BLASTX nr result
ID: Coptis21_contig00024915
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00024915 (522 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002264741.2| PREDICTED: uncharacterized protein LOC100249... 103 1e-20 ref|XP_002526688.1| conserved hypothetical protein [Ricinus comm... 92 3e-17 ref|XP_002323031.1| predicted protein [Populus trichocarpa] gi|2... 90 2e-16 ref|XP_004147305.1| PREDICTED: uncharacterized protein LOC101203... 83 2e-14 ref|NP_187492.2| integrator complex subunit 4 [Arabidopsis thali... 82 6e-14 >ref|XP_002264741.2| PREDICTED: uncharacterized protein LOC100249976 [Vitis vinifera] Length = 1007 Score = 103 bits (258), Expect = 1e-20 Identities = 59/160 (36%), Positives = 80/160 (50%) Frame = +1 Query: 37 EATSAIVFVLRTVAATWPLIKSGSIDEIQRTLRSCKDELVTISVESNGSVGFLAFACQYL 216 E +I +L + W L++ G + E+ R LRS ++EL T +S S LAF QYL Sbjct: 619 EVAKSIKLILLKINDIWFLVQKGCMAEVLRMLRSFREELATYMSDSLVSADTLAFTFQYL 678 Query: 217 RVIKMLVKVCNHFLPPEKVNGGRTGXXXXXXXXXXXXXXXXRHQFLGFNXXXXXXXXXXX 396 RV+K+L KV HFLPP K R G R++F G + Sbjct: 679 RVVKLLAKVWEHFLPPRKTQSYRIGELNLLLGKLDRNLKEMRYRFRGLSKEEELHVLELI 738 Query: 397 XXNCVLRLSKPEICCRRTTLKKLCATMSNLELLCEKGFIK 516 C+LRLSK EICC TLKKL +S+ E L ++G I+ Sbjct: 739 LVTCILRLSKVEICCHNATLKKLSMIISHAEFLHKEGSIE 778 >ref|XP_002526688.1| conserved hypothetical protein [Ricinus communis] gi|223533988|gb|EEF35710.1| conserved hypothetical protein [Ricinus communis] Length = 890 Score = 92.4 bits (228), Expect = 3e-17 Identities = 55/154 (35%), Positives = 77/154 (50%) Frame = +1 Query: 61 VLRTVAATWPLIKSGSIDEIQRTLRSCKDELVTISVESNGSVGFLAFACQYLRVIKMLVK 240 + V W L+ S I +TLR+CK+EL +S+ G +AF QYL+V K+L K Sbjct: 564 IFAKVKDVWVLVHSSCISAALKTLRACKEELTMLSLALAEPTGVVAFMSQYLKVTKLLAK 623 Query: 241 VCNHFLPPEKVNGGRTGXXXXXXXXXXXXXXXXRHQFLGFNXXXXXXXXXXXXXNCVLRL 420 + + + KV G R +F+GF+ C+LRL Sbjct: 624 IWGNIV--WKVQSYEIGELEILLSKLERRLREMRSRFIGFSKEEESYVLELILVACILRL 681 Query: 421 SKPEICCRRTTLKKLCATMSNLELLCEKGFIKLS 522 SK EICC TTLK+L AT+S +E L E+G I+LS Sbjct: 682 SKAEICCYHTTLKRLSATISLIEFLHEEGSIELS 715 >ref|XP_002323031.1| predicted protein [Populus trichocarpa] gi|222867661|gb|EEF04792.1| predicted protein [Populus trichocarpa] Length = 949 Score = 89.7 bits (221), Expect = 2e-16 Identities = 54/158 (34%), Positives = 79/158 (50%), Gaps = 1/158 (0%) Frame = +1 Query: 37 EATSAIVFVLRTVAATWPLIKSGSIDEIQRTLR-SCKDELVTISVESNGSVGFLAFACQY 213 E ++ +L V W L++S + R LR CK EL ++ S S G LAF QY Sbjct: 611 EVMKSVNLILARVRDAWLLVQSRCTNVAVRALRLDCKRELAVLTSASLESAGILAFTMQY 670 Query: 214 LRVIKMLVKVCNHFLPPEKVNGGRTGXXXXXXXXXXXXXXXXRHQFLGFNXXXXXXXXXX 393 L+V+K+ K+ H + K+ TG R++++GF+ Sbjct: 671 LQVMKLFAKIWEHVV--WKIRSDETGGLEYLFGKLDVRLRELRYRYIGFSKEEELYVLEL 728 Query: 394 XXXNCVLRLSKPEICCRRTTLKKLCATMSNLELLCEKG 507 C+LRLSK EICC TTLKKL A +S++E+L +KG Sbjct: 729 IVVACMLRLSKVEICCSPTTLKKLSAIISHIEILNDKG 766 >ref|XP_004147305.1| PREDICTED: uncharacterized protein LOC101203415 [Cucumis sativus] gi|449501277|ref|XP_004161326.1| PREDICTED: uncharacterized protein LOC101225075 [Cucumis sativus] Length = 815 Score = 83.2 bits (204), Expect = 2e-14 Identities = 49/156 (31%), Positives = 75/156 (48%) Frame = +1 Query: 37 EATSAIVFVLRTVAATWPLIKSGSIDEIQRTLRSCKDELVTISVESNGSVGFLAFACQYL 216 +A ++ +L V WPLI+SG + E RTLR CK+ L + +N G LAF QYL Sbjct: 477 DAIESVKTILLKVQDIWPLIQSGVLHEALRTLRFCKEALGVFTYGTNKYNGALAFTLQYL 536 Query: 217 RVIKMLVKVCNHFLPPEKVNGGRTGXXXXXXXXXXXXXXXXRHQFLGFNXXXXXXXXXXX 396 +++K++ KV + + ++ RTG R +F G Sbjct: 537 KILKLVAKVWS-LMSSKRSYPRRTGEWGFLLGKLERGLKELRSRFTGLTKEEEQHILELM 595 Query: 397 XXNCVLRLSKPEICCRRTTLKKLCATMSNLELLCEK 504 C+LRLS E+CC T L+KL SN++ L ++ Sbjct: 596 LVTCILRLSNGEVCCHLTALRKLSTIASNIQHLLKE 631 >ref|NP_187492.2| integrator complex subunit 4 [Arabidopsis thaliana] gi|17473697|gb|AAL38305.1| unknown protein [Arabidopsis thaliana] gi|332641160|gb|AEE74681.1| integrator complex subunit 4 [Arabidopsis thaliana] Length = 936 Score = 81.6 bits (200), Expect = 6e-14 Identities = 54/162 (33%), Positives = 80/162 (49%) Frame = +1 Query: 37 EATSAIVFVLRTVAATWPLIKSGSIDEIQRTLRSCKDELVTISVESNGSVGFLAFACQYL 216 +A + +L + A W L +SG E R LR+CK EL T++ +S+ S G L F CQY+ Sbjct: 598 QALKFVNHILLKIKAAWLLSQSGCSKEALRALRACKQELATLTADSSISKGTLDFICQYV 657 Query: 217 RVIKMLVKVCNHFLPPEKVNGGRTGXXXXXXXXXXXXXXXXRHQFLGFNXXXXXXXXXXX 396 VI++LV+V HF ++ + R +F G + Sbjct: 658 HVIELLVQVWPHFNYSRHISTCSSVEVELLMEEVEIKLMEIRCRFTGLS-TEESLVLELV 716 Query: 397 XXNCVLRLSKPEICCRRTTLKKLCATMSNLELLCEKGFIKLS 522 C+LRL K EICCR + ++KL +T+S LEL E+ K S Sbjct: 717 IFGCLLRLYKFEICCRLSCMEKLSSTISQLELHHEQQCTKPS 758