BLASTX nr result

ID: Coptis21_contig00024990 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024990
         (2449 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAE04660.2| OSJNBa0061G20.16 [Oryza sativa Japonica Group]         90   2e-15
emb|CAE02147.1| OSJNBa0081G05.2 [Oryza sativa Japonica Group] gi...    90   2e-15
gb|EEE60821.1| hypothetical protein OsJ_14430 [Oryza sativa Japo...    90   2e-15
emb|CAN77450.1| hypothetical protein VITISV_016971 [Vitis vinifera]    90   2e-15
emb|CCA66039.1| hypothetical protein [Beta vulgaris subsp. vulga...    89   6e-15

>emb|CAE04660.2| OSJNBa0061G20.16 [Oryza sativa Japonica Group]
          Length = 1285

 Score = 90.1 bits (222), Expect = 2e-15
 Identities = 71/282 (25%), Positives = 120/282 (42%), Gaps = 23/282 (8%)
 Frame = +3

Query: 261  QDMHRMWQTTGRIAMERLGREHVLLKFEKIEERQHVLSNGSWMLEGQILSIKEWRNDRYL 440
            +DM R W+    ++ + L     ++ F    + + VL  G W+  G  L + ++      
Sbjct: 187  EDMRRAWRLRAEMSYKSLKDNLFIVSFSAEGDHKFVLQGGPWLHRGDALLVADFNGLVSP 246

Query: 441  DEYSFEQVRFWVHVWDIPLEMINQVKVWKIGGELGKVVETDISCSPEFNQPIVCVRVEMD 620
                 E +  WV ++D+PL M+N+ +    G +LGKV E D+            +RV++ 
Sbjct: 247  SMVPLETMPIWVRIYDLPLVMMNKERGVIYGSKLGKVREVDVQEDGCNKHDFFRIRVDLP 306

Query: 621  VRERIQKEQRVKLET-GEELIVRF--KYEKLEVICYFCGVIGHDQYTCRIRNQHRYDILK 791
            V   +++   +K++  G E I RF  +YE++   C+FCG IGH    C  R  +  D L 
Sbjct: 307  VNRPLKRMLAIKIKVKGAEEIRRFNLRYERIPHFCFFCGFIGHSDKECEKRLANEEDPLM 366

Query: 792  SGGSQK--DIKPNFSSQLKANKFFNGIAFSGKQSFVIAGQPAKPK---------FEETPA 938
                 +   +KP F  ++   K F       K SF  AG  +             E+TP 
Sbjct: 367  FSAELRCSPLKP-FERKVSKVKAFQSYGVQRKLSFRGAGSASSSSAGQMQRVNIHEDTPP 425

Query: 939  ---------PERAKWEPSGCKSLAESNNLVGSSRRQHLQKQN 1037
                      +  K E S    LA+  NL+  S +   +K++
Sbjct: 426  RVDAFDGFDSKEGKGEESVDAQLADKANLLSVSEQNSSKKRS 467


>emb|CAE02147.1| OSJNBa0081G05.2 [Oryza sativa Japonica Group]
            gi|116309213|emb|CAH66305.1| OSIGBa0135K14.2 [Oryza
            sativa Indica Group] gi|116309230|emb|CAH66320.1|
            OSIGBa0150M16.3 [Oryza sativa Indica Group]
          Length = 1711

 Score = 90.1 bits (222), Expect = 2e-15
 Identities = 71/282 (25%), Positives = 120/282 (42%), Gaps = 23/282 (8%)
 Frame = +3

Query: 261  QDMHRMWQTTGRIAMERLGREHVLLKFEKIEERQHVLSNGSWMLEGQILSIKEWRNDRYL 440
            +DM R W+    ++ + L     ++ F    + + VL  G W+  G  L + ++      
Sbjct: 187  EDMRRAWRLRAEMSYKSLKDNLFIVSFSAEGDHKFVLQGGPWLHRGDALLVADFNGLVSP 246

Query: 441  DEYSFEQVRFWVHVWDIPLEMINQVKVWKIGGELGKVVETDISCSPEFNQPIVCVRVEMD 620
                 E +  WV ++D+PL M+N+ +    G +LGKV E D+            +RV++ 
Sbjct: 247  SMVPLETMPIWVRIYDLPLVMMNKERGVIYGSKLGKVREVDVQEDGCNKHDFFRIRVDLP 306

Query: 621  VRERIQKEQRVKLET-GEELIVRF--KYEKLEVICYFCGVIGHDQYTCRIRNQHRYDILK 791
            V   +++   +K++  G E I RF  +YE++   C+FCG IGH    C  R  +  D L 
Sbjct: 307  VNRPLKRMLAIKIKVKGAEEIRRFNLRYERIPHFCFFCGFIGHSDKECEKRLANEEDPLM 366

Query: 792  SGGSQK--DIKPNFSSQLKANKFFNGIAFSGKQSFVIAGQPAKPK---------FEETPA 938
                 +   +KP F  ++   K F       K SF  AG  +             E+TP 
Sbjct: 367  FSAELRCSPLKP-FERKVSKVKAFQSYGVQRKLSFRGAGSASSSSAGQMQRVNIHEDTPP 425

Query: 939  ---------PERAKWEPSGCKSLAESNNLVGSSRRQHLQKQN 1037
                      +  K E S    LA+  NL+  S +   +K++
Sbjct: 426  RVDAFDGFDSKEGKGEESVDAQLADKANLLSVSEQNSSKKRS 467


>gb|EEE60821.1| hypothetical protein OsJ_14430 [Oryza sativa Japonica Group]
          Length = 448

 Score = 90.1 bits (222), Expect = 2e-15
 Identities = 71/282 (25%), Positives = 120/282 (42%), Gaps = 23/282 (8%)
 Frame = +3

Query: 261  QDMHRMWQTTGRIAMERLGREHVLLKFEKIEERQHVLSNGSWMLEGQILSIKEWRNDRYL 440
            +DM R W+    ++ + L     ++ F    + + VL  G W+  G  L + ++      
Sbjct: 47   EDMRRAWRLRAEMSYKSLKDNLFIVSFSAEGDHKFVLQGGPWLHRGDALLVADFNGLVSP 106

Query: 441  DEYSFEQVRFWVHVWDIPLEMINQVKVWKIGGELGKVVETDISCSPEFNQPIVCVRVEMD 620
                 E +  WV ++D+PL M+N+ +    G +LGKV E D+            +RV++ 
Sbjct: 107  SMVPLETMPIWVRIYDLPLVMMNKERGVIYGSKLGKVREVDVQEDGCNKHDFFRIRVDLP 166

Query: 621  VRERIQKEQRVKLET-GEELIVRF--KYEKLEVICYFCGVIGHDQYTCRIRNQHRYDILK 791
            V   +++   +K++  G E I RF  +YE++   C+FCG IGH    C  R  +  D L 
Sbjct: 167  VNRPLKRMLAIKIKVKGAEEIRRFNLRYERIPHFCFFCGFIGHSDKECEKRLANEEDPLM 226

Query: 792  SGGSQK--DIKPNFSSQLKANKFFNGIAFSGKQSFVIAGQPAKPK---------FEETPA 938
                 +   +KP F  ++   K F       K SF  AG  +             E+TP 
Sbjct: 227  FSAELRCSPLKP-FERKVSKVKAFQSYGVQRKLSFRGAGSASSSSAGQMQRVNIHEDTPP 285

Query: 939  ---------PERAKWEPSGCKSLAESNNLVGSSRRQHLQKQN 1037
                      +  K E S    LA+  NL+  S +   +K++
Sbjct: 286  RVDAFDGFDSKEGKGEESVDAQLADKANLLSVSEQNSSKKRS 327


>emb|CAN77450.1| hypothetical protein VITISV_016971 [Vitis vinifera]
          Length = 652

 Score = 90.1 bits (222), Expect = 2e-15
 Identities = 43/160 (26%), Positives = 85/160 (53%)
 Frame = +3

Query: 276 MWQTTGRIAMERLGREHVLLKFEKIEERQHVLSNGSWMLEGQILSIKEWRNDRYLDEYSF 455
           +W+    I ++ + ++  L +F  I + + VL  G W  +  +L +   +          
Sbjct: 8   VWRPGKGICIKEINKQLFLFQFFHIVDLKRVLEGGPWTFDNHLLILHHLKQGAIPTAIPL 67

Query: 456 EQVRFWVHVWDIPLEMINQVKVWKIGGELGKVVETDISCSPEFNQPIVCVRVEMDVRERI 635
             V FW+ V+DIP+  ++     ++G  +GK V+ DI+ +    +  + +RV +DVR+ +
Sbjct: 68  FHVLFWIQVYDIPVGSMSLNVGKQLGNFIGKFVDYDINNNAGLWRNFMRIRVLLDVRQPL 127

Query: 636 QKEQRVKLETGEELIVRFKYEKLEVICYFCGVIGHDQYTC 755
           ++ ++++   GE  +V FKYE+L   CY CG++GH +  C
Sbjct: 128 KRWKKIRKPQGEWSLVHFKYERLSTFCYLCGMLGHSEKFC 167


>emb|CCA66039.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 488

 Score = 89.0 bits (219), Expect = 6e-15
 Identities = 46/183 (25%), Positives = 92/183 (50%), Gaps = 1/183 (0%)
 Frame = +3

Query: 210 LIGMLLGGTPLLLEKVGQDMHRMWQTTGRIAMERLGREHVLLKFEKIEERQHVLSNGSWM 389
           L+G +L    + L+ + + M ++W     + +  +     + +F   +++  +L    W+
Sbjct: 40  LVGKVLSTRAVNLDALKRVMTQIWSLNSNMVVRAIDSNSFIFQFFHWKDKAKILDGRPWL 99

Query: 390 LEGQILSIKEWRNDRYLDEYSFEQVRFWVHVWDIPLEMINQVKVWKIGGELGKVVETDIS 569
            + ++L I E   D    +   E   FWV ++++P    +  +V  I G LG V+E DI 
Sbjct: 100 FDQKLLVIDEILGDTQPSDVVLETSPFWVRIYNLPFNCRSDTEVRAIAGGLGPVLEVDID 159

Query: 570 CSPEFNQPIVC-VRVEMDVRERIQKEQRVKLETGEELIVRFKYEKLEVICYFCGVIGHDQ 746
              +F     C V+VE+++ + +++ QR++ + G    + +KYE+L   C+ CGV+GH  
Sbjct: 160 ---DFGLERFCRVKVELNIFKPLRRRQRIRRKDGAVASIDYKYERLPHFCFRCGVLGHGD 216

Query: 747 YTC 755
             C
Sbjct: 217 KDC 219


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