BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00025013
         (531 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276760.2| PREDICTED: probable ribosome biogenesis prot...   101   1e-38
ref|XP_002528990.1| conserved hypothetical protein [Ricinus comm...    96   2e-37
ref|XP_004163491.1| PREDICTED: ribosome biogenesis protein TSR3 ...    93   9e-36
ref|XP_004149142.1| PREDICTED: ribosome biogenesis protein TSR3 ...    91   3e-35
ref|XP_003558599.1| PREDICTED: probable ribosome biogenesis prot...    90   2e-34

>ref|XP_002276760.2| PREDICTED: probable ribosome biogenesis protein C16orf42 homolog
           [Vitis vinifera]
          Length = 302

 Score =  101 bits (252), Expect(2) = 1e-38
 Identities = 61/104 (58%), Positives = 67/104 (64%), Gaps = 13/104 (12%)
 Frame = -3

Query: 514 MGHSKPRRQRGHNYHESSHHRGQSSKFREPSREDQNENGDSLPTAQDE---------ANE 362
           MGH+K RR +GH       HRGQSS+F+EP RE      DSLPT Q           A E
Sbjct: 1   MGHNKARRFKGHQ-----SHRGQSSRFQEPLREY-----DSLPTDQVAMGFNFCAVAAEE 50

Query: 361 EGPLVPNIQLAMWDFGQCDAKKCTGRKLSRFGLLKE----LRVT 242
           E   VP +QLAMWDFGQCDAK+CTGRKLSRFGLLKE    LRVT
Sbjct: 51  EELSVPKVQLAMWDFGQCDAKRCTGRKLSRFGLLKESIRLLRVT 94



 Score = 83.6 bits (205), Expect(2) = 1e-38
 Identities = 38/45 (84%), Positives = 42/45 (93%)
 Frame = -2

Query: 137 GGIVLSPVGTQCVSKEDHLLMERKGLAVVDCSWARLSDVPFVKLR 3
           GGI LSPVG QCVSKED++L++RKGLAVVDCSWARLSDVPF KLR
Sbjct: 98  GGIALSPVGNQCVSKEDYILIKRKGLAVVDCSWARLSDVPFTKLR 142


>ref|XP_002528990.1| conserved hypothetical protein [Ricinus communis]
           gi|223531580|gb|EEF33409.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 285

 Score = 95.9 bits (237), Expect(2) = 2e-37
 Identities = 49/90 (54%), Positives = 60/90 (66%)
 Frame = -3

Query: 514 MGHSKPRRQRGHNYHESSHHRGQSSKFREPSREDQNENGDSLPTAQDEANEEGPLVPNIQ 335
           MGH+KPRR + H+      +RGQSS+     RED++   D +P       E+    P +Q
Sbjct: 1   MGHNKPRRSKSHH-----SNRGQSSRTNLLEREDESLPSDQVP------EEDTNSTPRVQ 49

Query: 334 LAMWDFGQCDAKKCTGRKLSRFGLLKELRV 245
           LAMWDFGQCDAK+CTGRKL RFGLLKELRV
Sbjct: 50  LAMWDFGQCDAKRCTGRKLGRFGLLKELRV 79



 Score = 85.5 bits (210), Expect(2) = 2e-37
 Identities = 39/45 (86%), Positives = 44/45 (97%)
 Frame = -2

Query: 137 GGIVLSPVGTQCVSKEDHLLMERKGLAVVDCSWARLSDVPFVKLR 3
           GGIVLSPVG+QCVSK+DH L++RKGLAVVDCSWARL+DVPFVKLR
Sbjct: 84  GGIVLSPVGSQCVSKQDHSLIKRKGLAVVDCSWARLNDVPFVKLR 128


>ref|XP_004163491.1| PREDICTED: ribosome biogenesis protein TSR3 homolog [Cucumis
           sativus]
          Length = 265

 Score = 92.8 bits (229), Expect(2) = 9e-36
 Identities = 52/90 (57%), Positives = 61/90 (67%)
 Frame = -3

Query: 514 MGHSKPRRQRGHNYHESSHHRGQSSKFREPSREDQNENGDSLPTAQDEANEEGPLVPNIQ 335
           M H+K RR + H+       RGQS++  +   ED+      LP   D ANEE P  PNIQ
Sbjct: 1   MSHNKTRRFKNHH-----PRRGQSTRGHKFIGEDE-----CLPV--DPANEEEPTRPNIQ 48

Query: 334 LAMWDFGQCDAKKCTGRKLSRFGLLKELRV 245
           LAMWDFGQCDAK+CTGRKL+RFGLLKELRV
Sbjct: 49  LAMWDFGQCDAKRCTGRKLARFGLLKELRV 78



 Score = 82.8 bits (203), Expect(2) = 9e-36
 Identities = 38/45 (84%), Positives = 41/45 (91%)
 Frame = -2

Query: 137 GGIVLSPVGTQCVSKEDHLLMERKGLAVVDCSWARLSDVPFVKLR 3
           GGIVLSPVG  CVSKEDH L+++KGLAVVDCSWARL DVPFVKLR
Sbjct: 83  GGIVLSPVGVNCVSKEDHSLLKQKGLAVVDCSWARLGDVPFVKLR 127


>ref|XP_004149142.1| PREDICTED: ribosome biogenesis protein TSR3 homolog [Cucumis
           sativus]
          Length = 265

 Score = 90.9 bits (224), Expect(2) = 3e-35
 Identities = 51/90 (56%), Positives = 60/90 (66%)
 Frame = -3

Query: 514 MGHSKPRRQRGHNYHESSHHRGQSSKFREPSREDQNENGDSLPTAQDEANEEGPLVPNIQ 335
           M H+K RR + H+       RGQS++  +   ED+      LP   D ANEE P  PNI 
Sbjct: 1   MSHNKTRRFKNHH-----PRRGQSTRGHKFIGEDE-----CLPV--DPANEEEPTRPNIH 48

Query: 334 LAMWDFGQCDAKKCTGRKLSRFGLLKELRV 245
           LAMWDFGQCDAK+CTGRKL+RFGLLKELRV
Sbjct: 49  LAMWDFGQCDAKRCTGRKLARFGLLKELRV 78



 Score = 82.8 bits (203), Expect(2) = 3e-35
 Identities = 38/45 (84%), Positives = 41/45 (91%)
 Frame = -2

Query: 137 GGIVLSPVGTQCVSKEDHLLMERKGLAVVDCSWARLSDVPFVKLR 3
           GGIVLSPVG  CVSKEDH L+++KGLAVVDCSWARL DVPFVKLR
Sbjct: 83  GGIVLSPVGVNCVSKEDHSLLKQKGLAVVDCSWARLGDVPFVKLR 127


>ref|XP_003558599.1| PREDICTED: probable ribosome biogenesis protein C16orf42 homolog
           [Brachypodium distachyon]
          Length = 271

 Score = 89.7 bits (221), Expect(2) = 2e-34
 Identities = 50/91 (54%), Positives = 58/91 (63%)
 Frame = -3

Query: 514 MGHSKPRRQRGHNYHESSHHRGQSSKFREPSREDQNENGDSLPTAQDEANEEGPLVPNIQ 335
           MG+S+ RR RG +          SS+  +      +  G SLP  +D   EE   VP IQ
Sbjct: 1   MGYSRHRRGRGSS---------SSSRRTKQEASCDDGPGTSLPRQEDSTEEESN-VPKIQ 50

Query: 334 LAMWDFGQCDAKKCTGRKLSRFGLLKELRVT 242
           LAMWDFGQCDAK+CTGRKLSRFGLLKELRVT
Sbjct: 51  LAMWDFGQCDAKRCTGRKLSRFGLLKELRVT 81



 Score = 81.6 bits (200), Expect(2) = 2e-34
 Identities = 36/45 (80%), Positives = 41/45 (91%)
 Frame = -2

Query: 137 GGIVLSPVGTQCVSKEDHLLMERKGLAVVDCSWARLSDVPFVKLR 3
           GG+VLSPVGT CVSKEDH ++++KGLAVVDCSWARL DVPF KLR
Sbjct: 85  GGVVLSPVGTHCVSKEDHPIVQQKGLAVVDCSWARLDDVPFAKLR 129