BLASTX nr result

ID: Coptis21_contig00024960 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024960
         (214 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527186.1| nucleotide binding protein, putative [Ricinu...   134   1e-29
ref|XP_004166124.1| PREDICTED: WD repeat-containing protein 11-l...   132   2e-29
ref|XP_004150033.1| PREDICTED: WD repeat-containing protein 11-l...   132   2e-29
emb|CBI28216.3| unnamed protein product [Vitis vinifera]              132   2e-29
ref|XP_002282238.1| PREDICTED: WD repeat-containing protein 11-l...   132   2e-29

>ref|XP_002527186.1| nucleotide binding protein, putative [Ricinus communis]
           gi|223533451|gb|EEF35199.1| nucleotide binding protein,
           putative [Ricinus communis]
          Length = 1357

 Score =  134 bits (336), Expect = 1e-29
 Identities = 65/71 (91%), Positives = 68/71 (95%)
 Frame = +1

Query: 1   SQVNEKAGGYVNRLVVTCVRSGLNRTFRVLQKPERAPIRALRASSSGRYVLIMFRDAPVE 180
           SQVNEK GGY+NRLVVTCVRSGLNR FRVLQKPERAPIRALR SSSGRY+LI+FRDAPVE
Sbjct: 596 SQVNEKTGGYINRLVVTCVRSGLNRPFRVLQKPERAPIRALRTSSSGRYLLILFRDAPVE 655

Query: 181 VWAMTKSPIML 213
           VWAMTKSPIML
Sbjct: 656 VWAMTKSPIML 666


>ref|XP_004166124.1| PREDICTED: WD repeat-containing protein 11-like, partial [Cucumis
           sativus]
          Length = 844

 Score =  132 bits (333), Expect = 2e-29
 Identities = 63/71 (88%), Positives = 70/71 (98%)
 Frame = +1

Query: 1   SQVNEKAGGYVNRLVVTCVRSGLNRTFRVLQKPERAPIRALRASSSGRYVLIMFRDAPVE 180
           SQVNEK+GGY+NRLVVTC+RSG NRTFRV+QKPERAPIRALRASSSGRY+LI+FRDAPVE
Sbjct: 101 SQVNEKSGGYLNRLVVTCLRSGFNRTFRVMQKPERAPIRALRASSSGRYLLILFRDAPVE 160

Query: 181 VWAMTKSPIML 213
           VWAMTK+PIML
Sbjct: 161 VWAMTKTPIML 171


>ref|XP_004150033.1| PREDICTED: WD repeat-containing protein 11-like [Cucumis sativus]
          Length = 1327

 Score =  132 bits (333), Expect = 2e-29
 Identities = 63/71 (88%), Positives = 70/71 (98%)
 Frame = +1

Query: 1   SQVNEKAGGYVNRLVVTCVRSGLNRTFRVLQKPERAPIRALRASSSGRYVLIMFRDAPVE 180
           SQVNEK+GGY+NRLVVTC+RSG NRTFRV+QKPERAPIRALRASSSGRY+LI+FRDAPVE
Sbjct: 584 SQVNEKSGGYLNRLVVTCLRSGFNRTFRVMQKPERAPIRALRASSSGRYLLILFRDAPVE 643

Query: 181 VWAMTKSPIML 213
           VWAMTK+PIML
Sbjct: 644 VWAMTKTPIML 654


>emb|CBI28216.3| unnamed protein product [Vitis vinifera]
          Length = 1250

 Score =  132 bits (333), Expect = 2e-29
 Identities = 64/71 (90%), Positives = 68/71 (95%)
 Frame = +1

Query: 1   SQVNEKAGGYVNRLVVTCVRSGLNRTFRVLQKPERAPIRALRASSSGRYVLIMFRDAPVE 180
           +QVNEK GGY+NRLVVTCVRSGLNR FRVLQKPERAPIRALR SSSGRY+LI+FRDAPVE
Sbjct: 486 AQVNEKTGGYINRLVVTCVRSGLNRKFRVLQKPERAPIRALRTSSSGRYLLILFRDAPVE 545

Query: 181 VWAMTKSPIML 213
           VWAMTKSPIML
Sbjct: 546 VWAMTKSPIML 556


>ref|XP_002282238.1| PREDICTED: WD repeat-containing protein 11-like [Vitis vinifera]
          Length = 1317

 Score =  132 bits (333), Expect = 2e-29
 Identities = 64/71 (90%), Positives = 68/71 (95%)
 Frame = +1

Query: 1   SQVNEKAGGYVNRLVVTCVRSGLNRTFRVLQKPERAPIRALRASSSGRYVLIMFRDAPVE 180
           +QVNEK GGY+NRLVVTCVRSGLNR FRVLQKPERAPIRALR SSSGRY+LI+FRDAPVE
Sbjct: 553 AQVNEKTGGYINRLVVTCVRSGLNRKFRVLQKPERAPIRALRTSSSGRYLLILFRDAPVE 612

Query: 181 VWAMTKSPIML 213
           VWAMTKSPIML
Sbjct: 613 VWAMTKSPIML 623


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