +++Q LL  + ++++G++             E++  P   KFDQEQ      
Sbjct: 60  RCLKRSNYDVSQ-LLAAKRRKKEGALSLTAINYDEGQRKEENIKPTILKFDQEQKKDEPI 118

Query: 407 NLLRLKFDQDRSRCDLARMIIVHEYPLSMVEHAGFRRFVTNLQPLFQPMSCEAVKSDCVQ 228
           NL  ++FDQ+RSR DLARMII+H YPL+MV H GF+ FV +LQPLF+  S  A++ DC++
Sbjct: 119 NLGSIRFDQERSRLDLARMIILHGYPLAMVNHVGFKVFVKDLQPLFEVNS--AIELDCME 176

Query: 227 IYGKEKQKVYEMLDKVPGRISLTADLCTSYQDNGYMCLTAHYFDESLLLQKKVLNFVMVD 48
           IYGKEKQKVYE++ +  GRI+L  D+ TS +   Y+CLTAHY DE   LQKK+LNF+ +D
Sbjct: 177 IYGKEKQKVYEVMSRSHGRINLAVDMWTSPEQAEYLCLTAHYIDEDWKLQKKILNFLSLD 236

Query: 47  P-HSEQSLAEVINTCL 3
           P H+E  L+E I  CL
Sbjct: 237 PSHTEDMLSEFIIKCL 252


>gb|AAG52564.1|AC010675_12 unknown protein; 6859-4829 [Arabidopsis thaliana]
          Length = 676

 Score =  228 bits (580), Expect = 2e-57
 Identities = 117/230 (50%), Positives = 163/230 (70%), Gaps = 12/230 (5%)
 Frame = -2

Query: 656 WNDFERVKKGDVMVAICKHCNKKLSASATSGTSHLKNHLTRCRKRANRELNQKL-LLVRG 480
           WNDF+RV+KG+  +AIC+HC K+LS S+ SGTSHL+NHL RCR+R N   N      V+G
Sbjct: 32  WNDFDRVRKGETYIAICRHCKKRLSGSSASGTSHLRNHLIRCRRRTNGNNNGVAQYFVKG 91

Query: 479 KQRDGS---IKFEQDYGPLDFKFDQEQ------NLLRLKFDQDRSRCDLARMIIVHEYPL 327
           K+++ +   IK E+    ++ +++ E+      N++ +  DQ R R DLARMII+H YPL
Sbjct: 92  KKKELANERIKDEEVLSVVNVRYEHEKEEHEDVNVVSMGLDQRRCRFDLARMIILHGYPL 151

Query: 326 SMVEHAGFRRFVTNLQPLFQPMSCEAVKSDCVQIYGKEKQKVYEMLDKVPGRISLTADLC 147
           SMVE  GFR F+ NLQPLF+ ++ E V+SDC++IY KEK K++E LDK+PG+IS++ D+ 
Sbjct: 152 SMVEDVGFRMFIGNLQPLFELVAFERVESDCMEIYAKEKHKIFEALDKLPGKISISVDVW 211

Query: 146 TSYQDNG-YMCLTAHYFDESLLLQKKVLNFVMVDP-HSEQSLAEVINTCL 3
           +   D+  ++CL AHY DE   L+K+VLNF MVDP HS + LAEVI TCL
Sbjct: 212 SGSGDSDEFLCLAAHYIDEGWELKKRVLNFFMVDPSHSGEMLAEVIMTCL 261


>ref|XP_002331299.1| predicted protein [Populus trichocarpa] gi|222873882|gb|EEF11013.1|
           predicted protein [Populus trichocarpa]
          Length = 662

 Score =  221 bits (564), Expect = 1e-55
 Identities = 119/258 (46%), Positives = 168/258 (65%), Gaps = 20/258 (7%)
 Frame = -2

Query: 716 MEVSNETPXXXXXXXXXXXVWNDFERVKKGDVMVAICKHCNKKLSASATSGTSHLKNHLT 537
           MEVSNE+             WN F+R++K DV  A+C HC+KKLS S+ SGT+HL+NHL 
Sbjct: 1   MEVSNESAIKKPKRLTSVV-WNHFQRIRKADVCYAVCVHCDKKLSGSSNSGTTHLRNHLM 59

Query: 536 RCRKRANRELNQKLLLVRGKQRDGSIKF-------------EQDYGPLDFKFDQEQ---- 408
           RC KR+N +++Q LL  + K++D S+               ++   P   KFD EQ    
Sbjct: 60  RCLKRSNYDVSQ-LLAAKKKKKDTSLSIANVNANYDETQRKDEYIKPTIIKFDHEQRKDE 118

Query: 407 --NLLRLKFDQDRSRCDLARMIIVHEYPLSMVEHAGFRRFVTNLQPLFQPMSCEAVKSDC 234
             +L   +FDQ++SR DLARMII+H YPL+MVEH GF+ FV NLQPLF+ +   +++  C
Sbjct: 119 IISLGSCRFDQEQSRLDLARMIILHGYPLTMVEHVGFKIFVKNLQPLFEFVPNSSIEVSC 178

Query: 233 VQIYGKEKQKVYEMLDKVPGRISLTADLCTSYQDNGYMCLTAHYFDESLLLQKKVLNFVM 54
           ++IY KEKQKVYEM++++ GRI+L  ++ +S ++  Y+CL AHY DE   LQ+K+LNFV 
Sbjct: 179 IEIYMKEKQKVYEMINRLHGRINLAVEMWSSPENAEYLCLIAHYIDEDWKLQQKILNFVT 238

Query: 53  VD-PHSEQSLAEVINTCL 3
           +D  H+E  L+EVI  CL
Sbjct: 239 LDSSHTEDMLSEVIINCL 256


>dbj|BAB02646.1| Ac transposase-like protein [Arabidopsis thaliana]
           gi|18176330|gb|AAL60024.1| unknown protein [Arabidopsis
           thaliana] gi|20465375|gb|AAM20091.1| unknown protein
           [Arabidopsis thaliana]
          Length = 662

 Score =  199 bits (505), Expect = 9e-49
 Identities = 101/234 (43%), Positives = 151/234 (64%), Gaps = 16/234 (6%)
 Frame = -2

Query: 656 WNDFERVKKGDVMVAICKHCNKKLSASATSGTSHLKNHLTRCRKRANRELNQKLLLVRGK 477
           WN FERV+K DV  A+C  CNKKLS S+ SGT+HL+NHL RC KR N +++Q L   R K
Sbjct: 21  WNYFERVRKADVCYAVCIQCNKKLSGSSNSGTTHLRNHLMRCLKRTNHDMSQLLTPKRRK 80

Query: 476 QRD----GSIKFEQDYGPLDF---KFDQEQNLLRL--------KFDQDRSRCDLARMIIV 342
           + +     +I F+      ++   KFDQ+Q    +        +F Q+RS+ DLARMII+
Sbjct: 81  KENPVTVATINFDDGQAKEEYLRPKFDQDQRRDEVVLSRGSGGRFSQERSQVDLARMIIL 140

Query: 341 HEYPLSMVEHAGFRRFVTNLQPLFQPMSCEAVKSDCVQIYGKEKQKVYEMLDKVPGRISL 162
           H YPL+MV+H GF+ F  NLQPLF+ +    ++  C++IY +EKQ+V   L+ + G+++L
Sbjct: 141 HNYPLAMVDHVGFKVFARNLQPLFEAVPNSTIEDSCMEIYIREKQRVQHTLNHLYGKVNL 200

Query: 161 TADLCTSYQDNGYMCLTAHYFDESLLLQKKVLNFVMVDP-HSEQSLAEVINTCL 3
           + ++ +S  ++ Y+CL ++Y DE   L + VLNF+ +DP H+E  L+EVI  CL
Sbjct: 201 SVEMWSSRDNSNYVCLASNYIDEEWRLHRNVLNFITLDPSHTEDMLSEVIIRCL 254


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