BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024925
         (1340 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315980.1| predicted protein [Populus trichocarpa] gi|2...   238   2e-60
ref|XP_002514537.1| ubiquitin-protein ligase, putative [Ricinus ...   228   4e-57
ref|XP_003550361.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g...   226   1e-56
ref|XP_003588839.1| F-box/FBD/LRR-repeat protein [Medicago trunc...   225   2e-56
ref|XP_003589308.1| F-box/FBD/LRR-repeat protein [Medicago trunc...   225   2e-56

>ref|XP_002315980.1| predicted protein [Populus trichocarpa] gi|222865020|gb|EEF02151.1|
            predicted protein [Populus trichocarpa]
          Length = 420

 Score =  238 bits (608), Expect = 2e-60
 Identities = 146/420 (34%), Positives = 232/420 (55%), Gaps = 12/420 (2%)
 Frame = +3

Query: 87   ESLDMISSLPEGVMVDILHRLPIREAVKTSLLSSSWRYRWMSMPNLVFDARSLPSFSDLA 266
            E  D+IS LP+ ++  IL RLPIR+AV+TS+LSS WRYRW ++ +LVFD + +   SD  
Sbjct: 5    EDPDLISDLPQSILESILTRLPIRDAVRTSILSSKWRYRWTTLTHLVFDDKCIRMCSDRP 64

Query: 267  EAQKDSDQVKFVTNALLLHNGIISKFEVSNFLMHGCSDVDRWILVLSRENLNHLVLVFNQ 446
              +  +  V F+T AL LH G I KF++S   +  C D+D+WIL LSR ++  LVL   +
Sbjct: 65   VVE--NCMVNFITRALFLHQGPIHKFQLSTSYLQCCPDIDQWILFLSRSDIKELVLELGE 122

Query: 447  QNPYQVPACLFYCQTLRKLNLEGCIIKLPSQCHGFCNLTSLEIFRVTITNESLENLVVKS 626
               ++VP+CLF C+ L  L L  C    P    GF  L SL + +V +  E++E+L+   
Sbjct: 123  GEWFRVPSCLFNCKKLTCLELFRCEFDPPPTFKGFLCLRSLSLHQVLVAPEAIESLISGC 182

Query: 627  PLLQTLGIFFCVSLTRFNLNAPNLNVLCICGRFKNVNFQNIPNVTNATVGIKSN------ 788
            PLL++L + +  SL   N+ APNL  LC+ G F ++  +N P +   +V +  N      
Sbjct: 183  PLLESLALSYFDSLA-LNIRAPNLKYLCLEGEFTDICLENTPLLVAMSVAMYMNDEMAEC 241

Query: 789  ----PRCRLDEVLGGLRAIQDLCIFHPFLEFLKMDTAPERLNFNFDHLTALKL-AVNFEE 953
                 +C   + LGG+  ++ L     F ++L +   P  L   + HL  ++L  V+FE+
Sbjct: 242  FEQSSKCNFIKFLGGVPRLERLAGHIYFTKYLSIGDYPGSLAITYSHLKIIELYQVSFED 301

Query: 954  FKEIVAVLCLLRSSPFLKSLMVI-VICGRQSLLLYNTQFWEALLCKQDVFHSLETVSIVG 1130
             KEI  VL L+ +SP LK L +        S+   N +FW     K   F  L+ V +  
Sbjct: 302  MKEIRVVLRLIMNSPNLKELRISGSSTAVASVEAPNLEFWAKECPKDCTFKQLKVVKMTD 361

Query: 1131 FTGGLHECGFTKFILLKAMVLKTFTIKWEKSGLLPEGKLLVVEKMMQFQRSSTKAKVILS 1310
             +G  HE  F KF+L  + VL+T +I       + +G+L ++ ++++F+R+S +A++I +
Sbjct: 362  MSGVPHEMEFMKFLLANSPVLETMSI--TPCVYVMDGRLNMLIQLVRFRRASAEAEIIFT 419


>ref|XP_002514537.1| ubiquitin-protein ligase, putative [Ricinus communis]
            gi|223546141|gb|EEF47643.1| ubiquitin-protein ligase,
            putative [Ricinus communis]
          Length = 421

 Score =  228 bits (580), Expect = 4e-57
 Identities = 139/422 (32%), Positives = 232/422 (54%), Gaps = 15/422 (3%)
 Frame = +3

Query: 84   FESLDMISSLPEGVMVDILHRLPIREAVKTSLLSSSWRYRWMSMPNLVFDARSLPSFSDL 263
            +E  D I+ LP  ++  IL RLPIR+AVKTS+LS+ WRYRW ++ +LVFD + +  + D 
Sbjct: 4    YEVPDFITDLPSSIIESILTRLPIRDAVKTSILSTKWRYRWATLTHLVFDDKCVAMYCD- 62

Query: 264  AEAQKDSDQVKFVTNALLLHNGIISKFEVSNFLMHGCSDVDRWILVLSRENLNHLVLVFN 443
             +   +S  VKF++ AL LH+G I KF++S   +  C D+D+W+L LSR ++  LVL   
Sbjct: 63   -KGVLESRLVKFISRALFLHHGPIHKFQLSTSYLQCCPDIDQWLLFLSRSDIKELVLELG 121

Query: 444  QQNPYQVPACLFYCQTLRKLNLEGCIIKLPSQCHGFCNLTSLEIFRVTITNESLENLVVK 623
            +   ++VP+CLF C+ L +L L  C    P    GF  L SL +++V +  E++E+L+  
Sbjct: 122  EGEWFRVPSCLFNCKKLTRLELTRCEFDPPPNFKGFLCLKSLNLYQVLVAPEAIESLISG 181

Query: 624  SPLLQTLGIFFCVSLTRFNLNAPNLNVLCICGRFKNVNFQNIPNVTNATVGI-------- 779
             PLL++L + +  SL   N+ APNL  LC+ G FK++  +N P +   ++ +        
Sbjct: 182  CPLLESLSLSYFDSLV-LNVRAPNLKYLCLEGEFKDICLENTPLLVAMSIAMYMTEDIAE 240

Query: 780  --KSNPRCRLDEVLGGLRAIQDLCIFHPFLEFLKMDTAPERLNFNFDHLTALKL-AVNFE 950
              + +  C   + LGG+  ++ L     F ++L +   P R    +  L  ++L  V+FE
Sbjct: 241  HFEQSSSCNFIKFLGGVPRLERLIGHIYFTKYLSIGDYPGRHPITYSCLKVIELYQVSFE 300

Query: 951  EFKEIVAVLCLLRSSPFLKSLMVIVICGRQSLLLY----NTQFWEALLCKQDVFHSLETV 1118
            + KEI  VL L+ +SP LK L    I G  + L      +  FW     +   F  L  V
Sbjct: 301  DMKEIHVVLRLITNSPNLKELQ---ISGSSNTLAAVEAPDLDFWLKECPRNCTFEKLGVV 357

Query: 1119 SIVGFTGGLHECGFTKFILLKAMVLKTFTIKWEKSGLLPEGKLLVVEKMMQFQRSSTKAK 1298
             +   +G   E  F KF+L  + VL+  +I       + +G++ ++ ++++F+RSS +A+
Sbjct: 358  KLTDMSGVPQEMEFIKFLLANSPVLEMMSI--TPCVYVMDGRVNMLVELLKFRRSSAQAE 415

Query: 1299 VI 1304
            ++
Sbjct: 416  IL 417


>ref|XP_003550361.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g13570-like [Glycine max]
          Length = 427

 Score =  226 bits (576), Expect = 1e-56
 Identities = 144/413 (34%), Positives = 229/413 (55%), Gaps = 10/413 (2%)
 Frame = +3

Query: 96   DMISSLPEGVMVDILHRLPIREAVKTSLLSSSWRYRWMSMPNLVFDARSLPSFSDLAEAQ 275
            D IS LP  V+  +L  L IREAV+TS+LSS WRY+W ++P LVFD   +   S      
Sbjct: 17   DRISCLPGHVIDQVLSHLSIREAVRTSVLSSKWRYKWATLPILVFDTHCVSVASQDHMII 76

Query: 276  KDSDQVKFVTNALLLHNGIISKFEVSNFLMHGCSDVDRWILVLSRENLNHLVLVFNQQNP 455
            K+   ++ + + LLLH+G I+KF++S+  + G +D+DRW L L R+++   VL   +   
Sbjct: 77   KNK-LLRIIDHVLLLHSGPINKFKLSHRDLIGVTDIDRWTLHLCRKSIKEFVLEIWKGQR 135

Query: 456  YQVPACLFYCQTLRKLNLEGCIIKLPSQCHGFCNLTSLEIFRVTITNESLENLVVKSPLL 635
            Y++ +CLF CQ+L  L L  C +K PS   GF NL SL++  VT+  +  ENL+   PLL
Sbjct: 136  YKIHSCLFSCQSLTHLELFNCWLKPPSTFQGFKNLKSLDLQHVTLAQDVFENLISSCPLL 195

Query: 636  QTLGIFFCVSLTRFNLNAPNLNVLCICGRFKNVNFQNIPNVTNATVGIKSNPRCRLDEVL 815
            + L +      T  N++APNL    I G+F++++F+N   +   ++G+  N       + 
Sbjct: 196  ERLTLMNFDGFTNLNIDAPNLLFFDIGGKFEDISFENTFQLAVVSIGLYLNFEINQSRLH 255

Query: 816  GG----------LRAIQDLCIFHPFLEFLKMDTAPERLNFNFDHLTALKLAVNFEEFKEI 965
            GG          L  +Q L +   FL++L +   P +L      L+ L + +NF + KEI
Sbjct: 256  GGSSNLLKFFVHLPHVQRLEVQSYFLKYLAVGVVPIKLPRPCIDLSYLSIRINFNDLKEI 315

Query: 966  VAVLCLLRSSPFLKSLMVIVICGRQSLLLYNTQFWEALLCKQDVFHSLETVSIVGFTGGL 1145
             A LCLLRSSP L+ L ++     Q++LL +T  WE +     V   L  V I G +G  
Sbjct: 316  SASLCLLRSSPNLQELEILARPEEQTVLLTHTYCWEDVYFSCPVM-QLRYVKIDGISGIK 374

Query: 1146 HECGFTKFILLKAMVLKTFTIKWEKSGLLPEGKLLVVEKMMQFQRSSTKAKVI 1304
             E  F  F+LL + VL+  T+K      +    L +++++++F+R+S +A++I
Sbjct: 375  PELDFINFLLLHSPVLERMTVK-----PVANVGLELMKELLRFRRASGQAEII 422


>ref|XP_003588839.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
            gi|355477887|gb|AES59090.1| F-box/FBD/LRR-repeat protein
            [Medicago truncatula]
          Length = 532

 Score =  225 bits (574), Expect = 2e-56
 Identities = 152/431 (35%), Positives = 238/431 (55%), Gaps = 28/431 (6%)
 Frame = +3

Query: 96   DMISSLPEGVMVDILHRLPIREAVKTSLLSSSWRYRWMSMPNLVFDARSLPSFSDLAEAQ 275
            D IS LP  V+  IL  LPIREAVKTS+LSS WR +W ++PN+VFD   + +     EA 
Sbjct: 56   DRISCLPGHVIDQILSYLPIREAVKTSVLSSEWRNKWHTLPNIVFDLNCVSNI----EAI 111

Query: 276  KD-----SDQVKFVTNALLLHNGIISKFEVSNFLMHGC--------SDVDRWILVLSREN 416
            KD     S  ++ V + LLLH+G I+KF++S+    GC        +D+DRWIL L+ ++
Sbjct: 112  KDPSIFMSKLLRIVDHVLLLHSGPINKFQLSD---PGCDLSDVNSVADIDRWILRLTEKS 168

Query: 417  LNHLVL-VFNQQNPYQVPACLFYCQTLRKLNLEGCIIKLPSQCHGFCNLTSLEIFRVTIT 593
            +   VL +F  +  Y++P CLF CQ+L+ L L+ C I+ P+   GF NL SLE+++VT+ 
Sbjct: 169  IKEFVLQIFVAKKYYKIPQCLFSCQSLQNLKLDCCCIQPPTTFKGFKNLKSLELYQVTMA 228

Query: 594  NESLENLVVKSPLLQTLGIFFCVSLTRFNLNAPNLNVLCICGRFKNVNFQNIPNVTNATV 773
             ++ ENL+    LL+ L + +   LT+ N++APNL    I G F + +F N   +T   +
Sbjct: 229  QDAFENLISGCHLLEDLKLLYLEGLTQLNIHAPNLKKFLIVGDFVDFSFDNTFQLTELGL 288

Query: 774  -------------GIKSNPRCRLDEVLGGLRAIQDLCIFHPFLEFLKMDTAPERLNFNFD 914
                         G  SN    L      L  I+ L I   FL++L     P +L     
Sbjct: 289  FSFDSRSNHSQLRGCSSN----LLRFFAHLPHIESLVISSQFLKYLDAGDVPVKLPTPCI 344

Query: 915  HLTALKLAVNFEEFKEIVAVLCLLRSSPFLKSLMVIVICGRQSLLLYNTQF-WEALLCKQ 1091
            +L++L + + F + K+I+A LCLLRSSP L+ L +     + + LL    + W+ +  + 
Sbjct: 345  NLSSLFICIRFNDLKQILAALCLLRSSPNLRRLEIAAKLEKHTDLLTPASYCWKDVFLEP 404

Query: 1092 DVFHSLETVSIVGFTGGLHECGFTKFILLKAMVLKTFTIKWEKSGLLPEGKLLVVEKMMQ 1271
             V   +  VSI G +    E  F +F+L+ + +L+  T+K E   + PE    ++ K++Q
Sbjct: 405  PVPLRVRHVSIKGISDNTSELDFIRFLLMYSPMLEKMTVKLE-INVTPE----LMTKIIQ 459

Query: 1272 FQRSSTKAKVI 1304
            F+R+S +A+VI
Sbjct: 460  FKRASEQAEVI 470


>ref|XP_003589308.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
            gi|355478356|gb|AES59559.1| F-box/FBD/LRR-repeat protein
            [Medicago truncatula]
          Length = 428

 Score =  225 bits (573), Expect = 2e-56
 Identities = 148/414 (35%), Positives = 228/414 (55%), Gaps = 11/414 (2%)
 Frame = +3

Query: 96   DMISSLPEGVMVDILHRLPIREAVKTSLLSSSWRYRWMSMPNLVFDARSLPSFSDLAEAQ 275
            D ISSLP  ++  IL  LPI+EAV+TS+LS+ WRY+W ++PNLVFD++ +   S+     
Sbjct: 17   DRISSLPGHIIDQILSILPIKEAVRTSILSTKWRYKWATLPNLVFDSQCISDTSEDLLVI 76

Query: 276  KDSDQVKFVTNALLLHNGIISKFEVSNFLMHGCSDVDRWILVLSRENLNHLVLVFNQQNP 455
            K S   + + + LLLH+G I KF++S+  + G +D+DRW L L+R  +   VL   +   
Sbjct: 77   K-SKLSRIIDHVLLLHSGPIKKFKLSHRELIGVTDIDRWTLHLTRRPVKEFVLEIWKGQR 135

Query: 456  YQVPACLFYCQTLRKLNLEGCIIKLPSQCHGFCNLTSLEIFRVTITNESLENLVVKSPLL 635
            Y++P+CLF CQ L  L L  C +  PS   GF NL SL++  VT++ ++ ENL+   PLL
Sbjct: 136  YKIPSCLFSCQGLHHLELFNCWLIPPSTFQGFRNLKSLDLQHVTLSQDAFENLISTCPLL 195

Query: 636  QTLGIFFCVSLTRFNLNAPNLNVLCICGRFKNVNFQNIPNVTNATVGIKSN--------- 788
            + L +         N++APNL    I G+F++++F+N   +   ++G+  N         
Sbjct: 196  ERLTLMNFDGFNYLNIHAPNLQFFDIGGKFEDISFKNTSQLAVVSIGLYVNFESSQGRLH 255

Query: 789  -PRCRLDEVLGGLRAIQDLCIFHPFLEFLKMDTAPERLNFNFDHLTALKLAVNFEEFKEI 965
                 L E L  L  IQ L I   FL++L +   P +L      L+ L + +NF + KEI
Sbjct: 256  GRTSNLVEFLIHLPRIQRLEIQSYFLKYLALGAVPVKLPTPCIDLSYLSIRINFYDSKEI 315

Query: 966  VAVLCLLRSSPFLKSLMVIVICGRQSL-LLYNTQFWEALLCKQDVFHSLETVSIVGFTGG 1142
             A LCL RSSP L+ L ++     Q L L ++   WE +     V   +  V I G +G 
Sbjct: 316  SAALCLFRSSPNLRELEILARPEEQPLPLAHHADCWEDVYLDWPVMR-VRHVRIDGISGI 374

Query: 1143 LHECGFTKFILLKAMVLKTFTIKWEKSGLLPEGKLLVVEKMMQFQRSSTKAKVI 1304
              E  F  FILL + VL+  T+K       PE    +V+++++ +R+S +A+VI
Sbjct: 375  KPELDFISFILLYSPVLERMTVK-PALNASPE----LVKELLRLRRASGRAEVI 423