BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00025012
         (530 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524955.1| ubiquitin-protein ligase, putative [Ricinus ...   113   2e-23
ref|XP_002283956.2| PREDICTED: U-box domain-containing protein 4...   108   4e-22
ref|XP_003538329.1| PREDICTED: U-box domain-containing protein 4...   106   2e-21
ref|XP_003551173.1| PREDICTED: U-box domain-containing protein 4...   104   9e-21
ref|XP_002306495.1| predicted protein [Populus trichocarpa] gi|2...   101   8e-20

>ref|XP_002524955.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223535790|gb|EEF37452.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 799

 Score =  113 bits (282), Expect = 2e-23
 Identities = 77/176 (43%), Positives = 98/176 (55%), Gaps = 4/176 (2%)
 Frame = -2

Query: 520 RSLVHANLIPNYTVKTLIANWCKTNNVNIHDPVKSMNLNQSSALSSYACFG-PSESHILP 344
           ++L H NLIPNYTVK LIANWC++NNV + DPVKS++ NQ SAL  +A  G P  SH   
Sbjct: 244 QTLAHTNLIPNYTVKALIANWCESNNVKLPDPVKSVSFNQPSALLIHAESGTPRGSHGFY 303

Query: 343 RQNHPSARTNHVRSTSSLLENVLSSSGTDLGRKFPSHTSSDLEGVLNGEVGNGFGLDVCR 164
            + +        RST S   N +SSS        P H  S  +  L+G VGN  GLD+ R
Sbjct: 304 SRGNQPMSPESTRSTDSPDRNWISSS-VHRESTSPCHPRSTSDSSLSGIVGNEQGLDMAR 362

Query: 163 ISLGSSEDGDAKVEYRNMGSAGQPLAS---SKVDNPEANGSDEEFQRHSQNASVSS 5
           ISL SSE+    +E RN  S  +   S   ++V N    G +   Q HS+NAS SS
Sbjct: 363 ISLASSEERSVNLEGRNRDSGVRHSVSPSRNEVSNAVRVG-EPIAQSHSRNASASS 417


>ref|XP_002283956.2| PREDICTED: U-box domain-containing protein 4-like [Vitis vinifera]
          Length = 809

 Score =  108 bits (271), Expect = 4e-22
 Identities = 70/167 (41%), Positives = 93/167 (55%), Gaps = 4/167 (2%)
 Frame = -2

Query: 520 RSLVHANLIPNYTVKTLIANWCKTNNVNIHDPVKSMNLNQSSALSSYACFG-PSESHILP 344
           ++L H NLIPNYTVK LIANWC++NNV + DPVKS+NLNQSS L ++A  G P ++H +P
Sbjct: 282 QTLAHTNLIPNYTVKALIANWCESNNVKLPDPVKSLNLNQSSPLLAHAEPGAPRDAHNVP 341

Query: 343 --RQNHPSARTNHVRSTSSLLENVLSSSGTDLGRKFPSHTSSDLEGVLNGEVGNGFGLDV 170
             R + P +     R T S   N++SS G       PSH  S  EG L+G  GNG G D 
Sbjct: 342 HSRASQPMS-PESTRFTGSPGNNLVSSGGIHREGTSPSHPRSRSEGSLSGVAGNGHGSD- 399

Query: 169 CRISLGSSEDGDAKVEYRNMGSAGQP-LASSKVDNPEANGSDEEFQR 32
                         +E R+M S GQP    S+ ++  + G+D    R
Sbjct: 400 --------------IEDRSMDSVGQPSTLPSRKESSNSTGADANLCR 432


>ref|XP_003538329.1| PREDICTED: U-box domain-containing protein 4-like [Glycine max]
          Length = 838

 Score =  106 bits (264), Expect = 2e-21
 Identities = 70/175 (40%), Positives = 91/175 (52%), Gaps = 3/175 (1%)
 Frame = -2

Query: 520 RSLVHANLIPNYTVKTLIANWCKTNNVNIHDPVKSMNLNQSSALSSYACFG---PSESHI 350
           ++LVH NLIPNYTVK LIANWC++NNV + DP KS NLNQ+  L  Y   G    S   +
Sbjct: 282 QTLVHTNLIPNYTVKALIANWCESNNVQLVDPTKSTNLNQACVLHGYMESGTTRESPVFV 341

Query: 349 LPRQNHPSARTNHVRSTSSLLENVLSSSGTDLGRKFPSHTSSDLEGVLNGEVGNGFGLDV 170
             R N PS+  +    + S   N L+S GT      P H  S  EG L+G V NG  +D+
Sbjct: 342 HSRSNQPSSPESAGSRSFSSPANNLTSGGTQREGTSPLHPRSTSEGSLSGMV-NGQYMDL 400

Query: 169 CRISLGSSEDGDAKVEYRNMGSAGQPLASSKVDNPEANGSDEEFQRHSQNASVSS 5
            RIS    +D  A  +  ++ SA  P  S       +  S E+ Q H +  S SS
Sbjct: 401 ARISPEGLDDRSASSDESSVDSASHPSMSPSRRESSSAFSSEQSQTHIRAVSDSS 455


>ref|XP_003551173.1| PREDICTED: U-box domain-containing protein 4-like [Glycine max]
          Length = 841

 Score =  104 bits (259), Expect = 9e-21
 Identities = 70/175 (40%), Positives = 92/175 (52%), Gaps = 3/175 (1%)
 Frame = -2

Query: 520 RSLVHANLIPNYTVKTLIANWCKTNNVNIHDPVKSMNLNQSSALSSYACFGPS-ESHIL- 347
           ++LVH +LIPNYTVK LIANWC++NNV + DP KS NLNQ+S L  Y   G + ES +  
Sbjct: 285 QTLVHTHLIPNYTVKALIANWCESNNVQLVDPTKSTNLNQASVLHGYMESGTTRESPVFA 344

Query: 346 -PRQNHPSARTNHVRSTSSLLENVLSSSGTDLGRKFPSHTSSDLEGVLNGEVGNGFGLDV 170
             R N PS+  +    + S   N L+S GT      P H  S  EG   G V NG  +D+
Sbjct: 345 HSRSNQPSSPESARSCSFSSPANNLTSGGTQREGTSPLHPRSTSEGSFRGMV-NGQYMDL 403

Query: 169 CRISLGSSEDGDAKVEYRNMGSAGQPLASSKVDNPEANGSDEEFQRHSQNASVSS 5
            RIS    +D  A  +  ++ SA  P  S       +  S E+ Q H +  S SS
Sbjct: 404 ARISPEGLDDRSASSDESSVDSASHPSMSPSRRESSSAFSSEQSQTHIRAVSDSS 458


>ref|XP_002306495.1| predicted protein [Populus trichocarpa] gi|222855944|gb|EEE93491.1|
           predicted protein [Populus trichocarpa]
          Length = 822

 Score =  101 bits (251), Expect = 8e-20
 Identities = 72/175 (41%), Positives = 98/175 (56%), Gaps = 3/175 (1%)
 Frame = -2

Query: 520 RSLVHANLIPNYTVKTLIANWCKTNNVNIHDPVKSMNLNQSSALSSYACFGPSESHILPR 341
           ++L H NLI NYTVK LIANWC++NNV + DP+KSM+ NQ S L   +    SES+    
Sbjct: 284 QTLAHTNLITNYTVKALIANWCESNNVKLPDPIKSMSFNQPSPLLPIS----SESN---- 335

Query: 340 QNHPSARTNHVRSTSSLLENVLSSSGTDLGRKFPSHTSSDLEGVLNGEVGNGFGLDVCRI 161
                      ++T S  +N++SSSG       P H+ S  E  L+  VGNG GLD+ RI
Sbjct: 336 -----------QATGSPGQNMISSSGIQREGSSPLHSHSTSESSLSVIVGNGQGLDIARI 384

Query: 160 -SLGSSEDGDAKVEYRNMGSAGQPLAS-SKVDNPEANGSDEEF-QRHSQNASVSS 5
            SL SSE+  +  E RN+ S     AS S+ +   A  +D    Q H+++AS SS
Sbjct: 385 SSLTSSEERSSNSEERNLDSVHHCSASPSRKEVSTAVRADGLLSQNHNRSASASS 439