BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024913
         (746 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277373.1| PREDICTED: uncharacterized protein LOC100264...   255   6e-66
ref|NP_001236705.1| uncharacterized protein LOC100527229 [Glycin...   245   8e-63
ref|XP_003534490.1| PREDICTED: DNA-directed RNA polymerase I sub...   236   3e-60
ref|XP_002510510.1| conserved hypothetical protein [Ricinus comm...   233   2e-59
ref|XP_004147835.1| PREDICTED: DNA-directed RNA polymerase I sub...   224   1e-56

>ref|XP_002277373.1| PREDICTED: uncharacterized protein LOC100264366 [Vitis vinifera]
           gi|302142630|emb|CBI19833.3| unnamed protein product
           [Vitis vinifera]
          Length = 233

 Score =  255 bits (652), Expect = 6e-66
 Identities = 126/228 (55%), Positives = 170/228 (74%), Gaps = 6/228 (2%)
 Frame = -3

Query: 735 EVFKVSNTNLVVHIHPKKSKKVPQAIRDKLSTLLFKFNEVFDGVVLAYKVIEQNEDAKVL 556
           E  +VS+ NL+V++HP K+ +V QAI  +LS+LLFKFNE+FDGVVLAY V   ++DAK+L
Sbjct: 2   EGLRVSDANLIVYVHPSKANRVSQAILRELSSLLFKFNEIFDGVVLAYDVDIPSKDAKIL 61

Query: 555 TGVYPYLGIRLKVELLLFSPKPNMILEGKVVRLEKEKLHVIVLGFSTASIAEEDTREEFR 376
            G++PY G+RLK +LLLFSPKPNM++EGKVV+L +E +H++VLGFS+A I +E+ R EF+
Sbjct: 62  PGIHPYFGVRLKAKLLLFSPKPNMLIEGKVVKLAQESIHIVVLGFSSAIITDEEIRGEFK 121

Query: 375 YKNRKGEDVYASGSHRRHVIKVGSMIRFVVKSMDEETLHISGSLLPLYTGSIKWLDKQME 196
           YK + GE V+ S SH+RHVIKVG+MIRF+VKS+DEE LHISGSL P +TGSI WLDK++E
Sbjct: 122 YKIKHGEAVFVSRSHKRHVIKVGTMIRFLVKSLDEEILHISGSLNPPHTGSILWLDKKLE 181

Query: 195 ELPESERSVKKRKRESHYIGLSDEAALQ------TNDSHSKKSKRCKV 70
           +   S RS KKR+       + +   +        N  H KKSK+ K+
Sbjct: 182 DASPSSRSTKKRRENGESREMQEHDTVDGGVFSLDNSHHIKKSKKRKI 229


>ref|NP_001236705.1| uncharacterized protein LOC100527229 [Glycine max]
           gi|255631830|gb|ACU16282.1| unknown [Glycine max]
          Length = 232

 Score =  245 bits (625), Expect = 8e-63
 Identities = 130/230 (56%), Positives = 170/230 (73%), Gaps = 3/230 (1%)
 Frame = -3

Query: 735 EVFKVSNTNLVVHIHPKKSKKVPQAIRDKLSTLLFKFNEVFDGVVLAYKVIEQNEDAKVL 556
           E  KVS  NL V+IHP KS +V QA+  +LS+LLF F+E+FDGVVLAY V   +  AK+L
Sbjct: 2   EGLKVSKANLTVYIHPSKSNQVSQAVLRQLSSLLFTFSEIFDGVVLAYDVNSFDTCAKIL 61

Query: 555 TGVYPYLGIRLKVELLLFSPKPNMILEGKVVRLEKEKLHVIVLGFSTASIAEEDTREEFR 376
           +GV+PY G++LKV LLLFSPKPNM+LEGKVV++ +E +HV+VLGFS+A I+E+D REEF 
Sbjct: 62  SGVHPYFGVKLKVNLLLFSPKPNMLLEGKVVKVTQESIHVVVLGFSSAIISEKDIREEFV 121

Query: 375 YKNRKGEDVYASGSHRRHVIKVGSMIRFVVKSMDEETLHISGSLLPLYTGSIKWLDKQME 196
            K ++G++VY S SH+RHVIKVG+MIRF+VKS DEE LH+ GSL+P +TGSI WLDK +E
Sbjct: 122 CKTKRGQEVYVSRSHKRHVIKVGTMIRFLVKSFDEEILHVYGSLVPDHTGSIYWLDKNLE 181

Query: 195 ELPESERSVKKRKRESHYIGLSDEAA---LQTNDSHSKKSKRCKVVKNNE 55
               S+RS KKR+     I L  +A    L T +   +KSK+ K  K+ E
Sbjct: 182 VDSHSDRSEKKRRIVPERIMLEQDAVDGELSTLNI-GQKSKKSKKQKHQE 230


>ref|XP_003534490.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa43-like
           [Glycine max]
          Length = 232

 Score =  236 bits (603), Expect = 3e-60
 Identities = 127/226 (56%), Positives = 163/226 (72%), Gaps = 5/226 (2%)
 Frame = -3

Query: 735 EVFKVSNTNLVVHIHPKKSKKVPQAIRDKLSTLLFKFNEVFDGVVLAYKVIEQNEDAKVL 556
           E  KVS  NL  +IHP K+ +V Q I  +LS+LLFKF+E+F GVVLAY +   +  AK+L
Sbjct: 2   EGLKVSKANLTAYIHPSKTNQVSQPILRQLSSLLFKFSEIFHGVVLAYDLNSLHTCAKIL 61

Query: 555 TGVYPYLGIRLKVELLLFSPKPNMILEGKVVRLEKEKLHVIVLGFSTASIAEEDTREEFR 376
            GV+PY G++LKV LLLFSPKPNM+LEGKVV++ +E +HV+VLGFS+A I E+D REEF 
Sbjct: 62  PGVHPYFGVKLKVNLLLFSPKPNMLLEGKVVKVTQESIHVVVLGFSSAIITEKDIREEFV 121

Query: 375 YKNRKGEDVYASGSHRRHVIKVGSMIRFVVKSMDEETLHISGSLLPLYTGSIKWLDKQME 196
            K ++G++VYAS SH++HVIKVG+MIRF+VKS DEE LH+ GSL+P +TGSI WLDK +E
Sbjct: 122 CKTKRGQEVYASRSHKQHVIKVGTMIRFLVKSFDEEILHVYGSLVPDHTGSIYWLDKNLE 181

Query: 195 ELPESERSVKKRKRESHYIGLSDEAA---LQTND--SHSKKSKRCK 73
                 RS KKR+     I L  +A    L T D    SKKSK+ K
Sbjct: 182 ADSHVYRSKKKRRIVPERIMLEQDAVDGELSTLDIVQKSKKSKKQK 227


>ref|XP_002510510.1| conserved hypothetical protein [Ricinus communis]
           gi|223551211|gb|EEF52697.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 229

 Score =  233 bits (595), Expect = 2e-59
 Identities = 121/227 (53%), Positives = 162/227 (71%), Gaps = 6/227 (2%)
 Frame = -3

Query: 735 EVFKVSNTNLVVHIHPKKSKKVPQAIRDKLSTLLFKFNEVFDGVVLAYKVIEQNEDAKVL 556
           E   +S  NLVV++HP +SK V QAI  +LS+LLFKFNE FDGVVLAY     ++ A++L
Sbjct: 2   EGLSISEANLVVYVHPSQSKNVSQAILRELSSLLFKFNENFDGVVLAYAFNAPDKQARIL 61

Query: 555 TGVYPYLGIRLKVELLLFSPKPNMILEGKVVRLEKEKLHVIVLGFSTASIAEEDTREEFR 376
            GV+PY G+RL+  +L+FSPKP+M+LEGKVV++ +E +HVIVLGFS+A I +ED R+EFR
Sbjct: 62  CGVHPYFGVRLQATMLVFSPKPDMLLEGKVVKVTRESIHVIVLGFSSAIITDEDIRDEFR 121

Query: 375 YKNRKGEDVYASGSHRRHVIKVGSMIRFVVKSMDEETLHISGSLLPLYTGSIKWLDKQME 196
           YK + GE +Y S  H++HVIKVG+MIRFVVKS+DEETLHISGSL+P +TGSI WL+  M+
Sbjct: 122 YKRKHGEALYVSRPHKQHVIKVGTMIRFVVKSLDEETLHISGSLVPTHTGSISWLEGDMK 181

Query: 195 ELPESERSVKKRKRESHYIGLSDEA-----ALQTNDSHS-KKSKRCK 73
               ++   KKR +    I + +E          N  H  KKSK+ +
Sbjct: 182 N-TTTDSGNKKRTQLDGEIEVQEEGTAGGDTYSVNGDHEIKKSKKLR 227


>ref|XP_004147835.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa43-like
           [Cucumis sativus] gi|449476884|ref|XP_004154864.1|
           PREDICTED: DNA-directed RNA polymerase I subunit
           rpa43-like [Cucumis sativus]
          Length = 231

 Score =  224 bits (572), Expect = 1e-56
 Identities = 112/228 (49%), Positives = 164/228 (71%), Gaps = 7/228 (3%)
 Frame = -3

Query: 735 EVFKVSNTNLVVHIHPKKSKKVPQAIRDKLSTLLFKFNEVFDGVVLAYKVIEQNEDAKVL 556
           E  KVS+ N+VV++HP KSKK+ QA+  +L  +L KF+E F+GV+LAY+    +++AK+L
Sbjct: 2   EGLKVSDANMVVYVHPSKSKKISQAVLRELGAMLLKFDEKFEGVLLAYEAKIIDKNAKIL 61

Query: 555 TGVYPYLGIRLKVELLLFSPKPNMILEGKVVRLEKEKLHVIVLGFSTASIAEEDTREEFR 376
           +GV+PY G+ +K +LLLFSPKPNM+LEGKVV+L +E +HVIVLGF++A I  ED R+EF+
Sbjct: 62  SGVHPYFGVTIKAKLLLFSPKPNMLLEGKVVKLRQESIHVIVLGFASAVITYEDIRDEFK 121

Query: 375 YKNRKGEDVYASGSHRRHVIKVGSMIRFVVKSMDEETLHISGSLLPLYTGSIKWLDKQME 196
           ++ + GE+++ S +H+ H+IKVG+MIR +VKS DEE LHISGSL+P +TGSI WL+K   
Sbjct: 122 HRTKHGEEMFVSRAHKHHIIKVGTMIRLLVKSFDEEILHISGSLVPSHTGSIHWLEKNS- 180

Query: 195 ELPESERSVKKRKRESHYIGL-------SDEAALQTNDSHSKKSKRCK 73
              E   ++ KRK   +  G+       +D  A+  N+ H  K+K+ K
Sbjct: 181 --VEGSVTMSKRKMRENEGGVTLQDSVGTDVNAVILNNDHQPKTKKQK 226