BLASTX nr result

ID: Coptis21_contig00024996 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024996
         (688 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525446.1| GATA transcription factor, putative [Ricinus...   131   1e-28
emb|CAN83570.1| hypothetical protein VITISV_041707 [Vitis vinifera]   127   3e-27
emb|CBI29927.3| unnamed protein product [Vitis vinifera]              125   8e-27
ref|XP_002282225.1| PREDICTED: GATA transcription factor 9-like ...   125   8e-27
ref|XP_002319169.1| predicted protein [Populus trichocarpa] gi|2...   110   2e-22

>ref|XP_002525446.1| GATA transcription factor, putative [Ricinus communis]
           gi|223535259|gb|EEF36936.1| GATA transcription factor,
           putative [Ricinus communis]
          Length = 171

 Score =  131 bits (329), Expect = 1e-28
 Identities = 86/189 (45%), Positives = 103/189 (54%), Gaps = 11/189 (5%)
 Frame = -3

Query: 545 MDFCRNVSVSGGLPSEYQPEQVI--SPAYSKLNGXXXXXXXSLDDLFPIQNTEGDVSLEW 372
           MDFCRNVSVS    SEY P++ +  SP+     G        LDDLF  QNTE D SLEW
Sbjct: 1   MDFCRNVSVS----SEYHPQEQVLQSPSLCSKFGAAITPASPLDDLFSAQNTEVDFSLEW 56

Query: 371 LSAFVEDCLSSSGNCIAAAPVISHEKIXXXXXXXXXXXXPSEKTLTSQVPSPFQEFSIPG 192
           LS FVEDCLSS+GNC+ A  V S   +              +K    + PS  ++F+IPG
Sbjct: 57  LSVFVEDCLSSTGNCLPAPAVSS--SVQNTNSAHKLTNTLQQK--PQETPSSLEKFAIPG 112

Query: 191 RARTKRKRSPTNPXXXXXXXXXXXXXKNQPSFH---------HVISSDPPLLHQEYWLAD 39
           +AR+KRKR+ +               +N P F          H  SSDPPLLHQ YWLAD
Sbjct: 113 KARSKRKRATS------------VKTRNNPLFSWSYSHHQALHFPSSDPPLLHQAYWLAD 160

Query: 38  SELINVPKK 12
           SELI VPKK
Sbjct: 161 SELI-VPKK 168


>emb|CAN83570.1| hypothetical protein VITISV_041707 [Vitis vinifera]
          Length = 620

 Score =  127 bits (318), Expect = 3e-27
 Identities = 87/179 (48%), Positives = 99/179 (55%)
 Frame = -3

Query: 548 VMDFCRNVSVSGGLPSEYQPEQVISPAYSKLNGXXXXXXXSLDDLFPIQNTEGDVSLEWL 369
           VMDF R VSVSG    EY  EQV S   SKL G        LDDLF  QNTE DVSLEWL
Sbjct: 321 VMDFYREVSVSG----EYPQEQVPSTVCSKLGGLSAGS---LDDLFSTQNTEVDVSLEWL 373

Query: 368 SAFVEDCLSSSGNCIAAAPVISHEKIXXXXXXXXXXXXPSEKTLTSQVPSPFQEFSIPGR 189
           S FVEDCLSS+GNC+ A   ++ +               S +    +  SP Q   IPG+
Sbjct: 374 SIFVEDCLSSTGNCLPAPKNVASDS----ATPKPSKPLQSMQKPQQKPSSPLQNLVIPGK 429

Query: 188 ARTKRKRSPTNPXXXXXXXXXXXXXKNQPSFHHVISSDPPLLHQEYWLADSELINVPKK 12
           AR+KRKR+ T               +NQ    H+ SSDPPLL Q YWLADSELI VPKK
Sbjct: 430 ARSKRKRA-TTITTSFSNWVHHLNPENQNL--HITSSDPPLLQQAYWLADSELI-VPKK 484


>emb|CBI29927.3| unnamed protein product [Vitis vinifera]
          Length = 265

 Score =  125 bits (314), Expect = 8e-27
 Identities = 86/178 (48%), Positives = 98/178 (55%)
 Frame = -3

Query: 545 MDFCRNVSVSGGLPSEYQPEQVISPAYSKLNGXXXXXXXSLDDLFPIQNTEGDVSLEWLS 366
           MDF R VSVSG    EY  EQV S   SKL G        LDDLF  QNTE DVSLEWLS
Sbjct: 1   MDFYREVSVSG----EYPQEQVPSTVCSKLGGLSAGS---LDDLFSTQNTEVDVSLEWLS 53

Query: 365 AFVEDCLSSSGNCIAAAPVISHEKIXXXXXXXXXXXXPSEKTLTSQVPSPFQEFSIPGRA 186
            FVEDCLSS+GNC+ A   ++ +               S +    +  SP Q   IPG+A
Sbjct: 54  IFVEDCLSSTGNCLPAPKNVASDS----ATPKPSKPLQSMQKPQQKPSSPLQNLVIPGKA 109

Query: 185 RTKRKRSPTNPXXXXXXXXXXXXXKNQPSFHHVISSDPPLLHQEYWLADSELINVPKK 12
           R+KRKR+ T               +NQ    H+ SSDPPLL Q YWLADSELI VPKK
Sbjct: 110 RSKRKRA-TTITTSFSNWVHHLNPENQNL--HITSSDPPLLQQAYWLADSELI-VPKK 163


>ref|XP_002282225.1| PREDICTED: GATA transcription factor 9-like [Vitis vinifera]
          Length = 299

 Score =  125 bits (314), Expect = 8e-27
 Identities = 86/178 (48%), Positives = 98/178 (55%)
 Frame = -3

Query: 545 MDFCRNVSVSGGLPSEYQPEQVISPAYSKLNGXXXXXXXSLDDLFPIQNTEGDVSLEWLS 366
           MDF R VSVSG    EY  EQV S   SKL G        LDDLF  QNTE DVSLEWLS
Sbjct: 1   MDFYREVSVSG----EYPQEQVPSTVCSKLGGLSAGS---LDDLFSTQNTEVDVSLEWLS 53

Query: 365 AFVEDCLSSSGNCIAAAPVISHEKIXXXXXXXXXXXXPSEKTLTSQVPSPFQEFSIPGRA 186
            FVEDCLSS+GNC+ A   ++ +               S +    +  SP Q   IPG+A
Sbjct: 54  IFVEDCLSSTGNCLPAPKNVASDS----ATPKPSKPLQSMQKPQQKPSSPLQNLVIPGKA 109

Query: 185 RTKRKRSPTNPXXXXXXXXXXXXXKNQPSFHHVISSDPPLLHQEYWLADSELINVPKK 12
           R+KRKR+ T               +NQ    H+ SSDPPLL Q YWLADSELI VPKK
Sbjct: 110 RSKRKRA-TTITTSFSNWVHHLNPENQNL--HITSSDPPLLQQAYWLADSELI-VPKK 163


>ref|XP_002319169.1| predicted protein [Populus trichocarpa] gi|222857545|gb|EEE95092.1|
           predicted protein [Populus trichocarpa]
          Length = 295

 Score =  110 bits (276), Expect = 2e-22
 Identities = 75/179 (41%), Positives = 97/179 (54%), Gaps = 6/179 (3%)
 Frame = -3

Query: 545 MDFCRNVSVSGGLPSEY-QPEQVIS--PAYSKLNGXXXXXXXS---LDDLFPIQNTEGDV 384
           MDFCRNV+VS    +EY Q E+V++  P  SKL         +   LDD F  QNTE D 
Sbjct: 1   MDFCRNVTVS----TEYHQQEKVLASPPPCSKLGAAAAALTATTSPLDDPFSAQNTEVDF 56

Query: 383 SLEWLSAFVEDCLSSSGNCIAAAPVISHEKIXXXXXXXXXXXXPSEKTLTSQVPSPFQEF 204
           S EWLS FVEDCLSS+GNC+  AP +  +K                K    + PS  ++ 
Sbjct: 57  SSEWLSVFVEDCLSSTGNCL-PAPTVEAQK---PNTEENPPKNWQRKPQDQEDPSSLKKL 112

Query: 203 SIPGRARTKRKRSPTNPXXXXXXXXXXXXXKNQPSFHHVISSDPPLLHQEYWLADSELI 27
            IPG++R+KR+R P +                  +F+++ SSDPPLL Q YWLADSELI
Sbjct: 113 VIPGKSRSKRRRLPGD----KTRNPLTSWCYTNQAFNNLTSSDPPLLQQTYWLADSELI 167


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