BLASTX nr result

ID: Coptis21_contig00024954 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024954
         (250 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004163502.1| PREDICTED: uncharacterized protein LOC101229...    56   3e-06
ref|XP_004136301.1| PREDICTED: uncharacterized protein LOC101216...    56   3e-06
ref|XP_002283043.1| PREDICTED: uncharacterized protein LOC100242...    55   8e-06
ref|XP_002330816.1| predicted protein [Populus trichocarpa] gi|2...    54   1e-05

>ref|XP_004163502.1| PREDICTED: uncharacterized protein LOC101229760 [Cucumis sativus]
          Length = 967

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 28/49 (57%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
 Frame = +1

Query: 1   LNIRRAIIPAANGHCSXXXXXXXXXXXXXXXIIPPPH-THSEPALGSHP 144
           LN RRAIIPAANGHCS               +IPPPH + S+PALGSHP
Sbjct: 718 LNTRRAIIPAANGHCSARALARYYAALADGGVIPPPHSSSSQPALGSHP 766


>ref|XP_004136301.1| PREDICTED: uncharacterized protein LOC101216220 [Cucumis sativus]
          Length = 965

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 28/49 (57%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
 Frame = +1

Query: 1   LNIRRAIIPAANGHCSXXXXXXXXXXXXXXXIIPPPH-THSEPALGSHP 144
           LN RRAIIPAANGHCS               +IPPPH + S+PALGSHP
Sbjct: 716 LNTRRAIIPAANGHCSARALARYYAALADGGVIPPPHSSSSQPALGSHP 764


>ref|XP_002283043.1| PREDICTED: uncharacterized protein LOC100242392 [Vitis vinifera]
          Length = 978

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 27/49 (55%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
 Frame = +1

Query: 1   LNIRRAIIPAANGHCSXXXXXXXXXXXXXXXIIPPPH-THSEPALGSHP 144
           LNIRR+IIP+ANGHCS               I+PPPH T S+P LGSHP
Sbjct: 719 LNIRRSIIPSANGHCSARALARYYATLADGGILPPPHSTSSKPPLGSHP 767


>ref|XP_002330816.1| predicted protein [Populus trichocarpa] gi|222872618|gb|EEF09749.1|
           predicted protein [Populus trichocarpa]
          Length = 972

 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 27/49 (55%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
 Frame = +1

Query: 1   LNIRRAIIPAANGHCSXXXXXXXXXXXXXXXIIPPPHTH-SEPALGSHP 144
           LNIRRAIIPAANGHCS               ++PPPH+  S P LGSHP
Sbjct: 719 LNIRRAIIPAANGHCSARALARYYAALVDRGLVPPPHSSLSTPPLGSHP 767


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