BLASTX nr result

ID: Coptis21_contig00024979 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024979
         (473 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308870.1| predicted protein [Populus trichocarpa] gi|2...    61   8e-08

>ref|XP_002308870.1| predicted protein [Populus trichocarpa] gi|222854846|gb|EEE92393.1|
           predicted protein [Populus trichocarpa]
          Length = 1042

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 46/120 (38%), Positives = 66/120 (55%), Gaps = 4/120 (3%)
 Frame = +2

Query: 122 KASIQYPSLISKQNTLISKITDIQQPTLTSRSTPATIWLSESAVTASS--PSLRPNXXXX 295
           +AS +YP LI K +  I +ITD++  + T+ +    IWLSES++ +SS  P    +    
Sbjct: 50  EASSKYPYLIDK-SAFIGRITDVEAESSTT-ARGCKIWLSESSMVSSSLAPGSIVSVSLA 107

Query: 296 XXXXXXXXXXFGCSAV--DLLVDDEYDGLDKRRSNDAGCYFALARIFPSCKVLKNGMRLS 469
                     F  S+   +     E + +DK  +N+AG YFALA +FPSCKV KNG RLS
Sbjct: 108 AVERRFSSSSFPLSSFSYEWSRQCEVESVDKI-TNEAGNYFALATVFPSCKVSKNGARLS 166


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