BLASTX nr result

ID: Coptis21_contig00024915 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024915
         (522 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264741.2| PREDICTED: uncharacterized protein LOC100249...   103   1e-20
ref|XP_002526688.1| conserved hypothetical protein [Ricinus comm...    92   3e-17
ref|XP_002323031.1| predicted protein [Populus trichocarpa] gi|2...    90   2e-16
ref|XP_004147305.1| PREDICTED: uncharacterized protein LOC101203...    83   2e-14
ref|NP_187492.2| integrator complex subunit 4 [Arabidopsis thali...    82   6e-14

>ref|XP_002264741.2| PREDICTED: uncharacterized protein LOC100249976 [Vitis vinifera]
          Length = 1007

 Score =  103 bits (258), Expect = 1e-20
 Identities = 59/160 (36%), Positives = 80/160 (50%)
 Frame = +1

Query: 37   EATSAIVFVLRTVAATWPLIKSGSIDEIQRTLRSCKDELVTISVESNGSVGFLAFACQYL 216
            E   +I  +L  +   W L++ G + E+ R LRS ++EL T   +S  S   LAF  QYL
Sbjct: 619  EVAKSIKLILLKINDIWFLVQKGCMAEVLRMLRSFREELATYMSDSLVSADTLAFTFQYL 678

Query: 217  RVIKMLVKVCNHFLPPEKVNGGRTGXXXXXXXXXXXXXXXXRHQFLGFNXXXXXXXXXXX 396
            RV+K+L KV  HFLPP K    R G                R++F G +           
Sbjct: 679  RVVKLLAKVWEHFLPPRKTQSYRIGELNLLLGKLDRNLKEMRYRFRGLSKEEELHVLELI 738

Query: 397  XXNCVLRLSKPEICCRRTTLKKLCATMSNLELLCEKGFIK 516
               C+LRLSK EICC   TLKKL   +S+ E L ++G I+
Sbjct: 739  LVTCILRLSKVEICCHNATLKKLSMIISHAEFLHKEGSIE 778


>ref|XP_002526688.1| conserved hypothetical protein [Ricinus communis]
            gi|223533988|gb|EEF35710.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 890

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 55/154 (35%), Positives = 77/154 (50%)
 Frame = +1

Query: 61   VLRTVAATWPLIKSGSIDEIQRTLRSCKDELVTISVESNGSVGFLAFACQYLRVIKMLVK 240
            +   V   W L+ S  I    +TLR+CK+EL  +S+      G +AF  QYL+V K+L K
Sbjct: 564  IFAKVKDVWVLVHSSCISAALKTLRACKEELTMLSLALAEPTGVVAFMSQYLKVTKLLAK 623

Query: 241  VCNHFLPPEKVNGGRTGXXXXXXXXXXXXXXXXRHQFLGFNXXXXXXXXXXXXXNCVLRL 420
            +  + +   KV     G                R +F+GF+              C+LRL
Sbjct: 624  IWGNIV--WKVQSYEIGELEILLSKLERRLREMRSRFIGFSKEEESYVLELILVACILRL 681

Query: 421  SKPEICCRRTTLKKLCATMSNLELLCEKGFIKLS 522
            SK EICC  TTLK+L AT+S +E L E+G I+LS
Sbjct: 682  SKAEICCYHTTLKRLSATISLIEFLHEEGSIELS 715


>ref|XP_002323031.1| predicted protein [Populus trichocarpa] gi|222867661|gb|EEF04792.1|
            predicted protein [Populus trichocarpa]
          Length = 949

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 54/158 (34%), Positives = 79/158 (50%), Gaps = 1/158 (0%)
 Frame = +1

Query: 37   EATSAIVFVLRTVAATWPLIKSGSIDEIQRTLR-SCKDELVTISVESNGSVGFLAFACQY 213
            E   ++  +L  V   W L++S   +   R LR  CK EL  ++  S  S G LAF  QY
Sbjct: 611  EVMKSVNLILARVRDAWLLVQSRCTNVAVRALRLDCKRELAVLTSASLESAGILAFTMQY 670

Query: 214  LRVIKMLVKVCNHFLPPEKVNGGRTGXXXXXXXXXXXXXXXXRHQFLGFNXXXXXXXXXX 393
            L+V+K+  K+  H +   K+    TG                R++++GF+          
Sbjct: 671  LQVMKLFAKIWEHVV--WKIRSDETGGLEYLFGKLDVRLRELRYRYIGFSKEEELYVLEL 728

Query: 394  XXXNCVLRLSKPEICCRRTTLKKLCATMSNLELLCEKG 507
                C+LRLSK EICC  TTLKKL A +S++E+L +KG
Sbjct: 729  IVVACMLRLSKVEICCSPTTLKKLSAIISHIEILNDKG 766


>ref|XP_004147305.1| PREDICTED: uncharacterized protein LOC101203415 [Cucumis sativus]
           gi|449501277|ref|XP_004161326.1| PREDICTED:
           uncharacterized protein LOC101225075 [Cucumis sativus]
          Length = 815

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 49/156 (31%), Positives = 75/156 (48%)
 Frame = +1

Query: 37  EATSAIVFVLRTVAATWPLIKSGSIDEIQRTLRSCKDELVTISVESNGSVGFLAFACQYL 216
           +A  ++  +L  V   WPLI+SG + E  RTLR CK+ L   +  +N   G LAF  QYL
Sbjct: 477 DAIESVKTILLKVQDIWPLIQSGVLHEALRTLRFCKEALGVFTYGTNKYNGALAFTLQYL 536

Query: 217 RVIKMLVKVCNHFLPPEKVNGGRTGXXXXXXXXXXXXXXXXRHQFLGFNXXXXXXXXXXX 396
           +++K++ KV +  +  ++    RTG                R +F G             
Sbjct: 537 KILKLVAKVWS-LMSSKRSYPRRTGEWGFLLGKLERGLKELRSRFTGLTKEEEQHILELM 595

Query: 397 XXNCVLRLSKPEICCRRTTLKKLCATMSNLELLCEK 504
              C+LRLS  E+CC  T L+KL    SN++ L ++
Sbjct: 596 LVTCILRLSNGEVCCHLTALRKLSTIASNIQHLLKE 631


>ref|NP_187492.2| integrator complex subunit 4 [Arabidopsis thaliana]
            gi|17473697|gb|AAL38305.1| unknown protein [Arabidopsis
            thaliana] gi|332641160|gb|AEE74681.1| integrator complex
            subunit 4 [Arabidopsis thaliana]
          Length = 936

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 54/162 (33%), Positives = 80/162 (49%)
 Frame = +1

Query: 37   EATSAIVFVLRTVAATWPLIKSGSIDEIQRTLRSCKDELVTISVESNGSVGFLAFACQYL 216
            +A   +  +L  + A W L +SG   E  R LR+CK EL T++ +S+ S G L F CQY+
Sbjct: 598  QALKFVNHILLKIKAAWLLSQSGCSKEALRALRACKQELATLTADSSISKGTLDFICQYV 657

Query: 217  RVIKMLVKVCNHFLPPEKVNGGRTGXXXXXXXXXXXXXXXXRHQFLGFNXXXXXXXXXXX 396
             VI++LV+V  HF     ++   +                 R +F G +           
Sbjct: 658  HVIELLVQVWPHFNYSRHISTCSSVEVELLMEEVEIKLMEIRCRFTGLS-TEESLVLELV 716

Query: 397  XXNCVLRLSKPEICCRRTTLKKLCATMSNLELLCEKGFIKLS 522
               C+LRL K EICCR + ++KL +T+S LEL  E+   K S
Sbjct: 717  IFGCLLRLYKFEICCRLSCMEKLSSTISQLELHHEQQCTKPS 758


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