BLASTX nr result

ID: Coptis21_contig00025001 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00025001
         (329 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513883.1| conserved hypothetical protein [Ricinus comm...    76   2e-12
ref|XP_002285807.2| PREDICTED: uncharacterized protein LOC100252...    74   2e-11
emb|CBI19129.3| unnamed protein product [Vitis vinifera]               74   2e-11
ref|XP_002302279.1| predicted protein [Populus trichocarpa] gi|2...    71   1e-10
gb|AFK40825.1| unknown [Lotus japonicus]                               69   5e-10

>ref|XP_002513883.1| conserved hypothetical protein [Ricinus communis]
           gi|223546969|gb|EEF48466.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 172

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 38/42 (90%), Positives = 39/42 (92%), Gaps = 1/42 (2%)
 Frame = -3

Query: 327 IYMYRGDTAFCSLECRQQQMNQDERKEKCSLASNIE-TSSTV 205
           IYMYRGD+AFCSLECRQQQMNQDERKEKCSLAS  E TSSTV
Sbjct: 98  IYMYRGDSAFCSLECRQQQMNQDERKEKCSLASKKEVTSSTV 139


>ref|XP_002285807.2| PREDICTED: uncharacterized protein LOC100252409 [Vitis vinifera]
          Length = 208

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 33/40 (82%), Positives = 37/40 (92%)
 Frame = -3

Query: 327 IYMYRGDTAFCSLECRQQQMNQDERKEKCSLASNIETSST 208
           IYMYRGD+AFCSLECRQQQMNQDERKEKCSLAS  E +++
Sbjct: 157 IYMYRGDSAFCSLECRQQQMNQDERKEKCSLASKKEATAS 196


>emb|CBI19129.3| unnamed protein product [Vitis vinifera]
          Length = 131

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 33/40 (82%), Positives = 37/40 (92%)
 Frame = -3

Query: 327 IYMYRGDTAFCSLECRQQQMNQDERKEKCSLASNIETSST 208
           IYMYRGD+AFCSLECRQQQMNQDERKEKCSLAS  E +++
Sbjct: 80  IYMYRGDSAFCSLECRQQQMNQDERKEKCSLASKKEATAS 119


>ref|XP_002302279.1| predicted protein [Populus trichocarpa] gi|222844005|gb|EEE81552.1|
           predicted protein [Populus trichocarpa]
          Length = 140

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 33/40 (82%), Positives = 36/40 (90%)
 Frame = -3

Query: 327 IYMYRGDTAFCSLECRQQQMNQDERKEKCSLASNIETSST 208
           IYMYRGD+AFCSLECRQQQM+ DERKEKCSLAS  E+ ST
Sbjct: 84  IYMYRGDSAFCSLECRQQQMSLDERKEKCSLASKKESIST 123


>gb|AFK40825.1| unknown [Lotus japonicus]
          Length = 148

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 30/40 (75%), Positives = 35/40 (87%)
 Frame = -3

Query: 327 IYMYRGDTAFCSLECRQQQMNQDERKEKCSLASNIETSST 208
           IYMYRGD+AFCSLECRQQQMNQDERK+KC +AS  +  +T
Sbjct: 91  IYMYRGDSAFCSLECRQQQMNQDERKDKCCVASKKQVVAT 130


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