BLASTX nr result

ID: Coptis21_contig00024986 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024986
         (207 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270626.1| PREDICTED: methionyl-tRNA formyltransferase-...    59   5e-07
emb|CBI33563.3| unnamed protein product [Vitis vinifera]               59   5e-07
emb|CAN71122.1| hypothetical protein VITISV_004569 [Vitis vinifera]    59   5e-07
ref|XP_004157175.1| PREDICTED: methionyl-tRNA formyltransferase-...    55   5e-06
ref|XP_003569585.1| PREDICTED: methionyl-tRNA formyltransferase-...    55   6e-06

>ref|XP_002270626.1| PREDICTED: methionyl-tRNA formyltransferase-like [Vitis vinifera]
          Length = 365

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 26/35 (74%), Positives = 29/35 (82%)
 Frame = +3

Query: 102 DGVKEIGVSLVYTVRAMDVGPVIVCERVEVDDHVK 206
           DGVKE GVSL +TVRA+D GPVI CER EVDD +K
Sbjct: 168 DGVKETGVSLAFTVRALDAGPVIACERFEVDDQIK 202


>emb|CBI33563.3| unnamed protein product [Vitis vinifera]
          Length = 392

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 26/35 (74%), Positives = 29/35 (82%)
 Frame = +3

Query: 102 DGVKEIGVSLVYTVRAMDVGPVIVCERVEVDDHVK 206
           DGVKE GVSL +TVRA+D GPVI CER EVDD +K
Sbjct: 195 DGVKETGVSLAFTVRALDAGPVIACERFEVDDQIK 229


>emb|CAN71122.1| hypothetical protein VITISV_004569 [Vitis vinifera]
          Length = 382

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 26/35 (74%), Positives = 29/35 (82%)
 Frame = +3

Query: 102 DGVKEIGVSLVYTVRAMDVGPVIVCERVEVDDHVK 206
           DGVKE GVSL +TVRA+D GPVI CER EVDD +K
Sbjct: 103 DGVKETGVSLAFTVRALDAGPVIACERFEVDDQIK 137


>ref|XP_004157175.1| PREDICTED: methionyl-tRNA formyltransferase-like [Cucumis sativus]
          Length = 368

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 23/35 (65%), Positives = 30/35 (85%)
 Frame = +3

Query: 102 DGVKEIGVSLVYTVRAMDVGPVIVCERVEVDDHVK 206
           DGVKE GVSL +TVRA+D GP+I  E++EVD+H+K
Sbjct: 161 DGVKETGVSLAFTVRALDAGPIIASEKLEVDEHIK 195


>ref|XP_003569585.1| PREDICTED: methionyl-tRNA formyltransferase-like [Brachypodium
           distachyon]
          Length = 360

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 25/35 (71%), Positives = 27/35 (77%)
 Frame = +3

Query: 102 DGVKEIGVSLVYTVRAMDVGPVIVCERVEVDDHVK 206
           DGV E GVSL YTVRA+D GPVI CER  VDD +K
Sbjct: 165 DGVSETGVSLAYTVRALDAGPVIACERFSVDDCIK 199


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