BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024943
         (557 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299746.1| predicted protein [Populus trichocarpa] gi|2...   165   5e-39
emb|CBI36035.3| unnamed protein product [Vitis vinifera]              160   2e-37
ref|XP_002277638.1| PREDICTED: DNA repair protein RadA homolog [...   160   2e-37
emb|CBI36034.3| unnamed protein product [Vitis vinifera]              157   1e-36
ref|XP_003531642.1| PREDICTED: DNA repair protein RadA homolog [...   155   5e-36

>ref|XP_002299746.1| predicted protein [Populus trichocarpa] gi|222847004|gb|EEE84551.1|
           predicted protein [Populus trichocarpa]
          Length = 525

 Score =  165 bits (417), Expect = 5e-39
 Identities = 79/106 (74%), Positives = 92/106 (86%)
 Frame = -3

Query: 552 NAIFVNVVSGVKLQETAGDLAIAAAVCSSFLDVPIPNDVAFIGEIGLAGELRPVPRMEKR 373
           NAIF+NVVSGV L ETAGD+AIAAA+CSSFL+ PIPN++AFIGEIGL GELR VPRMEKR
Sbjct: 418 NAIFLNVVSGVMLTETAGDVAIAAAICSSFLEFPIPNNIAFIGEIGLGGELRAVPRMEKR 477

Query: 372 VNALAKLGYKKCIVPQSTEKSLATLDLDGMMVLGCKNLKEVINNVF 235
           V+ +AKLGYK C++P+S EKSLA L   GM ++GCKNLKEVIN VF
Sbjct: 478 VHTVAKLGYKMCVIPKSAEKSLANLGFQGMKIVGCKNLKEVINTVF 523


>emb|CBI36035.3| unnamed protein product [Vitis vinifera]
          Length = 583

 Score =  160 bits (404), Expect = 2e-37
 Identities = 77/107 (71%), Positives = 92/107 (85%)
 Frame = -3

Query: 555 NNAIFVNVVSGVKLQETAGDLAIAAAVCSSFLDVPIPNDVAFIGEIGLAGELRPVPRMEK 376
           +N IF+NVVSGV L ETAGDLA+AAA+CSSFL+ PIPN +AFIGEIGL GELR VPRMEK
Sbjct: 476 DNGIFLNVVSGVTLAETAGDLAVAAAICSSFLEFPIPNGIAFIGEIGLGGELRTVPRMEK 535

Query: 375 RVNALAKLGYKKCIVPQSTEKSLATLDLDGMMVLGCKNLKEVINNVF 235
           RVN +AKLGYKKCIVP++ EKSL TL+   + ++GC+N+KEVIN VF
Sbjct: 536 RVNTVAKLGYKKCIVPKAAEKSLPTLEDMNIEIVGCRNMKEVINTVF 582


>ref|XP_002277638.1| PREDICTED: DNA repair protein RadA homolog [Vitis vinifera]
          Length = 624

 Score =  160 bits (404), Expect = 2e-37
 Identities = 77/107 (71%), Positives = 92/107 (85%)
 Frame = -3

Query: 555 NNAIFVNVVSGVKLQETAGDLAIAAAVCSSFLDVPIPNDVAFIGEIGLAGELRPVPRMEK 376
           +N IF+NVVSGV L ETAGDLA+AAA+CSSFL+ PIPN +AFIGEIGL GELR VPRMEK
Sbjct: 517 DNGIFLNVVSGVTLAETAGDLAVAAAICSSFLEFPIPNGIAFIGEIGLGGELRTVPRMEK 576

Query: 375 RVNALAKLGYKKCIVPQSTEKSLATLDLDGMMVLGCKNLKEVINNVF 235
           RVN +AKLGYKKCIVP++ EKSL TL+   + ++GC+N+KEVIN VF
Sbjct: 577 RVNTVAKLGYKKCIVPKAAEKSLPTLEDMNIEIVGCRNMKEVINTVF 623


>emb|CBI36034.3| unnamed protein product [Vitis vinifera]
          Length = 545

 Score =  157 bits (396), Expect = 1e-36
 Identities = 75/106 (70%), Positives = 92/106 (86%)
 Frame = -3

Query: 552 NAIFVNVVSGVKLQETAGDLAIAAAVCSSFLDVPIPNDVAFIGEIGLAGELRPVPRMEKR 373
           N IF+NVVSGV L ETAGDLA+AAA+CSSFL+ PIPN +AFIGEIGL GELR VPR+EKR
Sbjct: 439 NGIFLNVVSGVTLAETAGDLAVAAAICSSFLEFPIPNGIAFIGEIGLGGELRTVPRIEKR 498

Query: 372 VNALAKLGYKKCIVPQSTEKSLATLDLDGMMVLGCKNLKEVINNVF 235
           VN +AKLGYKKC+VP++ EKSL TL+   + ++GC+NLKEVI++VF
Sbjct: 499 VNTVAKLGYKKCVVPKAAEKSLPTLEDMNIEIVGCRNLKEVISSVF 544


>ref|XP_003531642.1| PREDICTED: DNA repair protein RadA homolog [Glycine max]
          Length = 560

 Score =  155 bits (391), Expect = 5e-36
 Identities = 77/111 (69%), Positives = 92/111 (82%)
 Frame = -3

Query: 552 NAIFVNVVSGVKLQETAGDLAIAAAVCSSFLDVPIPNDVAFIGEIGLAGELRPVPRMEKR 373
           +A+F+NVVSG+ L ETAGDLAIAAA+CSS L++PIPND+AFIGEIGL GELR VPRMEKR
Sbjct: 449 HAVFLNVVSGLALTETAGDLAIAAAICSSCLEIPIPNDIAFIGEIGLGGELRMVPRMEKR 508

Query: 372 VNALAKLGYKKCIVPQSTEKSLATLDLDGMMVLGCKNLKEVINNVFSG*MR 220
           V  +AKLGY+ CIVP+  EK+L T  L+ M V+GC+NLKEVIN VF   MR
Sbjct: 509 VYTVAKLGYRMCIVPKVAEKALGTEGLEKMEVVGCRNLKEVINTVFLNIMR 559