BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024937
         (626 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI35789.3| unnamed protein product [Vitis vinifera]              229   4e-58
ref|XP_002271048.1| PREDICTED: pentatricopeptide repeat-containi...   229   4e-58
ref|XP_002322098.1| predicted protein [Populus trichocarpa] gi|2...   214   8e-54
emb|CAN79606.1| hypothetical protein VITISV_027500 [Vitis vinifera]   213   3e-53
ref|XP_002529554.1| pentatricopeptide repeat-containing protein,...   211   1e-52

>emb|CBI35789.3| unnamed protein product [Vitis vinifera]
          Length = 912

 Score =  229 bits (583), Expect = 4e-58
 Identities = 107/168 (63%), Positives = 132/168 (78%)
 Frame = +2

Query: 122 WTKKIHTLCTTNNQVDEALGLLDRLRLHGYRPNSLNLNSITHALCDSKRYNEAHQRFLLS 301
           W++KIH LCT +  VDEAL LLD LRL GYRP+SLNL+SI HALCD+ R++EAH R LLS
Sbjct: 295 WSRKIHNLCTRDRNVDEALRLLDLLRLRGYRPDSLNLSSIIHALCDANRFSEAHHRLLLS 354

Query: 302 IASHSVPDARTCNVLISRLLAAKDPTQTMRVVRGLVVAKPGYIPSLIIYNRIIHQFCLLG 481
            ASH VPD RTCNVLI+RLL ++ P  T+ V RGL+ A+P ++PSLI YNR+IHQ C   
Sbjct: 355 FASHCVPDQRTCNVLIARLLDSRTPHATLHVFRGLIAARPEFVPSLINYNRLIHQLCSFS 414

Query: 482 LPNEAYRLFYDMKSNGHCPNTVSYTSLINGFCKNGQLGIAKKLFDEMV 625
            PNEA+ LF+DM+S GHCPN VSYT+LI+G+CK G+   A KLFDEM+
Sbjct: 415 QPNEAHGLFFDMRSRGHCPNAVSYTTLIDGYCKIGEETSAWKLFDEML 462



 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 44/165 (26%), Positives = 83/165 (50%), Gaps = 1/165 (0%)
 Frame = +2

Query: 134  IHTLCTTNNQVDEALGLLDRLRLHGYRPNSLNLNSITHALCDSKRYNEAHQRFL-LSIAS 310
            +  LC  NN   E L +L  +     +P+ + LN++ +  C   R  EA +    + +  
Sbjct: 657  LRALCLMNNPT-ELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRVEEALKVLDDMVMGK 715

Query: 311  HSVPDARTCNVLISRLLAAKDPTQTMRVVRGLVVAKPGYIPSLIIYNRIIHQFCLLGLPN 490
               PD+ T   +I  LL      + + V+R ++  K G+ P ++ +N ++H    L   N
Sbjct: 716  FCAPDSVTYTTIICGLLNLGRTEEALDVLRRVMPEK-GFKPGVVTFNAVLHGLFKLQQAN 774

Query: 491  EAYRLFYDMKSNGHCPNTVSYTSLINGFCKNGQLGIAKKLFDEMV 625
             A  +F  M S+G   NT++YT +I+G  ++ Q+  AK+ +D+++
Sbjct: 775  VATEVFNSMVSDGVAANTITYTIIIDGLFESDQIDEAKRFWDDVI 819



 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 39/144 (27%), Positives = 66/144 (45%)
 Frame = +2

Query: 194 LRLHGYRPNSLNLNSITHALCDSKRYNEAHQRFLLSIASHSVPDARTCNVLISRLLAAKD 373
           +R  G+ P+ ++ N I H L        A+Q     +    +    T  VL+  L    D
Sbjct: 571 MRKRGFFPSLVSYNYIVHGLSKEGGCMRAYQLLKEGVEFGYMMSEHTYKVLLEALCRDAD 630

Query: 374 PTQTMRVVRGLVVAKPGYIPSLIIYNRIIHQFCLLGLPNEAYRLFYDMKSNGHCPNTVSY 553
             +   V++ L++ K G +    IYN  +   CL+  P E   +   M      P+ ++ 
Sbjct: 631 LCKAREVMQ-LMLNKEG-VDQTRIYNIYLRALCLMNNPTELLNVLVFMLQTQCQPDVITL 688

Query: 554 TSLINGFCKNGQLGIAKKLFDEMV 625
            ++INGFCK G++  A K+ D+MV
Sbjct: 689 NTVINGFCKMGRVEEALKVLDDMV 712


>ref|XP_002271048.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g18020-like [Vitis vinifera]
          Length = 680

 Score =  229 bits (583), Expect = 4e-58
 Identities = 107/168 (63%), Positives = 132/168 (78%)
 Frame = +2

Query: 122 WTKKIHTLCTTNNQVDEALGLLDRLRLHGYRPNSLNLNSITHALCDSKRYNEAHQRFLLS 301
           W++KIH LCT +  VDEAL LLD LRL GYRP+SLNL+SI HALCD+ R++EAH R LLS
Sbjct: 63  WSRKIHNLCTRDRNVDEALRLLDLLRLRGYRPDSLNLSSIIHALCDANRFSEAHHRLLLS 122

Query: 302 IASHSVPDARTCNVLISRLLAAKDPTQTMRVVRGLVVAKPGYIPSLIIYNRIIHQFCLLG 481
            ASH VPD RTCNVLI+RLL ++ P  T+ V RGL+ A+P ++PSLI YNR+IHQ C   
Sbjct: 123 FASHCVPDQRTCNVLIARLLDSRTPHATLHVFRGLIAARPEFVPSLINYNRLIHQLCSFS 182

Query: 482 LPNEAYRLFYDMKSNGHCPNTVSYTSLINGFCKNGQLGIAKKLFDEMV 625
            PNEA+ LF+DM+S GHCPN VSYT+LI+G+CK G+   A KLFDEM+
Sbjct: 183 QPNEAHGLFFDMRSRGHCPNAVSYTTLIDGYCKIGEETSAWKLFDEML 230



 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 44/165 (26%), Positives = 83/165 (50%), Gaps = 1/165 (0%)
 Frame = +2

Query: 134 IHTLCTTNNQVDEALGLLDRLRLHGYRPNSLNLNSITHALCDSKRYNEAHQRFL-LSIAS 310
           +  LC  NN   E L +L  +     +P+ + LN++ +  C   R  EA +    + +  
Sbjct: 425 LRALCLMNNPT-ELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRVEEALKVLDDMVMGK 483

Query: 311 HSVPDARTCNVLISRLLAAKDPTQTMRVVRGLVVAKPGYIPSLIIYNRIIHQFCLLGLPN 490
              PD+ T   +I  LL      + + V+R ++  K G+ P ++ +N ++H    L   N
Sbjct: 484 FCAPDSVTYTTIICGLLNLGRTEEALDVLRRVMPEK-GFKPGVVTFNAVLHGLFKLQQAN 542

Query: 491 EAYRLFYDMKSNGHCPNTVSYTSLINGFCKNGQLGIAKKLFDEMV 625
            A  +F  M S+G   NT++YT +I+G  ++ Q+  AK+ +D+++
Sbjct: 543 VATEVFNSMVSDGVAANTITYTIIIDGLFESDQIDEAKRFWDDVI 587



 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 39/144 (27%), Positives = 66/144 (45%)
 Frame = +2

Query: 194 LRLHGYRPNSLNLNSITHALCDSKRYNEAHQRFLLSIASHSVPDARTCNVLISRLLAAKD 373
           +R  G+ P+ ++ N I H L        A+Q     +    +    T  VL+  L    D
Sbjct: 339 MRKRGFFPSLVSYNYIVHGLSKEGGCMRAYQLLKEGVEFGYMMSEHTYKVLLEALCRDAD 398

Query: 374 PTQTMRVVRGLVVAKPGYIPSLIIYNRIIHQFCLLGLPNEAYRLFYDMKSNGHCPNTVSY 553
             +   V++ L++ K G +    IYN  +   CL+  P E   +   M      P+ ++ 
Sbjct: 399 LCKAREVMQ-LMLNKEG-VDQTRIYNIYLRALCLMNNPTELLNVLVFMLQTQCQPDVITL 456

Query: 554 TSLINGFCKNGQLGIAKKLFDEMV 625
            ++INGFCK G++  A K+ D+MV
Sbjct: 457 NTVINGFCKMGRVEEALKVLDDMV 480


>ref|XP_002322098.1| predicted protein [Populus trichocarpa] gi|222869094|gb|EEF06225.1|
           predicted protein [Populus trichocarpa]
          Length = 668

 Score =  214 bits (546), Expect = 8e-54
 Identities = 99/167 (59%), Positives = 128/167 (76%)
 Frame = +2

Query: 122 WTKKIHTLCTTNNQVDEALGLLDRLRLHGYRPNSLNLNSITHALCDSKRYNEAHQRFLLS 301
           WT+KIH LCT +  VDEAL LLD LRL GY P+SLNL+SI H LCD+ R+NEAHQR ++ 
Sbjct: 52  WTQKIHDLCTKHRNVDEALRLLDHLRLRGYLPDSLNLSSIIHGLCDANRFNEAHQRLIIF 111

Query: 302 IASHSVPDARTCNVLISRLLAAKDPTQTMRVVRGLVVAKPGYIPSLIIYNRIIHQFCLLG 481
           + S  VPD RTCNVL++RLL +KDP +T+ V+  L+  KP ++PSLI YNR+I QFC + 
Sbjct: 112 LTSLCVPDERTCNVLVARLLHSKDPFRTLNVIHRLIEFKPEFVPSLINYNRLIDQFCSVS 171

Query: 482 LPNEAYRLFYDMKSNGHCPNTVSYTSLINGFCKNGQLGIAKKLFDEM 622
           LPN A+R+ YDM + GHCP+ VSYT+L+NG+ K G++  A KLFDEM
Sbjct: 172 LPNVAHRMLYDMINRGHCPSIVSYTTLVNGYSKIGEISDAYKLFDEM 218



 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 47/165 (28%), Positives = 82/165 (49%), Gaps = 1/165 (0%)
 Frame = +2

Query: 134 IHTLCTTNNQVDEALGLLDRLRLHGYRPNSLNLNSITHALCDSKRYNEAHQRFL-LSIAS 310
           +  LC  NN   E L +L  +     +P+ + LN++ +  C   R  EA +    +    
Sbjct: 414 LRALCLMNNPT-ELLNVLVSMLQTNCQPDVITLNTVINGFCKMGRVEEALKVLNDMMTGK 472

Query: 311 HSVPDARTCNVLISRLLAAKDPTQTMRVVRGLVVAKPGYIPSLIIYNRIIHQFCLLGLPN 490
            S PDA T   +IS LL      +   ++  L + + G  P ++ YN I+     L L  
Sbjct: 473 FSAPDAVTFTSIISGLLNVGRSQEARNLL--LQMLEKGITPGVVTYNAILRGLFKLQLTK 530

Query: 491 EAYRLFYDMKSNGHCPNTVSYTSLINGFCKNGQLGIAKKLFDEMV 625
           EA  +F +M ++G   N+ +Y+ ++ G C++GQ+  AKK +DE++
Sbjct: 531 EAMAVFDEMITDGVAANSQTYSIIVEGLCESGQIDGAKKFWDEVI 575



 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 39/144 (27%), Positives = 67/144 (46%)
 Frame = +2

Query: 194 LRLHGYRPNSLNLNSITHALCDSKRYNEAHQRFLLSIASHSVPDARTCNVLISRLLAAKD 373
           +R  G+ P+ ++ NSI H LC       A+Q     +    +    T  VL+  L  A D
Sbjct: 328 MRKKGFTPSVVSYNSIIHGLCKEGGCMRAYQLLEEGVGFGYLLSEYTYKVLVEALCQAMD 387

Query: 374 PTQTMRVVRGLVVAKPGYIPSLIIYNRIIHQFCLLGLPNEAYRLFYDMKSNGHCPNTVSY 553
             +   V++  V+   G +    IYN  +   CL+  P E   +   M      P+ ++ 
Sbjct: 388 LDKAREVLK--VMLNKGGMDRTRIYNIYLRALCLMNNPTELLNVLVSMLQTNCQPDVITL 445

Query: 554 TSLINGFCKNGQLGIAKKLFDEMV 625
            ++INGFCK G++  A K+ ++M+
Sbjct: 446 NTVINGFCKMGRVEEALKVLNDMM 469


>emb|CAN79606.1| hypothetical protein VITISV_027500 [Vitis vinifera]
          Length = 959

 Score =  213 bits (541), Expect = 3e-53
 Identities = 102/162 (62%), Positives = 125/162 (77%)
 Frame = +2

Query: 140 TLCTTNNQVDEALGLLDRLRLHGYRPNSLNLNSITHALCDSKRYNEAHQRFLLSIASHSV 319
           T  T +  VDEAL LLD LRL GYRP+SLNL+SI HALCD+ R++EAH R LLS ASH V
Sbjct: 359 TSSTRDRNVDEALRLLDLLRLRGYRPDSLNLSSIIHALCDANRFSEAHHRLLLSFASHCV 418

Query: 320 PDARTCNVLISRLLAAKDPTQTMRVVRGLVVAKPGYIPSLIIYNRIIHQFCLLGLPNEAY 499
           PD RTCNVLI+RLL ++ P  T+ V RGL+ A+P ++PSLI YNR+IHQ C    PNEA+
Sbjct: 419 PDQRTCNVLIARLLDSRTPHATLHVFRGLIAARPEFVPSLINYNRLIHQLCSFSQPNEAH 478

Query: 500 RLFYDMKSNGHCPNTVSYTSLINGFCKNGQLGIAKKLFDEMV 625
            LF+DM+S GHCPN VSYT+LI+G+CK G+   A KLFDEM+
Sbjct: 479 GLFFDMRSRGHCPNAVSYTTLIDGYCKIGEETSAWKLFDEML 520



 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 39/144 (27%), Positives = 66/144 (45%)
 Frame = +2

Query: 194  LRLHGYRPNSLNLNSITHALCDSKRYNEAHQRFLLSIASHSVPDARTCNVLISRLLAAKD 373
            +R  G+ P+ ++ N I H L        A+Q     +    +    T  VL+  L    D
Sbjct: 629  MRKRGFFPSLVSYNYIVHGLSKEGGCMRAYQLLKEGVEFGYMMSEHTYKVLLEALCRDAD 688

Query: 374  PTQTMRVVRGLVVAKPGYIPSLIIYNRIIHQFCLLGLPNEAYRLFYDMKSNGHCPNTVSY 553
              +   V++ L++ K G +    IYN  +   CL+  P E   +   M      P+ ++ 
Sbjct: 689  LCKAREVMQ-LMLNKEG-VDQTRIYNIYLRALCLMNNPTELLNVLVFMLQTQCQPDVITL 746

Query: 554  TSLINGFCKNGQLGIAKKLFDEMV 625
             ++INGFCK G++  A K+ D+MV
Sbjct: 747  NTVINGFCKMGRVEEALKVLDDMV 770


>ref|XP_002529554.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223530966|gb|EEF32823.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 678

 Score =  211 bits (536), Expect = 1e-52
 Identities = 102/167 (61%), Positives = 125/167 (74%)
 Frame = +2

Query: 122 WTKKIHTLCTTNNQVDEALGLLDRLRLHGYRPNSLNLNSITHALCDSKRYNEAHQRFLLS 301
           WTKKIH LCT   +VDEAL LLD LRL GYRP+SLN +SI HALCD+KR+ EAH RFLL 
Sbjct: 60  WTKKIHLLCTQQRKVDEALTLLDHLRLSGYRPDSLNFSSIIHALCDAKRFKEAHHRFLLC 119

Query: 302 IASHSVPDARTCNVLISRLLAAKDPTQTMRVVRGLVVAKPGYIPSLIIYNRIIHQFCLLG 481
           IAS  VPD RTCNVLI+RLL ++ P  T+ V+  L   KP ++PSLI YNR I+Q C   
Sbjct: 120 IASDCVPDERTCNVLIARLLDSQYPHATLHVLYRLFHVKPQFVPSLINYNRFIYQCCEFS 179

Query: 482 LPNEAYRLFYDMKSNGHCPNTVSYTSLINGFCKNGQLGIAKKLFDEM 622
            P+ A+RL +DM S GHCPN V++TSL+ G+C+ G++G A KLFDEM
Sbjct: 180 QPDVAHRLLFDMISRGHCPNVVTFTSLLTGYCRVGEVGNAYKLFDEM 226



 Score = 72.8 bits (177), Expect = 5e-11
 Identities = 48/165 (29%), Positives = 84/165 (50%), Gaps = 1/165 (0%)
 Frame = +2

Query: 134 IHTLCTTNNQVDEALGLLDRLRLHGYRPNSLNLNSITHALCDSKRYNEAHQRFL-LSIAS 310
           +  LC TN+   E L +L  +     +P+ + LN++ +  C   R  EA      +++  
Sbjct: 423 LRALCLTNSAT-ELLNVLVSMLQTECQPDVITLNTVVNGFCKMHRIEEALTILTDMTMGK 481

Query: 311 HSVPDARTCNVLISRLLAAKDPTQTMRVVRGLVVAKPGYIPSLIIYNRIIHQFCLLGLPN 490
              PDA T   +I+ LL A    + + ++  ++  K G  P +  YN +IH    L L  
Sbjct: 482 FCAPDAVTFTTIIAGLLNAGRSQEALNLLYKVMHEK-GISPGVETYNAVIHGLFKLQLAE 540

Query: 491 EAYRLFYDMKSNGHCPNTVSYTSLINGFCKNGQLGIAKKLFDEMV 625
           EA R F  M + G   ++ +YT +I+G C++G +  AKKL+D+++
Sbjct: 541 EAMRAFKRMLAAGVAADSKTYTLIIDGLCESGLIDKAKKLWDDVI 585



 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 37/143 (25%), Positives = 63/143 (44%)
 Frame = +2

Query: 194 LRLHGYRPNSLNLNSITHALCDSKRYNEAHQRFLLSIASHSVPDARTCNVLISRLLAAKD 373
           ++  G  P+ ++ NSI H LC  +    A+Q F   I    +P   T  VL+  L    D
Sbjct: 337 MKKKGLTPSLVSYNSIIHGLCKERGCMRAYQLFEEGIEFGYLPSEYTYKVLVEALCQEMD 396

Query: 374 PTQTMRVVRGLVVAKPGYIPSLIIYNRIIHQFCLLGLPNEAYRLFYDMKSNGHCPNTVSY 553
             +  R+V  + + K G +    IYN  +   CL     E   +   M      P+ ++ 
Sbjct: 397 LDKARRIVEAM-LNKDG-VDRTRIYNIYLRALCLTNSATELLNVLVSMLQTECQPDVITL 454

Query: 554 TSLINGFCKNGQLGIAKKLFDEM 622
            +++NGFCK  ++  A  +  +M
Sbjct: 455 NTVVNGFCKMHRIEEALTILTDM 477