BLASTX nr result

ID: Coptis21_contig00024947 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024947
         (995 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280371.1| PREDICTED: poly(ADP-ribose) glycohydrolase 1...   379   e-103
emb|CAN75808.1| hypothetical protein VITISV_004629 [Vitis vinifera]   370   e-100
ref|XP_003537791.1| PREDICTED: poly(ADP-ribose) glycohydrolase 1...   367   2e-99
ref|XP_002463535.1| hypothetical protein SORBIDRAFT_01g001560 [S...   359   5e-97
ref|XP_003599151.1| Poly(ADP-ribose) glycohydrolase [Medicago tr...   356   5e-96

>ref|XP_002280371.1| PREDICTED: poly(ADP-ribose) glycohydrolase 1 [Vitis vinifera]
            gi|296084375|emb|CBI24763.3| unnamed protein product
            [Vitis vinifera]
          Length = 562

 Score =  379 bits (973), Expect = e-103
 Identities = 189/316 (59%), Positives = 230/316 (72%), Gaps = 18/316 (5%)
 Frame = -3

Query: 993  VCH-----SGLIEDHLNEALEVDFANKYLGGGALSRGCVQEEIRFMINPELIVGMLFLPS 829
            +CH     SGLIED   EALEVDFAN+Y+GGGAL RGCVQEEIRFMINPELI GMLFLPS
Sbjct: 244  LCHFEVHRSGLIEDQSKEALEVDFANRYIGGGALRRGCVQEEIRFMINPELIAGMLFLPS 303

Query: 828  MSDNEAIEIVGAERFSNYSGYASTFRFSGDYLDRKPMDCMGRRRTRIIAIDALCSPKMRQ 649
            M+DNEAIE+VG ERFSNY+GYAS+F F+GDY+D++ +D MGRR+T++IAIDALC  +MRQ
Sbjct: 304  MADNEAIEVVGPERFSNYTGYASSFHFAGDYVDKRDVDFMGRRKTKMIAIDALCDMRMRQ 363

Query: 648  YGVDCLLREINKAFCGFFDESKYQLYQKLLEDDDFCKERLVK-------------QLHES 508
            Y ++CLLREINKAFCGFFD+SK Q YQ+L + D  C   L +              L E+
Sbjct: 364  YRLECLLREINKAFCGFFDQSKCQQYQRLFKGDGLCGAHLDQGVQGPDSISWNNLLLQEA 423

Query: 507  PSTVEGREEATRAEWIVNCHNGESRKNFDFNNIIGVVTGNWGCGAFGGDVELKAVIQWLA 328
            P    G  E    +  +     +   +      IGVVTGNWGCGAFGGD ELK +IQWLA
Sbjct: 424  PYASVGTNEGIYGDQQIRNAEEKGGHSLGHRYDIGVVTGNWGCGAFGGDPELKTIIQWLA 483

Query: 327  ASQALRPFILYYTFEEAALSCLDQLSRWILSHGWTVGDLWNMLLEYSSQRVKGETHCGFF 148
            ASQALRPFI Y+TF   AL  LD++ +WILSH WTVGDLW+ML+EYS+QR++GET  GFF
Sbjct: 484  ASQALRPFISYHTFGVEALKTLDKVIQWILSHKWTVGDLWDMLVEYSTQRLRGETSLGFF 543

Query: 147  NWLLPAMTIH*ITHLD 100
             WLLP+++    T +D
Sbjct: 544  TWLLPSLSAPDATMMD 559


>emb|CAN75808.1| hypothetical protein VITISV_004629 [Vitis vinifera]
          Length = 549

 Score =  370 bits (951), Expect = e-100
 Identities = 184/302 (60%), Positives = 221/302 (73%), Gaps = 18/302 (5%)
 Frame = -3

Query: 993  VCH-----SGLIEDHLNEALEVDFANKYLGGGALSRGCVQEEIRFMINPELIVGMLFLPS 829
            +CH     SGLIED   EALEVDFAN+Y+GGGAL RGCVQEEIRFMINPELI GMLFLPS
Sbjct: 214  LCHFEVHRSGLIEDQSKEALEVDFANRYIGGGALRRGCVQEEIRFMINPELIAGMLFLPS 273

Query: 828  MSDNEAIEIVGAERFSNYSGYASTFRFSGDYLDRKPMDCMGRRRTRIIAIDALCSPKMRQ 649
            M+DNEAIE+VG ERFSNY+GYAS+F F+GDY+D++ +D MGRR+T++IAIDALC  +MRQ
Sbjct: 274  MADNEAIEVVGPERFSNYTGYASSFHFAGDYVDKRDVDFMGRRKTKMIAIDALCDMRMRQ 333

Query: 648  YGVDCLLREINKAFCGFFDESKYQLYQKLLEDDDFCKERLVK-------------QLHES 508
            Y ++CLLREINKAFCGFFD+SK Q YQ+L + D  C   L +              L E+
Sbjct: 334  YRLECLLREINKAFCGFFDQSKCQQYQRLFKGDGLCGAHLDQGVQGPDSISWNNLLLQEA 393

Query: 507  PSTVEGREEATRAEWIVNCHNGESRKNFDFNNIIGVVTGNWGCGAFGGDVELKAVIQWLA 328
            P    G  E    +  +     +   +      IGVVTGNWGCGAFGGD ELK +IQWLA
Sbjct: 394  PYASVGTNEGIYGDQQIRNAEEKGGHSLGHRYDIGVVTGNWGCGAFGGDPELKTIIQWLA 453

Query: 327  ASQALRPFILYYTFEEAALSCLDQLSRWILSHGWTVGDLWNMLLEYSSQRVKGETHCGFF 148
            ASQALRPFI Y+TF   AL  LD++ +WILSH WTVGDLW+ML+EYS+QR++GET  GFF
Sbjct: 454  ASQALRPFISYHTFGVEALKTLDKVIQWILSHKWTVGDLWDMLVEYSTQRLRGETSLGFF 513

Query: 147  NW 142
             W
Sbjct: 514  TW 515


>ref|XP_003537791.1| PREDICTED: poly(ADP-ribose) glycohydrolase 1-like [Glycine max]
          Length = 547

 Score =  367 bits (943), Expect = 2e-99
 Identities = 183/289 (63%), Positives = 217/289 (75%)
 Frame = -3

Query: 984  SGLIEDHLNEALEVDFANKYLGGGALSRGCVQEEIRFMINPELIVGMLFLPSMSDNEAIE 805
            SGLIED  + A+EVDFANKYLGGGAL RGCVQEEIRFM++PEL+VGMLFLP+M+DNEAIE
Sbjct: 254  SGLIEDQSSGAVEVDFANKYLGGGALGRGCVQEEIRFMVSPELMVGMLFLPAMADNEAIE 313

Query: 804  IVGAERFSNYSGYASTFRFSGDYLDRKPMDCMGRRRTRIIAIDALCSPKMRQYGVDCLLR 625
            IVG ERFS+Y+GYAS+FRFSGDY+D + +D +GRR+TRI+AIDALCSP MRQY  + LLR
Sbjct: 314  IVGVERFSSYTGYASSFRFSGDYVDEREVDTLGRRKTRIVAIDALCSPGMRQYRANFLLR 373

Query: 624  EINKAFCGFFDESKYQLYQKLLEDDDFCKERLVKQLHESPSTVEGREEATRAEWIVNCHN 445
            EINKAFCGF  + KYQ YQK+L+++             S  T EG     +     N ++
Sbjct: 374  EINKAFCGFLYQCKYQPYQKILQENGCTSALFYAATSTSMETDEGEISNHKITNSQNDYH 433

Query: 444  GESRKNFDFNNIIGVVTGNWGCGAFGGDVELKAVIQWLAASQALRPFILYYTFEEAALSC 265
            G      D  N IGV TGNWGCGAFGGD E+K +IQWLAASQALRPFI YYTF   AL  
Sbjct: 434  G-----MDQGNNIGVATGNWGCGAFGGDPEVKTIIQWLAASQALRPFIAYYTFGLEALQS 488

Query: 264  LDQLSRWILSHGWTVGDLWNMLLEYSSQRVKGETHCGFFNWLLPAMTIH 118
            LD+++ WILS  WTVGDLWNML+EYS  R KGET+ GF  WLLP++  H
Sbjct: 489  LDEVAHWILSQRWTVGDLWNMLIEYSINRSKGETNVGFLQWLLPSIYGH 537


>ref|XP_002463535.1| hypothetical protein SORBIDRAFT_01g001560 [Sorghum bicolor]
            gi|241917389|gb|EER90533.1| hypothetical protein
            SORBIDRAFT_01g001560 [Sorghum bicolor]
          Length = 517

 Score =  359 bits (922), Expect = 5e-97
 Identities = 178/288 (61%), Positives = 210/288 (72%)
 Frame = -3

Query: 993  VCHSGLIEDHLNEALEVDFANKYLGGGALSRGCVQEEIRFMINPELIVGMLFLPSMSDNE 814
            V  SG IED   EAL+VDFANKYLGGGALSRGCVQEEIRFMINPELI+GMLF+ SM DNE
Sbjct: 251  VFSSGFIEDEEQEALQVDFANKYLGGGALSRGCVQEEIRFMINPELILGMLFMASMEDNE 310

Query: 813  AIEIVGAERFSNYSGYASTFRFSGDYLDRKPMDCMGRRRTRIIAIDALCSPKMRQYGVDC 634
            AIEI GAERFS Y GY S+FRF GDYLD KP D +GRRRTRI+AIDAL  P    Y  DC
Sbjct: 311  AIEIFGAERFSQYMGYGSSFRFVGDYLDTKPFDSVGRRRTRIVAIDALDCPARLHYESDC 370

Query: 633  LLREINKAFCGFFDESKYQLYQKLLEDDDFCKERLVKQLHESPSTVEGREEATRAEWIVN 454
            LLRE+NKAFCGFFD+SK QLY KL +D                                 
Sbjct: 371  LLREVNKAFCGFFDQSKCQLYVKLFQDS-------------------------------- 398

Query: 453  CHNGESRKNFDFNNIIGVVTGNWGCGAFGGDVELKAVIQWLAASQALRPFILYYTFEEAA 274
             HN ++  + + N  IGV TGNWGCGAFGG+ E+K++IQW+AASQALRPF+ YYTFE+A+
Sbjct: 399  -HNKDNFPSINSNEYIGVSTGNWGCGAFGGNPEIKSMIQWIAASQALRPFVNYYTFEDAS 457

Query: 273  LSCLDQLSRWILSHGWTVGDLWNMLLEYSSQRVKGETHCGFFNWLLPA 130
            L  L+++ +WIL HGWTV +LW+ML+EYSSQR++GET+ GFF WLLP+
Sbjct: 458  LERLEEVIQWILRHGWTVSELWHMLIEYSSQRLRGETYKGFFAWLLPS 505


>ref|XP_003599151.1| Poly(ADP-ribose) glycohydrolase [Medicago truncatula]
            gi|355488199|gb|AES69402.1| Poly(ADP-ribose)
            glycohydrolase [Medicago truncatula]
          Length = 529

 Score =  356 bits (913), Expect = 5e-96
 Identities = 180/292 (61%), Positives = 216/292 (73%), Gaps = 3/292 (1%)
 Frame = -3

Query: 984  SGLIEDHLNEALEVDFANKYLGGGALSRGCVQEEIRFMINPELIVGMLFLPSMSDNEAIE 805
            SGLIEDH +E +EVDFAN+YLGGGAL RGCVQEEIRFMI+PELI GM+FLPSM+DNEAI+
Sbjct: 252  SGLIEDHSSETVEVDFANEYLGGGALRRGCVQEEIRFMISPELIAGMIFLPSMADNEAID 311

Query: 804  IVGAERFSNYSGYASTFRFSGDYLDRKPMDCMGRRRTRIIAIDALCSPKMRQYGVDCLLR 625
            IVG ERFS+Y+GYAS+FRFSGDY+D K +D  GRR+TRI+AIDALC P MRQY    LLR
Sbjct: 312  IVGVERFSSYTGYASSFRFSGDYVDDKEVDPFGRRKTRIVAIDALCGPGMRQYREKFLLR 371

Query: 624  EINKAFCGFFDESKYQLYQKLLEDDDFCKERLVKQLHESPSTVEGREEATRAEWIVNCHN 445
            EINKAFCGF  +S+YQ  QK+ +++            ++  T EG+              
Sbjct: 372  EINKAFCGFLQQSQYQRDQKIPQEN-----------FDAMETSEGKYSYQEIR------- 413

Query: 444  GESRKNFDF---NNIIGVVTGNWGCGAFGGDVELKAVIQWLAASQALRPFILYYTFEEAA 274
              S+ ++D    +N IGV TGNWGCGAFGGD E+K +IQWLAASQA RPFI YYTF   A
Sbjct: 414  -NSQNDYDMMENSNDIGVATGNWGCGAFGGDPEVKTIIQWLAASQAGRPFIAYYTFGSGA 472

Query: 273  LSCLDQLSRWILSHGWTVGDLWNMLLEYSSQRVKGETHCGFFNWLLPAMTIH 118
            L  LD++S WILS GWTVGDLWNML+EYS+ R KGET+ GF  WLLP++  H
Sbjct: 473  LQNLDKVSCWILSQGWTVGDLWNMLVEYSTSRSKGETNVGFLQWLLPSIYDH 524


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